RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ZNF581Q9P0T4 197 aa4.43□□□□□ -1.7
ECHDC1-206ENST00000417628 ONECUT1Q9UBC0 465 aa4.43□□□□□ -1.7
ECHDC1-206ENST00000417628 GPR132Q9UNW8 380 aa4.43□□□□□ -1.7
ECHDC1-206ENST00000417628 CYSLTR1Q9Y271 337 aa4.43□□□□□ -1.7
ECHDC1-206ENST00000417628 MRPS33Q9Y291 106 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-206ENST00000417628 WSB1Q9Y6I7 421 aa4.43□□□□□ -1.7
ECHDC1-206ENST00000417628 DNAH3Q8TD57 4116 aa4.43□□□□□ -1.7
ECHDC1-206ENST00000417628 A0A087WX48 190 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 C13orf42A0A1B0GVH6 325 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 MDFIC2A0A1B0GVS7 189 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 A0A1B0GX51 115 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 MEIS3P1A6NDR6 274 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 SMIM9A6NGZ8 99 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 TMEM212A6NML5 194 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 LYNX1G3V0Z9 82 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 M0QXV9 152 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 M0R129 80 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 M0R1B8 84 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 WNT9BO14905 357 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 DEGS1O15121 323 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 MLNRO43193 412 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 UPK3AO75631 287 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 LYZL6O75951 148 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 SLC2A10O95528 541 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 ETHE1O95571 254 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 SERPINE2P07093 398 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 LYNX1P0DP58 116 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 FRKP42685 505 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 FOXG1P55316 489 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 EWSR1Q01844 656 aaKnown RBP eCLIP4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 KLRD1Q13241 179 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 ADIRFQ15847 76 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 KLF17Q5JT82 389 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 BVES-AS1Q5T3Y7 98 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 WDR25Q64LD2 544 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 RPL7L1Q6DKI1 246 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 SLC18B1Q6NT16 456 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 Q6Q795 121 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 TMEM64Q6YI46 380 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 C9orf139Q6ZV77 190 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 ZNF595Q8IYB9 648 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 ZNF709Q8N972 641 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 ZNF439Q8NDP4 499 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 BLNKQ8WV28 456 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 PP6455Q8WZ26 134 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 APOBEC3DQ96AK3 386 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 RNF183Q96D59 192 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 C2orf50Q96LR7 162 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 RCHY1Q96PM5 261 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 SPANXDQ9BXN6 97 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 GTSF1LQ9H1H1 148 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 GPR84Q9NQS5 396 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 IL36GQ9NZH8 169 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 KLK11Q9UBX7 282 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 OR5V1Q9UGF6 321 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 NUP214P35658 2090 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 CSMD3Q7Z407 3707 aa4.42□□□□□ -1.7
ECHDC1-206ENST00000417628 TRAV9-2A0A087WT02 112 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 KIR2DS1A0A191URI9 304 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 C1orf226A1L170 272 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 MSGN1A6NI15 193 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 ZNF878C9JN71 531 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 H3BRM9 83 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 NKX2-2O95096 273 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 UTS2O95399 124 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 IGKV3-11P04433 115 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 EVI2AP22794 236 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 HTR1DP28221 377 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 SRIP30626 198 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 ZNF93P35789 620 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 HINT1P49773 126 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 RPL38P63173 70 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 KIR2DS1Q14954 304 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 ATXN7L3Q14CW9 347 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 EXOSC7Q15024 291 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 CST9LP1Q5W188 147 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 AMMECR1LQ6DCA0 310 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 ZNF440Q8IYI8 595 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 SAXO1Q8IYX7 474 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 C10orf111Q8N326 155 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 OR10P1Q8NGE3 313 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 PLPPR1Q8TBJ4 325 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 NT5CQ8TCD5 201 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 SMIM19Q96E16 107 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 ADTRPQ96IZ2 230 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 SCGB3A2Q96PL1 93 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 SRSF8Q9BRL6 282 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 NDFIP1Q9BT67 221 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 NXF5Q9H1B4 397 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 LPAR5Q9H1C0 372 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 KLRF1Q9NZS2 232 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 PXMP4Q9Y6I8 212 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 PRR14LQ5THK1 2151 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 SCN3AQ9NY46 2000 aa4.41□□□□□ -1.7
ECHDC1-206ENST00000417628 DNAH9Q9NYC9 4486 aa4.4□□□□□ -1.7
ECHDC1-206ENST00000417628 ODAMA1E959 279 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 OR2T8A6NH00 312 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 GLOD5A6NK44 160 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF727A8MUV8 499 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms