RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 TM4SF20Q53R12 229 aa12.55□□□□□ -0.4
SEC22C-206ENST00000420163 C2orf83Q53S99 150 aa12.55□□□□□ -0.4
SEC22C-206ENST00000420163 SPSB3Q6PJ21 355 aa12.55□□□□□ -0.4
SEC22C-206ENST00000420163 COQ8AQ8NI60 647 aa12.55□□□□□ -0.4
SEC22C-206ENST00000420163 MITD1Q8WV92 249 aa12.55□□□□□ -0.4
SEC22C-206ENST00000420163 TMEM190Q8WZ59 177 aa12.55□□□□□ -0.4
SEC22C-206ENST00000420163 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
SEC22C-206ENST00000420163 CORTO00230 105 aa12.54□□□□□ -0.4
SEC22C-206ENST00000420163 IAPPP10997 89 aa12.54□□□□□ -0.4
SEC22C-206ENST00000420163 OPRK1P41145 380 aa12.54□□□□□ -0.4
SEC22C-206ENST00000420163 TXN2Q99757 166 aa12.54□□□□□ -0.4
SEC22C-206ENST00000420163 MAGT1Q9H0U3 335 aa12.54□□□□□ -0.4
SEC22C-206ENST00000420163 HIPK2Q9H2X6 1198 aa12.54□□□□□ -0.4
SEC22C-206ENST00000420163 CACFD1Q9UGQ2 172 aa12.54□□□□□ -0.4
SEC22C-206ENST00000420163 GNG7O60262 68 aa12.53□□□□□ -0.4
SEC22C-206ENST00000420163 CBLN1P23435 193 aa12.53□□□□□ -0.4
SEC22C-206ENST00000420163 GAR1Q9NY12 217 aaKnown RBP12.53□□□□□ -0.4
SEC22C-206ENST00000420163 FAM90A26D6RGX4 464 aa12.52□□□□□ -0.41
SEC22C-206ENST00000420163 NDUFA4O00483 81 aa12.52□□□□□ -0.41
SEC22C-206ENST00000420163 NUPL2O15504 423 aaKnown RBP12.52□□□□□ -0.41
SEC22C-206ENST00000420163 IFNA10P01566 189 aa12.52□□□□□ -0.41
SEC22C-206ENST00000420163 GP9P14770 177 aa12.52□□□□□ -0.41
SEC22C-206ENST00000420163 CD300EQ496F6 205 aaPredicted RBP12.52□□□□□ -0.41
SEC22C-206ENST00000420163 DEFB121Q5J5C9 76 aa12.52□□□□□ -0.41
SEC22C-206ENST00000420163 DUSP18Q8NEJ0 188 aa12.52□□□□□ -0.41
SEC22C-206ENST00000420163 ZNF431Q8TF32 576 aaPredicted RBP12.52□□□□□ -0.41
SEC22C-206ENST00000420163 OR10C1Q96KK4 312 aa12.52□□□□□ -0.41
SEC22C-206ENST00000420163 MLXQ9UH92 298 aa12.52□□□□□ -0.41
SEC22C-206ENST00000420163 LSM4Q9Y4Z0 139 aaKnown RBP12.52□□□□□ -0.41
SEC22C-206ENST00000420163 C15orf62A8K5M9 175 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 CCSO14618 274 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 ZNF207O43670 478 aaKnown RBP12.51□□□□□ -0.41
SEC22C-206ENST00000420163 TMEM50AO95807 157 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 NPBWR1P48145 328 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 DEFB114Q30KQ6 69 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 PRSS54Q6PEW0 395 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 NRARPQ7Z6K4 114 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 UXS1Q8NBZ7 420 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 OR4D5Q8NGN0 318 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 ENKURQ8TC29 256 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 RNASEH2CQ8TDP1 164 aaKnown RBP12.51□□□□□ -0.41
SEC22C-206ENST00000420163 DYNLRB2Q8TF09 96 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 C20orf24Q9BUV8 137 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 UFC1Q9Y3C8 167 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 U3KQ87 197 aa12.51□□□□□ -0.41
SEC22C-206ENST00000420163 SYNGR2O43760 224 aa12.5□□□□□ -0.41
SEC22C-206ENST00000420163 CLN5O75503 358 aa12.5□□□□□ -0.41
SEC22C-206ENST00000420163 IFNA21P01568 189 aa12.5□□□□□ -0.41
SEC22C-206ENST00000420163 C8orf88P0DMB2 117 aa12.5□□□□□ -0.41
SEC22C-206ENST00000420163 ELLP55199 621 aaPredicted RBP12.5□□□□□ -0.41
SEC22C-206ENST00000420163 BTNL8Q6UX41 500 aa12.5□□□□□ -0.41
SEC22C-206ENST00000420163 OR4X1Q8NH49 305 aa12.5□□□□□ -0.41
SEC22C-206ENST00000420163 PALMDQ9NP74 551 aa12.5□□□□□ -0.41
SEC22C-206ENST00000420163 RPS10-NUDT3A0A1W2PQS6 291 aa12.49□□□□□ -0.41
SEC22C-206ENST00000420163 WRBO00258 174 aa12.49□□□□□ -0.41
SEC22C-206ENST00000420163 RND2P52198 227 aa12.49□□□□□ -0.41
SEC22C-206ENST00000420163 POLR2GP62487 172 aaKnown RBP eCLIP12.49□□□□□ -0.41
SEC22C-206ENST00000420163 ID3Q02535 119 aa12.49□□□□□ -0.41
SEC22C-206ENST00000420163 RELQ04864 619 aaPredicted RBP12.49□□□□□ -0.41
SEC22C-206ENST00000420163 IAH1Q2TAA2 248 aaPredicted RBP12.49□□□□□ -0.41
SEC22C-206ENST00000420163 LCN12Q6JVE5 192 aa12.49□□□□□ -0.41
SEC22C-206ENST00000420163 TMEM61Q8N0U2 210 aa12.49□□□□□ -0.41
SEC22C-206ENST00000420163 ZBTB8BQ8NAP8 495 aaPredicted RBP12.49□□□□□ -0.41
SEC22C-206ENST00000420163 DAZ1Q9NQZ3 744 aaKnown RBP12.49□□□□□ -0.41
SEC22C-206ENST00000420163 TECRQ9NZ01 308 aaKnown RBP12.49□□□□□ -0.41
SEC22C-206ENST00000420163 COL7A1Q02388 2944 aa12.48□□□□□ -0.41
SEC22C-206ENST00000420163 ZNF785A8K8V0 405 aa12.48□□□□□ -0.41
SEC22C-206ENST00000420163 H3BP45 60 aa12.48□□□□□ -0.41
SEC22C-206ENST00000420163 MED6O75586 246 aa12.48□□□□□ -0.41
SEC22C-206ENST00000420163 YIF1AO95070 293 aa12.48□□□□□ -0.41
SEC22C-206ENST00000420163 IGKV1-17P01599 117 aa12.48□□□□□ -0.41
SEC22C-206ENST00000420163 CD69Q07108 199 aa12.48□□□□□ -0.41
SEC22C-206ENST00000420163 TIGITQ495A1 244 aa12.48□□□□□ -0.41
SEC22C-206ENST00000420163 TOMM20LQ6UXN7 152 aa12.48□□□□□ -0.41
SEC22C-206ENST00000420163 SLC16A13Q7RTY0 426 aa12.48□□□□□ -0.41
SEC22C-206ENST00000420163 Q8N1Y9 231 aa12.48□□□□□ -0.41
SEC22C-206ENST00000420163 C12orf45Q8N5I9 185 aaPredicted RBP12.48□□□□□ -0.41
SEC22C-206ENST00000420163 OR2K2Q8NGT1 345 aa12.48□□□□□ -0.41
SEC22C-206ENST00000420163 WDR89Q96FK6 387 aaPredicted RBP12.48□□□□□ -0.41
SEC22C-206ENST00000420163 ZFAND3Q9H8U3 227 aa12.48□□□□□ -0.41
SEC22C-206ENST00000420163 MRPL27Q9P0M9 148 aaKnown RBP12.48□□□□□ -0.41
SEC22C-206ENST00000420163 SCGB1D2O95969 90 aa12.47□□□□□ -0.41
SEC22C-206ENST00000420163 IFNA4P05014 189 aa12.47□□□□□ -0.41
SEC22C-206ENST00000420163 IL5P05113 134 aa12.47□□□□□ -0.41
SEC22C-206ENST00000420163 IGLC1P0CG04 106 aa12.47□□□□□ -0.41
SEC22C-206ENST00000420163 SLC25A4P12235 298 aa12.47□□□□□ -0.41
SEC22C-206ENST00000420163 NKX2-1P43699 371 aaPredicted RBP12.47□□□□□ -0.41
SEC22C-206ENST00000420163 ZNF600Q6ZNG1 722 aa12.47□□□□□ -0.41
SEC22C-206ENST00000420163 NOXA1Q86UR1 476 aa12.47□□□□□ -0.41
SEC22C-206ENST00000420163 TMEM116Q8NCL8 245 aa12.47□□□□□ -0.41
SEC22C-206ENST00000420163 MARC2Q969Z3 335 aa12.47□□□□□ -0.41
SEC22C-206ENST00000420163 ACY3Q96HD9 319 aa12.47□□□□□ -0.41
SEC22C-206ENST00000420163 CIB3Q96Q77 187 aaPredicted RBP12.47□□□□□ -0.41
SEC22C-206ENST00000420163 PUS1Q9Y606 427 aaKnown RBP eCLIP12.47□□□□□ -0.41
SEC22C-206ENST00000420163 IGHV3-49A0A0A0MS15 119 aa12.46□□□□□ -0.41
SEC22C-206ENST00000420163 K7EMT4 169 aa12.46□□□□□ -0.41
SEC22C-206ENST00000420163 SSSCA1O60232 199 aa12.46□□□□□ -0.41
SEC22C-206ENST00000420163 ATP5IP56385 69 aaPredicted RBP12.46□□□□□ -0.41
SEC22C-206ENST00000420163 DEFA1P59665 94 aa12.46□□□□□ -0.41
SEC22C-206ENST00000420163 DEFA3P59666 94 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms