RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 HLA-DRB3P79483 266 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 CCL7P80098 99 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 KIR2DS1Q14954 304 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 COX19Q49B96 90 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 OPN5Q6U736 354 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 TMEM205Q6UW68 189 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 Q6ZSR6 202 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 PNKDQ8N490 385 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 GPR32P1Q8NGA4 272 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 AQP3Q92482 292 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 IL22RA2Q969J5 263 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 SLAMF6Q96DU3 332 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 RSPO3Q9BXY4 272 aaPredicted RBP3.88□□□□□ -1.79
VPS13A-207ENST00000419472 PLA2G12AQ9BZM1 189 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 CLCF1Q9UBD9 225 aa3.88□□□□□ -1.79
VPS13A-207ENST00000419472 C4orf51C9J302 202 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 H0Y980 276 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 ORM1P02763 201 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 HSPB1P04792 205 aaKnown RBP3.87□□□□□ -1.79
VPS13A-207ENST00000419472 IGHV4-34P06331 123 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 PFN1P07737 140 aaKnown RBP3.87□□□□□ -1.79
VPS13A-207ENST00000419472 TCN2P20062 427 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 SSR2P43308 183 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 LPAL2Q16609 132 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 TMEM251Q8N6I4 163 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 OR8G5Q8NG78 346 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 OR10G4Q8NGN3 311 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 RNF138Q8WVD3 245 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 PTX4Q96A99 478 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 SLC35G5Q96KT7 338 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 OR51I1Q9H343 314 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 ZNF586Q9NXT0 402 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 ARID1BQ8NFD5 2236 aaPredicted RBP3.87□□□□□ -1.79
VPS13A-207ENST00000419472 BOD1L1Q8NFC6 3051 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 IGHV2-26A0A0B4J1V2 119 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 DAPL1A0PJW8 107 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 TAX1BP3O14907 124 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 GPR75O95800 540 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 SMIM17P0DL12 118 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 KLK2P20151 261 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 MDKP21741 143 aaPredicted RBP3.87□□□□□ -1.79
VPS13A-207ENST00000419472 CD38P28907 300 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 PEBP1P30086 187 aaKnown RBP3.87□□□□□ -1.79
VPS13A-207ENST00000419472 NTSP30990 170 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 GABRA2P47869 451 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 HINT1P49773 126 aaPredicted RBP3.87□□□□□ -1.79
VPS13A-207ENST00000419472 RPS11P62280 158 aaKnown RBP eCLIP3.87□□□□□ -1.79
VPS13A-207ENST00000419472 ARG2P78540 354 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 PRDX1Q06830 199 aaKnown RBP3.87□□□□□ -1.79
VPS13A-207ENST00000419472 PPP1R1AQ13522 171 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 DEFB110Q30KQ9 67 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 C11orf71Q6IPW1 123 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 NEGR1Q7Z3B1 354 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 CALHM1Q8IU99 346 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 ZDHHC22Q8N966 263 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 C5orf17Q8NAS9 161 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 AICDAQ9GZX7 198 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 KNTC1P50748 2209 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 CREBBPQ92793 2442 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 RP1P56715 2156 aa3.87□□□□□ -1.79
VPS13A-207ENST00000419472 FAM240AA0A1B0GVK7 77 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 HCRTR1O43613 425 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 TSPOP30536 169 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 HRH1P35367 487 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 BTN3A2P78410 334 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 DEFB134Q4QY38 66 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 C1orf174Q8IYL3 243 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 CHST4Q8NCG5 386 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 APCDD1LQ8NCL9 501 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 MORN4Q8NDC4 146 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 TMEM230Q96A57 120 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 MRAP2Q96G30 205 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 NUDT9Q9BW91 350 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 PARP12Q9H0J9 701 aaKnown RBP3.86□□□□□ -1.79
VPS13A-207ENST00000419472 CMC2Q9NRP2 79 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 POLQO75417 2590 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 NBEAQ8NFP9 2946 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 UBR5O95071 2799 aaPredicted RBP3.86□□□□□ -1.79
VPS13A-207ENST00000419472 AHCTF1Q8WYP5 2266 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 MAP1LC3B2A6NCE7 125 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 F5H768 121 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 IFNA5P01569 189 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 IGLC1P0CG04 106 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 PRSS3P35030 304 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 PPP1CCP36873 323 aaKnown RBP3.86□□□□□ -1.79
VPS13A-207ENST00000419472 RPL18AQ02543 176 aaKnown RBP3.86□□□□□ -1.79
VPS13A-207ENST00000419472 IL15RAQ13261 267 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 MPV17LQ2QL34 196 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 SPATA45Q537H7 98 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 AMMECR1LQ6DCA0 310 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 OR8I2Q8N0Y5 310 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 MUC15Q8N387 334 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 Q8N976 141 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 OR8S1Q8NH09 359 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 ZNF563Q8TA94 476 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 SIGLEC12Q96PQ1 595 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 HIST1H4GQ99525 98 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 P2RX4Q99571 388 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 PDCD1LG2Q9BQ51 273 aa3.86□□□□□ -1.79
VPS13A-207ENST00000419472 WFDC6Q9BQY6 131 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms