RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PMCHL2Q9BQD1 86 aa9.4□□□□□ -0.9
PTCH1-205ENST00000418258 C3orf56Q8N813 242 aa9.4□□□□□ -0.9
PTCH1-205ENST00000418258 GGACTQ9BVM4 153 aa9.4□□□□□ -0.9
PTCH1-205ENST00000418258 DANCRP0C864 163 aa9.4□□□□□ -0.9
PTCH1-205ENST00000418258 GNLYP22749 145 aa9.4□□□□□ -0.9
PTCH1-205ENST00000418258 VCX2Q9H322 139 aa9.4□□□□□ -0.9
PTCH1-205ENST00000418258 APOHP02749 345 aaPredicted RBP9.4□□□□□ -0.9
PTCH1-205ENST00000418258 FHITP49789 147 aa9.4□□□□□ -0.9
PTCH1-205ENST00000418258 ZP1P60852 638 aa9.4□□□□□ -0.9
PTCH1-205ENST00000418258 C2orf68Q2NKX9 166 aa9.4□□□□□ -0.9
PTCH1-205ENST00000418258 FAM209BQ5JX69 171 aa9.4□□□□□ -0.9
PTCH1-205ENST00000418258 ZNF324BQ6AW86 544 aaPredicted RBP9.4□□□□□ -0.9
PTCH1-205ENST00000418258 FAM166AQ6J272 317 aa9.4□□□□□ -0.9
PTCH1-205ENST00000418258 KIR3DL3Q8N743 410 aa9.4□□□□□ -0.9
PTCH1-205ENST00000418258 TMEM14DPA8MWL7 114 aa9.4□□□□□ -0.91
PTCH1-205ENST00000418258 LINC01590Q5TEZ4 76 aa9.4□□□□□ -0.91
PTCH1-205ENST00000418258 TMEM219Q86XT9 240 aa9.4□□□□□ -0.91
PTCH1-205ENST00000418258 ZNF837Q96EG3 531 aaPredicted RBP9.4□□□□□ -0.91
PTCH1-205ENST00000418258 SELENOKQ9Y6D0 94 aa9.4□□□□□ -0.91
PTCH1-205ENST00000418258 SCO2A0A1W2PP80 73 aa9.4□□□□□ -0.91
PTCH1-205ENST00000418258 DUSP14O95147 198 aaKnown RBP9.4□□□□□ -0.91
PTCH1-205ENST00000418258 WFIKKN1Q96NZ8 548 aa9.4□□□□□ -0.91
PTCH1-205ENST00000418258 PHLDA1Q8WV24 401 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-205ENST00000418258 ANAPC1Q9H1A4 1944 aa9.39□□□□□ -0.91
PTCH1-205ENST00000418258 FRMPD3Q5JV73 1810 aa9.39□□□□□ -0.91
PTCH1-205ENST00000418258 PIN1P1O15428 100 aa9.39□□□□□ -0.91
PTCH1-205ENST00000418258 IFI27P40305 119 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-205ENST00000418258 PAX8Q06710 450 aa9.39□□□□□ -0.91
PTCH1-205ENST00000418258 ZNF660Q6AZW8 331 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-205ENST00000418258 CACNG8Q8WXS5 425 aa9.39□□□□□ -0.91
PTCH1-205ENST00000418258 IGKV1D-43A0A0B4J1Z2 117 aa9.39□□□□□ -0.91
PTCH1-205ENST00000418258 IGLV3-19P01714 112 aa9.39□□□□□ -0.91
PTCH1-205ENST00000418258 FAM89BQ8N5H3 189 aa9.39□□□□□ -0.91
PTCH1-205ENST00000418258 KIF26AQ9ULI4 1882 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-205ENST00000418258 UNQ6494/PRO21346Q6UXR6 183 aa9.39□□□□□ -0.91
PTCH1-205ENST00000418258 SIPA1L1O43166 1804 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 RPL35AP18077 110 aaKnown RBP9.38□□□□□ -0.91
PTCH1-205ENST00000418258 GATA2P23769 480 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-205ENST00000418258 C10orf126Q8N4M7 172 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 ST20Q9HBF5 79 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 LINC00527Q9UJ94 153 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 GCM2O75603 506 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-205ENST00000418258 TCF23Q7RTU1 214 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 VMO1Q7Z5L0 202 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 TM2D1Q9BX74 207 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 A0A0G2JMZ2 1700 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 LRRC37A2A6NM11 1700 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 PQLC2LA1A4F0 135 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-205ENST00000418258 RPP21Q9H633 154 aaKnown RBP9.38□□□□□ -0.91
PTCH1-205ENST00000418258 NPDC1Q9NQX5 325 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-205ENST00000418258 DENND4AQ7Z401 1863 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 ADARB2-AS1A8MUL3 147 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 H2BFSP57053 126 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 PSMG3Q9BT73 122 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-205ENST00000418258 IGHV1-18A0A0C4DH31 117 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 APOMO95445 188 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 SIGLEC15Q6ZMC9 328 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 ORMDL3Q8N138 153 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 CXorf65A6NEN9 183 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 SLC17A3O00476 420 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 TMEM50AO95807 157 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 ERVK11-1P61568 191 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 CHCHD5Q9BSY4 110 aa9.38□□□□□ -0.91
PTCH1-205ENST00000418258 PSMG4Q5JS54 123 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 ASCL4Q6XD76 172 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 PLCE1Q9P212 2302 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 CDK2AP2O75956 126 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 ASCL2Q99929 193 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 HIGD1CA8MV81 97 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 LDLRAD4O15165 306 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 YPEL1O60688 119 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 GHRHP01286 108 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 CIARTQ8N365 385 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-205ENST00000418258 YPEL2Q96QA6 119 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 PRADC1Q9BSG0 188 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 FABP5P3A8MUU1 101 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 CKS1BP61024 79 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 CFHR1Q03591 330 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 MIR17HGQ75NE6 70 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 MORN2Q502X0 79 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 TRAV21A0A0B4J279 112 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 TIMM23O14925 209 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 RAMP3O60896 148 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 TFF1P04155 84 aa9.37□□□□□ -0.91
PTCH1-205ENST00000418258 DPRXA6NFQ7 191 aa9.36□□□□□ -0.91
PTCH1-205ENST00000418258 MRPL14Q6P1L8 145 aaKnown RBP9.36□□□□□ -0.91
PTCH1-205ENST00000418258 FOXF2Q12947 444 aa9.36□□□□□ -0.91
PTCH1-205ENST00000418258 RNF125Q96EQ8 232 aa9.36□□□□□ -0.91
PTCH1-205ENST00000418258 SDHCQ99643 169 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-205ENST00000418258 FBLN7Q53RD9 439 aa9.36□□□□□ -0.91
PTCH1-205ENST00000418258 RCC1LQ96I51 464 aaKnown RBP9.36□□□□□ -0.91
PTCH1-205ENST00000418258 SLC50A1Q9BRV3 221 aa9.36□□□□□ -0.91
PTCH1-205ENST00000418258 NEUROG1Q92886 237 aa9.36□□□□□ -0.91
PTCH1-205ENST00000418258 TDGF1P3P51864 188 aa9.36□□□□□ -0.91
PTCH1-205ENST00000418258 GFI1BQ5VTD9 330 aa9.36□□□□□ -0.91
PTCH1-205ENST00000418258 C20orf204Q6ZNR8 217 aa9.36□□□□□ -0.91
PTCH1-205ENST00000418258 SEPSECSQ9HD40 501 aaKnown RBP9.36□□□□□ -0.91
PTCH1-205ENST00000418258 ZSWIM8A7E2V4 1837 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms