RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 ZNF414Q96IQ9 312 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 ZNF436Q9C0F3 470 aaPredicted RBP7.99□□□□□ -1.13
RFC1-203ENST00000418436 C20orf85Q9H1P6 137 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 HEYLQ9NQ87 328 aaPredicted RBP7.99□□□□□ -1.13
RFC1-203ENST00000418436 ZNF256Q9Y2P7 627 aaPredicted RBP7.99□□□□□ -1.13
RFC1-203ENST00000418436 OR2T8A6NH00 312 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 CEBPZOSA8MTT3 80 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 A8MWP6 167 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 CTSGP08311 255 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 HOXB5P09067 269 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 MFAP4P55083 255 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 FAM106AQ4KMX7 169 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 C4orf46Q504U0 113 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 GGNBP1Q5YKI7 109 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 MZT2BQ6NZ67 158 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 OR1S1Q8NH92 325 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 COQ8AQ8NI60 647 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 MRAPQ8TCY5 172 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 TMEM170AQ8WVE7 144 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 CHRDL1Q9BU40 450 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 RBKSQ9H477 322 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 ZC4H2Q9NQZ6 224 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 GAR1Q9NY12 217 aaKnown RBP7.98□□□□□ -1.13
RFC1-203ENST00000418436 SORL1Q92673 2214 aa7.98□□□□□ -1.13
RFC1-203ENST00000418436 FAM240BA0A1B0GVZ2 78 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 TMEM213A2RRL7 107 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 C2orf70A6NJV1 201 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 FAM90A26D6RGX4 464 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 NXPH3O95157 252 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 IGHV3-48P01763 117 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 SPNP16150 400 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 ELLP55199 621 aaPredicted RBP7.97□□□□□ -1.13
RFC1-203ENST00000418436 Q56UQ5 140 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 C11orf87Q6NUJ2 197 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 UNQ9165/PRO28630Q6UXU0 137 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 SLC24A4Q8NFF2 622 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 DTD1Q8TEA8 209 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 MITD1Q8WV92 249 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 PINX1Q96BK5 328 aaKnown RBP7.97□□□□□ -1.13
RFC1-203ENST00000418436 HIPK2Q9H2X6 1198 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 FNDC4Q9H6D8 234 aaPredicted RBP7.97□□□□□ -1.13
RFC1-203ENST00000418436 NUDT15Q9NV35 164 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 U3KQ87 197 aa7.97□□□□□ -1.13
RFC1-203ENST00000418436 TRAV6A0A075B6T7 132 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 ZNF320A2RRD8 509 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 NDUFA4O00483 81 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 ADAP1O75689 374 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 C8orf88P0DMB2 117 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 FOLR2P14207 255 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 EDN2P20800 178 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 CBLN1P23435 193 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 ATP5IP56385 69 aaPredicted RBP7.96□□□□□ -1.14
RFC1-203ENST00000418436 MLANAQ16655 118 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 NOXA1Q86UR1 476 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 HAPLN4Q86UW8 402 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 UBAC2Q8NBM4 344 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 DUSP18Q8NEJ0 188 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 OR52B4Q8NGK2 314 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 OR2K2Q8NGT1 345 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 RNASEH2CQ8TDP1 164 aaKnown RBP7.96□□□□□ -1.14
RFC1-203ENST00000418436 TMEM190Q8WZ59 177 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 PRR25Q96S07 402 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 PALMDQ9NP74 551 aa7.96□□□□□ -1.14
RFC1-203ENST00000418436 MRPL36Q9P0J6 103 aaKnown RBP7.96□□□□□ -1.14
RFC1-203ENST00000418436 LSM4Q9Y4Z0 139 aaKnown RBP7.96□□□□□ -1.14
RFC1-203ENST00000418436 IGHV3-35A0A0C4DH35 117 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 MPTX1A8MV57 137 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 K7EMT4 169 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 NUPL2O15504 423 aaKnown RBP7.95□□□□□ -1.14
RFC1-203ENST00000418436 GNG7O60262 68 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 TMEM50AO95807 157 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 GP9P14770 177 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 NPY1RP25929 384 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 OPRK1P41145 380 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 NPBWR1P48145 328 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 DEFB114Q30KQ6 69 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 TM4SF20Q53R12 229 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 OR4X1Q8NH49 305 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 ZNF431Q8TF32 576 aaPredicted RBP7.95□□□□□ -1.14
RFC1-203ENST00000418436 MARC2Q969Z3 335 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 TECRQ9NZ01 308 aaKnown RBP7.95□□□□□ -1.14
RFC1-203ENST00000418436 UFC1Q9Y3C8 167 aa7.95□□□□□ -1.14
RFC1-203ENST00000418436 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.95□□□□□ -1.14
RFC1-203ENST00000418436 RPS10-NUDT3A0A1W2PQS6 291 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 IZUMO1RA6ND01 250 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 SYNGR2O43760 224 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 CLN5O75503 358 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 MED6O75586 246 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 IFNA10P01566 189 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 IFNA21P01568 189 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 IL5P05113 134 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 RELQ04864 619 aaPredicted RBP7.94□□□□□ -1.14
RFC1-203ENST00000418436 DCTN2Q13561 401 aaKnown RBP7.94□□□□□ -1.14
RFC1-203ENST00000418436 PRSS54Q6PEW0 395 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 UXS1Q8NBZ7 420 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 OR4D5Q8NGN0 318 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 CACNG8Q8WXS5 425 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 OR10C1Q96KK4 312 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 SEC22CQ9BRL7 303 aa7.94□□□□□ -1.14
RFC1-203ENST00000418436 MRPL27Q9P0M9 148 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms