RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 CITED4Q96RK1 184 aa11.49□□□□□ -0.57
NUP50-204ENST00000417702 SPAG8Q99932 426 aaPredicted RBP11.49□□□□□ -0.57
NUP50-204ENST00000417702 WDR12Q9GZL7 423 aaKnown RBP11.49□□□□□ -0.57
NUP50-204ENST00000417702 WFDC10AQ9H1F0 79 aa11.49□□□□□ -0.57
NUP50-204ENST00000417702 CACNG5Q9UF02 275 aa11.49□□□□□ -0.57
NUP50-204ENST00000417702 RNASE2P10153 161 aaKnown RBP11.48□□□□□ -0.57
NUP50-204ENST00000417702 CCR6P51684 374 aa11.48□□□□□ -0.57
NUP50-204ENST00000417702 ZNF846Q147U1 533 aa11.48□□□□□ -0.57
NUP50-204ENST00000417702 AARDQ4LEZ3 155 aa11.48□□□□□ -0.57
NUP50-204ENST00000417702 TMEM128Q5BJH2 165 aa11.48□□□□□ -0.57
NUP50-204ENST00000417702 LINC00322Q6ZN03 302 aaPredicted RBP11.48□□□□□ -0.57
NUP50-204ENST00000417702 IL22RA2Q969J5 263 aa11.48□□□□□ -0.57
NUP50-204ENST00000417702 GPR146Q96CH1 333 aa11.48□□□□□ -0.57
NUP50-204ENST00000417702 CACFD1Q9UGQ2 172 aa11.48□□□□□ -0.57
NUP50-204ENST00000417702 TMEM56-RWDD3S4R434 201 aa11.48□□□□□ -0.57
NUP50-204ENST00000417702 PIGBOS1A0A0B4J2F0 54 aa11.47□□□□□ -0.57
NUP50-204ENST00000417702 RBMY1BA6NDE4 496 aaKnown RBP11.47□□□□□ -0.57
NUP50-204ENST00000417702 RBMY1EA6NEQ0 496 aaKnown RBP11.47□□□□□ -0.57
NUP50-204ENST00000417702 TSPAN4O14817 238 aa11.47□□□□□ -0.57
NUP50-204ENST00000417702 NDUFB6O95139 128 aa11.47□□□□□ -0.57
NUP50-204ENST00000417702 RBMY1DP0C7P1 496 aaKnown RBP11.47□□□□□ -0.57
NUP50-204ENST00000417702 OPRK1P41145 380 aa11.47□□□□□ -0.57
NUP50-204ENST00000417702 TMEM187Q14656 261 aa11.47□□□□□ -0.57
NUP50-204ENST00000417702 PVRIGQ6DKI7 326 aa11.47□□□□□ -0.57
NUP50-204ENST00000417702 CENPSQ8N2Z9 138 aa11.47□□□□□ -0.57
NUP50-204ENST00000417702 GINS3Q9BRX5 216 aa11.47□□□□□ -0.57
NUP50-204ENST00000417702 HEYLQ9NQ87 328 aaPredicted RBP11.47□□□□□ -0.57
NUP50-204ENST00000417702 SMPXQ9UHP9 88 aa11.47□□□□□ -0.57
NUP50-204ENST00000417702 HUWE1Q7Z6Z7 4374 aaKnown RBP11.46□□□□□ -0.57
NUP50-204ENST00000417702 TRAV14DV4A0A0A6YYC5 116 aa11.46□□□□□ -0.57
NUP50-204ENST00000417702 IGHV7-4-1A0A0J9YVY3 117 aa11.46□□□□□ -0.57
NUP50-204ENST00000417702 CEBPZOSA8MTT3 80 aa11.46□□□□□ -0.57
NUP50-204ENST00000417702 LYRM1O43325 122 aa11.46□□□□□ -0.57
NUP50-204ENST00000417702 SCGB2A1O75556 95 aa11.46□□□□□ -0.57
NUP50-204ENST00000417702 SULT1A3P0DMM9 295 aa11.46□□□□□ -0.57
NUP50-204ENST00000417702 SULT1A4P0DMN0 295 aa11.46□□□□□ -0.57
NUP50-204ENST00000417702 BMI1P35226 326 aa11.46□□□□□ -0.57
NUP50-204ENST00000417702 HTR2BP41595 481 aa11.46□□□□□ -0.57
NUP50-204ENST00000417702 SUPT4H1P63272 117 aaKnown RBP11.46□□□□□ -0.57
NUP50-204ENST00000417702 SRPXP78539 464 aa11.46□□□□□ -0.57
NUP50-204ENST00000417702 TMEM116Q8NCL8 245 aa11.46□□□□□ -0.57
NUP50-204ENST00000417702 OR10C1Q96KK4 312 aa11.46□□□□□ -0.57
NUP50-204ENST00000417702 RHPN1-AS1Q9BWJ2 59 aa11.46□□□□□ -0.57
NUP50-204ENST00000417702 RPS10-NUDT3A0A1W2PQS6 291 aa11.45□□□□□ -0.58
NUP50-204ENST00000417702 OR4C46A6NHA9 309 aa11.45□□□□□ -0.58
NUP50-204ENST00000417702 PLA2G10O15496 165 aa11.45□□□□□ -0.58
NUP50-204ENST00000417702 TMEM50AO95807 157 aa11.45□□□□□ -0.58
NUP50-204ENST00000417702 BTCP35070 178 aa11.45□□□□□ -0.58
NUP50-204ENST00000417702 UBE2MP61081 183 aaKnown RBP11.45□□□□□ -0.58
NUP50-204ENST00000417702 BSXQ3C1V8 233 aa11.45□□□□□ -0.58
NUP50-204ENST00000417702 ZNF600Q6ZNG1 722 aa11.45□□□□□ -0.58
NUP50-204ENST00000417702 LGI3Q8N145 548 aa11.45□□□□□ -0.58
NUP50-204ENST00000417702 HIPK2Q9H2X6 1198 aa11.45□□□□□ -0.58
NUP50-204ENST00000417702 PRR13Q9NZ81 148 aa11.45□□□□□ -0.58
NUP50-204ENST00000417702 LOC102724200A0A096LPH7 203 aaPredicted RBP11.44□□□□□ -0.58
NUP50-204ENST00000417702 A0A0B4J2A0 478 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 CHEK1O14757 476 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 CLN5O75503 358 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 LYL1P12980 280 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 VAMP1P23763 118 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 TOMM20LQ6UXN7 152 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 NOXA1Q86UR1 476 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 SLC24A4Q8NFF2 622 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 OR4X1Q8NH49 305 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 ZNF414Q96IQ9 312 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 RNF2Q99496 336 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 GGTLC1Q9BX51 225 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 FNDC4Q9H6D8 234 aaPredicted RBP11.44□□□□□ -0.58
NUP50-204ENST00000417702 RETNQ9HD89 108 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 SHPKQ9UHJ6 478 aa11.44□□□□□ -0.58
NUP50-204ENST00000417702 IGHV3-49A0A0A0MS15 119 aa11.43□□□□□ -0.58
NUP50-204ENST00000417702 SFT2D2O95562 160 aa11.43□□□□□ -0.58
NUP50-204ENST00000417702 PPP1R1AQ13522 171 aa11.43□□□□□ -0.58
NUP50-204ENST00000417702 SMCO1Q147U7 214 aa11.43□□□□□ -0.58
NUP50-204ENST00000417702 C2orf83Q53S99 150 aa11.43□□□□□ -0.58
NUP50-204ENST00000417702 MZT2BQ6NZ67 158 aa11.43□□□□□ -0.58
NUP50-204ENST00000417702 EDA2RQ9HAV5 297 aa11.43□□□□□ -0.58
NUP50-204ENST00000417702 UBQLN2Q9UHD9 624 aa11.43□□□□□ -0.58
NUP50-204ENST00000417702 PUS1Q9Y606 427 aaKnown RBP eCLIP11.43□□□□□ -0.58
NUP50-204ENST00000417702 IGHV3OR16-13A0A075B7E8 117 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 TRAV30A0A087WSZ9 112 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 IGHV3-74A0A0B4J1X5 117 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 DUXBA0A1W2PPF3 345 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 UPK1BO75841 260 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 NXPH3O95157 252 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 CD5P06127 495 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 MLANAQ16655 118 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 NMSQ5H8A3 153 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 CASC10Q5T4H9 136 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 ETFRF1Q6IPR1 90 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 LYZL2Q7Z4W2 148 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 RNASEH2CQ8TDP1 164 aaKnown RBP11.42□□□□□ -0.58
NUP50-204ENST00000417702 FAM110AQ9BQ89 295 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 FLVCR2Q9UPI3 526 aa11.42□□□□□ -0.58
NUP50-204ENST00000417702 SLC25A4P12235 298 aa11.41□□□□□ -0.58
NUP50-204ENST00000417702 NPY1RP25929 384 aa11.41□□□□□ -0.58
NUP50-204ENST00000417702 CMC4P56277 68 aaPredicted RBP11.41□□□□□ -0.58
NUP50-204ENST00000417702 PAFAH1B2P68402 229 aa11.41□□□□□ -0.58
NUP50-204ENST00000417702 TNFRSF9Q07011 255 aa11.41□□□□□ -0.58
NUP50-204ENST00000417702 ASAH1Q13510 395 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms