RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 RARRES2Q99969 163 aa12.75□□□□□ -0.37
MSH6-203ENST00000420813 TMEM231Q9H6L2 316 aa12.75□□□□□ -0.37
MSH6-203ENST00000420813 COPZ2Q9P299 210 aa12.75□□□□□ -0.37
MSH6-203ENST00000420813 EXTL2Q9UBQ6 330 aa12.75□□□□□ -0.37
MSH6-203ENST00000420813 APOHP02749 345 aaPredicted RBP12.74□□□□□ -0.37
MSH6-203ENST00000420813 RNASE2P10153 161 aaKnown RBP12.74□□□□□ -0.37
MSH6-203ENST00000420813 UCP1P25874 307 aa12.74□□□□□ -0.37
MSH6-203ENST00000420813 PPP5CP53041 499 aa12.74□□□□□ -0.37
MSH6-203ENST00000420813 TRIM16LQ309B1 348 aa12.74□□□□□ -0.37
MSH6-203ENST00000420813 TMEM229BQ8NBD8 167 aa12.74□□□□□ -0.37
MSH6-203ENST00000420813 TERB2Q8NHR7 220 aa12.74□□□□□ -0.37
MSH6-203ENST00000420813 PHLDA1Q8WV24 401 aaPredicted RBP12.74□□□□□ -0.37
MSH6-203ENST00000420813 RRNAD1Q96FB5 475 aaKnown RBP12.74□□□□□ -0.37
MSH6-203ENST00000420813 MS4A6AQ9H2W1 248 aa12.74□□□□□ -0.37
MSH6-203ENST00000420813 C11orf68Q9H3H3 251 aaKnown RBP12.74□□□□□ -0.37
MSH6-203ENST00000420813 A0A1B0GU03 582 aa12.73□□□□□ -0.37
MSH6-203ENST00000420813 DNASE2O00115 360 aaPredicted RBP12.73□□□□□ -0.37
MSH6-203ENST00000420813 CLN5O75503 358 aa12.73□□□□□ -0.37
MSH6-203ENST00000420813 SCGB2A1O75556 95 aa12.73□□□□□ -0.37
MSH6-203ENST00000420813 CD74P04233 296 aa12.73□□□□□ -0.37
MSH6-203ENST00000420813 HOXA1P49639 335 aaPredicted RBP12.73□□□□□ -0.37
MSH6-203ENST00000420813 TAS2R19P59542 299 aa12.73□□□□□ -0.37
MSH6-203ENST00000420813 LILRB2Q8N423 598 aa12.73□□□□□ -0.37
MSH6-203ENST00000420813 ABHD1Q96SE0 405 aa12.73□□□□□ -0.37
MSH6-203ENST00000420813 MFFQ9GZY8 342 aa12.73□□□□□ -0.37
MSH6-203ENST00000420813 ENY2Q9NPA8 101 aa12.73□□□□□ -0.37
MSH6-203ENST00000420813 A0A1W2PS18 150 aa12.72□□□□□ -0.37
MSH6-203ENST00000420813 ETV6P41212 452 aa12.72□□□□□ -0.37
MSH6-203ENST00000420813 BSXQ3C1V8 233 aa12.72□□□□□ -0.37
MSH6-203ENST00000420813 AARDQ4LEZ3 155 aa12.72□□□□□ -0.37
MSH6-203ENST00000420813 FAM219AQ8IW50 185 aa12.72□□□□□ -0.37
MSH6-203ENST00000420813 OR4D10Q8NGI6 311 aa12.72□□□□□ -0.37
MSH6-203ENST00000420813 OR13C8Q8NGS7 320 aa12.72□□□□□ -0.37
MSH6-203ENST00000420813 OR11H2Q8NH07 326 aa12.72□□□□□ -0.37
MSH6-203ENST00000420813 OR4X1Q8NH49 305 aa12.72□□□□□ -0.37
MSH6-203ENST00000420813 FNDC4Q9H6D8 234 aaPredicted RBP12.72□□□□□ -0.37
MSH6-203ENST00000420813 RAB3DO95716 219 aa12.71□□□□□ -0.37
MSH6-203ENST00000420813 CA1P00915 261 aaPredicted RBP12.71□□□□□ -0.37
MSH6-203ENST00000420813 NPPCP23582 126 aa12.71□□□□□ -0.37
MSH6-203ENST00000420813 OPRK1P41145 380 aa12.71□□□□□ -0.37
MSH6-203ENST00000420813 DEFB131AP59861 70 aa12.71□□□□□ -0.37
MSH6-203ENST00000420813 RPL11P62913 178 aaKnown RBP12.71□□□□□ -0.37
MSH6-203ENST00000420813 SSBP1Q04837 148 aaKnown RBP12.71□□□□□ -0.37
MSH6-203ENST00000420813 SPCS2Q15005 226 aa12.71□□□□□ -0.37
MSH6-203ENST00000420813 SP6Q3SY56 376 aa12.71□□□□□ -0.37
MSH6-203ENST00000420813 SCGB2B2Q4G0G5 96 aa12.71□□□□□ -0.37
MSH6-203ENST00000420813 STEAP1BQ6NZ63 245 aa12.71□□□□□ -0.37
MSH6-203ENST00000420813 RNASE11Q8TAA1 199 aaKnown RBP12.71□□□□□ -0.37
MSH6-203ENST00000420813 METTL26Q96S19 204 aa12.71□□□□□ -0.37
MSH6-203ENST00000420813 MRPL36Q9P0J6 103 aaKnown RBP12.71□□□□□ -0.37
MSH6-203ENST00000420813 KMT2AQ03164 3969 aa12.71□□□□□ -0.38
MSH6-203ENST00000420813 IGHV3-66A0A0C4DH42 116 aa12.7□□□□□ -0.38
MSH6-203ENST00000420813 A0A0G2JRQ6 117 aa12.7□□□□□ -0.38
MSH6-203ENST00000420813 GABARAPH6UMI1 98 aa12.7□□□□□ -0.38
MSH6-203ENST00000420813 CDS2O95674 445 aa12.7□□□□□ -0.38
MSH6-203ENST00000420813 CRYBB3P26998 211 aa12.7□□□□□ -0.38
MSH6-203ENST00000420813 SPCS3P61009 180 aa12.7□□□□□ -0.38
MSH6-203ENST00000420813 MRPS10P82664 201 aaKnown RBP12.7□□□□□ -0.38
MSH6-203ENST00000420813 TMEM187Q14656 261 aa12.7□□□□□ -0.38
MSH6-203ENST00000420813 LEMD1Q68G75 181 aa12.7□□□□□ -0.38
MSH6-203ENST00000420813 LGALS9CQ6DKI2 356 aa12.7□□□□□ -0.38
MSH6-203ENST00000420813 OR52E5Q8NH55 327 aa12.7□□□□□ -0.38
MSH6-203ENST00000420813 C11orf45Q8TAV5 145 aa12.7□□□□□ -0.38
MSH6-203ENST00000420813 MARCH1Q8TCQ1 289 aa12.7□□□□□ -0.38
MSH6-203ENST00000420813 TMEM222Q9H0R3 208 aa12.7□□□□□ -0.38
MSH6-203ENST00000420813 TRAV30A0A087WSZ9 112 aa12.69□□□□□ -0.38
MSH6-203ENST00000420813 HTR2BP41595 481 aa12.69□□□□□ -0.38
MSH6-203ENST00000420813 MEF2DQ14814 521 aa12.69□□□□□ -0.38
MSH6-203ENST00000420813 Q6ZRM9 215 aa12.69□□□□□ -0.38
MSH6-203ENST00000420813 FAM24BQ8N5W8 94 aa12.69□□□□□ -0.38
MSH6-203ENST00000420813 GRAMD2BQ96HH9 432 aa12.69□□□□□ -0.38
MSH6-203ENST00000420813 NARS2Q96I59 477 aaKnown RBP12.69□□□□□ -0.38
MSH6-203ENST00000420813 CCDC59Q9P031 241 aaKnown RBP12.69□□□□□ -0.38
MSH6-203ENST00000420813 RABAC1Q9UI14 185 aa12.69□□□□□ -0.38
MSH6-203ENST00000420813 RPS10-NUDT3A0A1W2PQS6 291 aa12.68□□□□□ -0.38
MSH6-203ENST00000420813 K7EQG2 157 aa12.68□□□□□ -0.38
MSH6-203ENST00000420813 IGKV1-17P01599 117 aa12.68□□□□□ -0.38
MSH6-203ENST00000420813 OR5AC1P0C628 307 aa12.68□□□□□ -0.38
MSH6-203ENST00000420813 P2RY1P47900 373 aa12.68□□□□□ -0.38
MSH6-203ENST00000420813 RBMS2Q15434 407 aaKnown RBP12.68□□□□□ -0.38
MSH6-203ENST00000420813 SURF2Q15527 256 aaPredicted RBP12.68□□□□□ -0.38
MSH6-203ENST00000420813 MLANAQ16655 118 aa12.68□□□□□ -0.38
MSH6-203ENST00000420813 TMEM41BQ5BJD5 291 aa12.68□□□□□ -0.38
MSH6-203ENST00000420813 STHQ8IWL8 128 aa12.68□□□□□ -0.38
MSH6-203ENST00000420813 GLYATL2Q8WU03 294 aa12.68□□□□□ -0.38
MSH6-203ENST00000420813 TMEM230Q96A57 120 aa12.68□□□□□ -0.38
MSH6-203ENST00000420813 MIXL1Q9H2W2 232 aa12.68□□□□□ -0.38
MSH6-203ENST00000420813 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.68□□□□□ -0.38
MSH6-203ENST00000420813 C14orf166Q9Y224 244 aaKnown RBP12.68□□□□□ -0.38
MSH6-203ENST00000420813 FRAS1Q86XX4 4008 aa12.67□□□□□ -0.38
MSH6-203ENST00000420813 IFNA4P05014 189 aa12.67□□□□□ -0.38
MSH6-203ENST00000420813 NANOS2P60321 138 aaKnown RBP12.67□□□□□ -0.38
MSH6-203ENST00000420813 DHODHQ02127 395 aa12.67□□□□□ -0.38
MSH6-203ENST00000420813 STXBP6Q8NFX7 210 aa12.67□□□□□ -0.38
MSH6-203ENST00000420813 DYNC2LI1Q8TCX1 351 aa12.67□□□□□ -0.38
MSH6-203ENST00000420813 RBPMSQ93062 196 aaKnown RBP12.67□□□□□ -0.38
MSH6-203ENST00000420813 RTBDNQ9BSG5 229 aaPredicted RBP12.67□□□□□ -0.38
MSH6-203ENST00000420813 NAA60Q9H7X0 242 aa12.67□□□□□ -0.38
MSH6-203ENST00000420813 TEX13DA0A0J9YY54 714 aaPredicted RBP12.66□□□□□ -0.38
MSH6-203ENST00000420813 SPP1P10451 314 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms