RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 NDUFA3O95167 84 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 COX7A1P24310 79 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 MEOX2P50222 304 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 S100A12P80511 92 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 C10orf55Q5SWW7 151 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 S100A7AQ86SG5 101 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 OR2T10Q8NGZ9 312 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 ITLN2Q8WWU7 325 aaPredicted RBP11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 SRSF12Q8WXF0 261 aaKnown RBP11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 PERPQ96FX8 193 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 HIVEP3Q5T1R4 2406 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 NAV3Q8IVL0 2385 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 SCO2A0A1W2PP80 73 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 ZNF98A6NK75 572 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 NBR2O15453 112 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 MOSP00540 346 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 HOXA5P20719 270 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 CDX1P47902 265 aaPredicted RBP11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 LY6DQ14210 128 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 SMIM12Q96EX1 92 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 TPSG1Q9NRR2 321 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 TBL2Q9Y4P3 447 aaKnown RBP11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 HIST1H2BKO60814 126 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 HIST1H2BJP06899 126 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 OR10J4P0C629 311 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 HIST1H2BOP23527 126 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 HIST1H2BBP33778 126 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 RPL35P42766 123 aaKnown RBP11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 HIST1H2BDP58876 126 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 HIST1H2BCP62807 126 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 UBE2L3P68036 154 aaKnown RBP11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 PLGLAQ15195 96 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 HIST2H2BEQ16778 126 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 SPATA31B1PQ5VZV4 182 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 TMEM37Q8WXS4 190 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 NPIPB3Q92617 1050 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 HIST1H2BHQ93079 126 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 HIST1H2BNQ99877 126 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 HIST1H2BMQ99879 126 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 TNFRSF19Q9NS68 423 aa11.65□□□□□ -0.54
HLA-DPA1-242ENST00000419277 IGHV3-72A0A0B4J1Y9 119 aa11.64□□□□□ -0.55
HLA-DPA1-242ENST00000419277 TEX22C9J3V5 150 aa11.64□□□□□ -0.55
HLA-DPA1-242ENST00000419277 TIMM23O14925 209 aa11.64□□□□□ -0.55
HLA-DPA1-242ENST00000419277 TRGC2P03986 189 aa11.64□□□□□ -0.55
HLA-DPA1-242ENST00000419277 TAS2R60P59551 318 aa11.64□□□□□ -0.55
HLA-DPA1-242ENST00000419277 MMDQ15546 238 aa11.64□□□□□ -0.55
HLA-DPA1-242ENST00000419277 TEX38Q6PEX7 206 aa11.64□□□□□ -0.55
HLA-DPA1-242ENST00000419277 OR2T6Q8NHC8 308 aa11.64□□□□□ -0.55
HLA-DPA1-242ENST00000419277 CFHR4Q92496 578 aa11.64□□□□□ -0.55
HLA-DPA1-242ENST00000419277 C12orf57Q99622 126 aa11.64□□□□□ -0.55
HLA-DPA1-242ENST00000419277 PITPNC1Q9UKF7 332 aa11.64□□□□□ -0.55
HLA-DPA1-242ENST00000419277 PIEZO1Q92508 2521 aa11.64□□□□□ -0.55
HLA-DPA1-242ENST00000419277 IGKV1D-37A0A075B6S9 117 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 GNG4P50150 75 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 OR5AU1Q8NGC0 362 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 OR4X1Q8NH49 305 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 FAM167A-AS1Q96KT0 104 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 RNF24Q9Y225 148 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 CACNA1AO00555 2505 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 ATRXP46100 2492 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 TRBV20OR9-2A0A075B6H5 130 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 HELTA6NFD8 242 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 SCGB2A1O75556 95 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 ARF6P62330 175 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 EBI3Q14213 229 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 TIGITQ495A1 244 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 COX19Q49B96 90 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 ZNF503Q96F45 646 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 MISP3Q96FF7 219 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 EAF1Q96JC9 268 aaPredicted RBP11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 ZNF48Q96MX3 618 aaPredicted RBP11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 PAXXQ9BUH6 204 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 DERL1Q9BUN8 251 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 SLC25A2Q9BXI2 301 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 CDC42EP3Q9UKI2 254 aa11.63□□□□□ -0.55
HLA-DPA1-242ENST00000419277 A0A1W2PPQ1 181 aa11.62□□□□□ -0.55
HLA-DPA1-242ENST00000419277 KALRNO60229 2985 aa11.62□□□□□ -0.55
HLA-DPA1-242ENST00000419277 S100A2P29034 98 aa11.62□□□□□ -0.55
HLA-DPA1-242ENST00000419277 OR10G8Q8NGN5 311 aa11.62□□□□□ -0.55
HLA-DPA1-242ENST00000419277 FAM122AQ96E09 287 aa11.62□□□□□ -0.55
HLA-DPA1-242ENST00000419277 RITA1Q96K30 269 aa11.62□□□□□ -0.55
HLA-DPA1-242ENST00000419277 OR51M1Q9H341 326 aa11.62□□□□□ -0.55
HLA-DPA1-242ENST00000419277 FBXL15Q9H469 300 aa11.62□□□□□ -0.55
HLA-DPA1-242ENST00000419277 ZNF355PQ9NSJ1 428 aa11.62□□□□□ -0.55
HLA-DPA1-242ENST00000419277 PHOX2AO14813 284 aa11.61□□□□□ -0.55
HLA-DPA1-242ENST00000419277 HYPMO75409 117 aa11.61□□□□□ -0.55
HLA-DPA1-242ENST00000419277 FOXH1O75593 365 aa11.61□□□□□ -0.55
HLA-DPA1-242ENST00000419277 LGALS4P56470 323 aa11.61□□□□□ -0.55
HLA-DPA1-242ENST00000419277 COA6Q5JTJ3 125 aaKnown RBP11.61□□□□□ -0.55
HLA-DPA1-242ENST00000419277 GAR1Q9NY12 217 aaKnown RBP11.61□□□□□ -0.55
HLA-DPA1-242ENST00000419277 C1RLQ9NZP8 487 aa11.61□□□□□ -0.55
HLA-DPA1-242ENST00000419277 NBASA2RRP1 2371 aa11.61□□□□□ -0.55
HLA-DPA1-242ENST00000419277 TRAV30A0A087WSZ9 112 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 NPIPB5A8MRT5 1133 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 CNIH1O95406 144 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 C5orf64Q2M2E5 130 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 ACTL10Q5JWF8 245 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 DNLZQ5SXM8 178 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 LINC00305Q7Z4B0 112 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms