RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 CASC10Q5T4H9 136 aa12.29□□□□□ -0.44
LINC00404-201ENST00000418660 TMEM116Q8NCL8 245 aa12.29□□□□□ -0.44
LINC00404-201ENST00000418660 RHPN1-AS1Q9BWJ2 59 aa12.29□□□□□ -0.44
LINC00404-201ENST00000418660 RETNQ9HD89 108 aa12.29□□□□□ -0.44
LINC00404-201ENST00000418660 HEYLQ9NQ87 328 aaPredicted RBP12.29□□□□□ -0.44
LINC00404-201ENST00000418660 CACFD1Q9UGQ2 172 aa12.29□□□□□ -0.44
LINC00404-201ENST00000418660 OR4C46A6NHA9 309 aa12.28□□□□□ -0.44
LINC00404-201ENST00000418660 OPRK1P41145 380 aa12.28□□□□□ -0.44
LINC00404-201ENST00000418660 HTR2BP41595 481 aa12.28□□□□□ -0.44
LINC00404-201ENST00000418660 SUPT4H1P63272 117 aaKnown RBP12.28□□□□□ -0.44
LINC00404-201ENST00000418660 ZNF79Q15937 498 aa12.28□□□□□ -0.44
LINC00404-201ENST00000418660 TOMM20LQ6UXN7 152 aa12.28□□□□□ -0.44
LINC00404-201ENST00000418660 CCDC190Q86UF4 302 aa12.28□□□□□ -0.44
LINC00404-201ENST00000418660 TOMM5Q8N4H5 51 aa12.28□□□□□ -0.44
LINC00404-201ENST00000418660 RNF2Q99496 336 aa12.28□□□□□ -0.44
LINC00404-201ENST00000418660 GINS3Q9BRX5 216 aa12.28□□□□□ -0.44
LINC00404-201ENST00000418660 GGTLC1Q9BX51 225 aa12.28□□□□□ -0.44
LINC00404-201ENST00000418660 FNDC4Q9H6D8 234 aaPredicted RBP12.28□□□□□ -0.44
LINC00404-201ENST00000418660 LOC102724200A0A096LPH7 203 aaPredicted RBP12.27□□□□□ -0.45
LINC00404-201ENST00000418660 SULT1A3P0DMM9 295 aa12.27□□□□□ -0.45
LINC00404-201ENST00000418660 SULT1A4P0DMN0 295 aa12.27□□□□□ -0.45
LINC00404-201ENST00000418660 ANXA3P12429 323 aa12.27□□□□□ -0.45
LINC00404-201ENST00000418660 ZNF600Q6ZNG1 722 aa12.27□□□□□ -0.45
LINC00404-201ENST00000418660 OR4X1Q8NH49 305 aa12.27□□□□□ -0.45
LINC00404-201ENST00000418660 DEDD2Q8WXF8 326 aa12.27□□□□□ -0.45
LINC00404-201ENST00000418660 PRR13Q9NZ81 148 aa12.27□□□□□ -0.45
LINC00404-201ENST00000418660 IGHV3-49A0A0A0MS15 119 aa12.26□□□□□ -0.45
LINC00404-201ENST00000418660 A0A0B4J2A0 478 aa12.26□□□□□ -0.45
LINC00404-201ENST00000418660 CEBPZOSA8MTT3 80 aa12.26□□□□□ -0.45
LINC00404-201ENST00000418660 CLN5O75503 358 aa12.26□□□□□ -0.45
LINC00404-201ENST00000418660 SRPXP78539 464 aa12.26□□□□□ -0.45
LINC00404-201ENST00000418660 MLANAQ16655 118 aa12.26□□□□□ -0.45
LINC00404-201ENST00000418660 C2orf83Q53S99 150 aa12.26□□□□□ -0.45
LINC00404-201ENST00000418660 NMSQ5H8A3 153 aa12.26□□□□□ -0.45
LINC00404-201ENST00000418660 LGI3Q8N145 548 aa12.26□□□□□ -0.45
LINC00404-201ENST00000418660 FAM110AQ9BQ89 295 aa12.26□□□□□ -0.45
LINC00404-201ENST00000418660 MRPL36Q9P0J6 103 aaKnown RBP12.26□□□□□ -0.45
LINC00404-201ENST00000418660 UBQLN2Q9UHD9 624 aa12.26□□□□□ -0.45
LINC00404-201ENST00000418660 SHPKQ9UHJ6 478 aa12.26□□□□□ -0.45
LINC00404-201ENST00000418660 PUS1Q9Y606 427 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC00404-201ENST00000418660 PIGBOS1A0A0B4J2F0 54 aa12.25□□□□□ -0.45
LINC00404-201ENST00000418660 RPS10-NUDT3A0A1W2PQS6 291 aa12.25□□□□□ -0.45
LINC00404-201ENST00000418660 SCGB2A1O75556 95 aa12.25□□□□□ -0.45
LINC00404-201ENST00000418660 CD5P06127 495 aa12.25□□□□□ -0.45
LINC00404-201ENST00000418660 BMI1P35226 326 aa12.25□□□□□ -0.45
LINC00404-201ENST00000418660 CCR6P51684 374 aa12.25□□□□□ -0.45
LINC00404-201ENST00000418660 ODF3L2Q3SX64 289 aa12.25□□□□□ -0.45
LINC00404-201ENST00000418660 FAM90A2PQ658T7 463 aa12.25□□□□□ -0.45
LINC00404-201ENST00000418660 LYZL2Q7Z4W2 148 aa12.25□□□□□ -0.45
LINC00404-201ENST00000418660 SLC24A4Q8NFF2 622 aa12.25□□□□□ -0.45
LINC00404-201ENST00000418660 RNASEH2CQ8TDP1 164 aaKnown RBP12.25□□□□□ -0.45
LINC00404-201ENST00000418660 ZFAND3Q9H8U3 227 aa12.25□□□□□ -0.45
LINC00404-201ENST00000418660 IGHV3OR16-13A0A075B7E8 117 aa12.24□□□□□ -0.45
LINC00404-201ENST00000418660 TRAV30A0A087WSZ9 112 aa12.24□□□□□ -0.45
LINC00404-201ENST00000418660 IGHV3-74A0A0B4J1X5 117 aa12.24□□□□□ -0.45
LINC00404-201ENST00000418660 A0A1B0GU03 582 aa12.24□□□□□ -0.45
LINC00404-201ENST00000418660 CMC4P56277 68 aaPredicted RBP12.24□□□□□ -0.45
LINC00404-201ENST00000418660 SMCO1Q147U7 214 aa12.24□□□□□ -0.45
LINC00404-201ENST00000418660 TMEM128Q5BJH2 165 aa12.24□□□□□ -0.45
LINC00404-201ENST00000418660 SPANXN2Q5MJ10 180 aa12.24□□□□□ -0.45
LINC00404-201ENST00000418660 TMED4Q7Z7H5 227 aa12.24□□□□□ -0.45
LINC00404-201ENST00000418660 NOXA1Q86UR1 476 aa12.24□□□□□ -0.45
LINC00404-201ENST00000418660 SLC25A21Q9BQT8 299 aaPredicted RBP12.24□□□□□ -0.45
LINC00404-201ENST00000418660 VSIRQ9H7M9 311 aa12.24□□□□□ -0.45
LINC00404-201ENST00000418660 HSPB7Q9UBY9 170 aa12.24□□□□□ -0.45
LINC00404-201ENST00000418660 KMT2CQ8NEZ4 4911 aaKnown RBP12.23□□□□□ -0.45
LINC00404-201ENST00000418660 NBEAL2Q6ZNJ1 2754 aa12.23□□□□□ -0.45
LINC00404-201ENST00000418660 NXPH3O95157 252 aa12.23□□□□□ -0.45
LINC00404-201ENST00000418660 APOHP02749 345 aaPredicted RBP12.23□□□□□ -0.45
LINC00404-201ENST00000418660 SLC25A4P12235 298 aa12.23□□□□□ -0.45
LINC00404-201ENST00000418660 TNFRSF9Q07011 255 aa12.23□□□□□ -0.45
LINC00404-201ENST00000418660 TCF24Q7RTU0 167 aa12.23□□□□□ -0.45
LINC00404-201ENST00000418660 TMEM170AQ8WVE7 144 aa12.23□□□□□ -0.45
LINC00404-201ENST00000418660 ST8SIA2Q92186 375 aa12.23□□□□□ -0.45
LINC00404-201ENST00000418660 DUXBA0A1W2PPF3 345 aa12.22□□□□□ -0.45
LINC00404-201ENST00000418660 IGKV1-17P01599 117 aa12.22□□□□□ -0.45
LINC00404-201ENST00000418660 NPPCP23582 126 aa12.22□□□□□ -0.45
LINC00404-201ENST00000418660 NPY1RP25929 384 aa12.22□□□□□ -0.45
LINC00404-201ENST00000418660 TFPI2P48307 235 aa12.22□□□□□ -0.45
LINC00404-201ENST00000418660 APOC4P55056 127 aa12.22□□□□□ -0.45
LINC00404-201ENST00000418660 PAFAH1B2P68402 229 aa12.22□□□□□ -0.45
LINC00404-201ENST00000418660 ZFAND6Q6FIF0 208 aa12.22□□□□□ -0.45
LINC00404-201ENST00000418660 ETFRF1Q6IPR1 90 aa12.22□□□□□ -0.45
LINC00404-201ENST00000418660 PRSS54Q6PEW0 395 aa12.22□□□□□ -0.45
LINC00404-201ENST00000418660 SRRQ9GZT4 340 aa12.22□□□□□ -0.45
LINC00404-201ENST00000418660 TMEM231Q9H6L2 316 aa12.22□□□□□ -0.45
LINC00404-201ENST00000418660 IGKV3-7A0A075B6H7 116 aa12.21□□□□□ -0.45
LINC00404-201ENST00000418660 UBE2CO00762 179 aa12.21□□□□□ -0.45
LINC00404-201ENST00000418660 RND2P52198 227 aa12.21□□□□□ -0.45
LINC00404-201ENST00000418660 TIGITQ495A1 244 aa12.21□□□□□ -0.45
LINC00404-201ENST00000418660 LILRB2Q8N423 598 aa12.21□□□□□ -0.45
LINC00404-201ENST00000418660 LRTM2Q8N967 370 aa12.21□□□□□ -0.45
LINC00404-201ENST00000418660 OR1S2Q8NGQ3 325 aa12.21□□□□□ -0.45
LINC00404-201ENST00000418660 DTD1Q8TEA8 209 aa12.21□□□□□ -0.45
LINC00404-201ENST00000418660 OVOL2Q9BRP0 275 aa12.21□□□□□ -0.45
LINC00404-201ENST00000418660 RBKSQ9H477 322 aa12.21□□□□□ -0.45
LINC00404-201ENST00000418660 U3KQ87 197 aa12.21□□□□□ -0.45
LINC00404-201ENST00000418660 IGHV3-66A0A0C4DH42 116 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 KIR2DL5BA0A0G2JN68 375 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 KIR2DL5BA0A0G2JPC4 375 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms