RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 PALMDQ9NP74 551 aa17.63■□□□□ 0.41
SMARCB1-205ENST00000417137 SIGLEC8Q9NYZ4 499 aa17.63■□□□□ 0.41
SMARCB1-205ENST00000417137 TGP01266 2768 aa17.62■□□□□ 0.41
SMARCB1-205ENST00000417137 F8W735 103 aaPredicted RBP17.62■□□□□ 0.41
SMARCB1-205ENST00000417137 WRBO00258 174 aa17.62■□□□□ 0.41
SMARCB1-205ENST00000417137 IGHV3-48P01763 117 aa17.62■□□□□ 0.41
SMARCB1-205ENST00000417137 RELQ04864 619 aaPredicted RBP17.62■□□□□ 0.41
SMARCB1-205ENST00000417137 OR4D5Q8NGN0 318 aa17.62■□□□□ 0.41
SMARCB1-205ENST00000417137 MAGT1Q9H0U3 335 aa17.62■□□□□ 0.41
SMARCB1-205ENST00000417137 GSKIPQ9P0R6 139 aa17.62■□□□□ 0.41
SMARCB1-205ENST00000417137 IFNA4P05014 189 aa17.61■□□□□ 0.41
SMARCB1-205ENST00000417137 CTSGP08311 255 aa17.61■□□□□ 0.41
SMARCB1-205ENST00000417137 IAPPP10997 89 aa17.61■□□□□ 0.41
SMARCB1-205ENST00000417137 SLC25A4P12235 298 aa17.61■□□□□ 0.41
SMARCB1-205ENST00000417137 RAB11AP62491 216 aa17.61■□□□□ 0.41
SMARCB1-205ENST00000417137 IL34Q6ZMJ4 242 aa17.61■□□□□ 0.41
SMARCB1-205ENST00000417137 OR10C1Q96KK4 312 aa17.61■□□□□ 0.41
SMARCB1-205ENST00000417137 CHRDL1Q9BU40 450 aa17.61■□□□□ 0.41
SMARCB1-205ENST00000417137 ZNF436Q9C0F3 470 aaPredicted RBP17.61■□□□□ 0.41
SMARCB1-205ENST00000417137 SNRPGP15A8MWD9 76 aa17.6■□□□□ 0.41
SMARCB1-205ENST00000417137 FAM25EA8MYX2 175 aa17.6■□□□□ 0.41
SMARCB1-205ENST00000417137 NDUFA4O00483 81 aa17.6■□□□□ 0.41
SMARCB1-205ENST00000417137 CSN3P07498 182 aa17.6■□□□□ 0.41
SMARCB1-205ENST00000417137 KRTAP10-11P60412 298 aa17.6■□□□□ 0.41
SMARCB1-205ENST00000417137 ZBTB8BQ8NAP8 495 aaPredicted RBP17.6■□□□□ 0.41
SMARCB1-205ENST00000417137 OR4X1Q8NH49 305 aa17.6■□□□□ 0.41
SMARCB1-205ENST00000417137 FNDC4Q9H6D8 234 aaPredicted RBP17.6■□□□□ 0.41
SMARCB1-205ENST00000417137 UFC1Q9Y3C8 167 aa17.6■□□□□ 0.41
SMARCB1-205ENST00000417137 IGHV3-35A0A0C4DH35 117 aa17.59■□□□□ 0.41
SMARCB1-205ENST00000417137 C5orf51A6NDU8 294 aa17.59■□□□□ 0.41
SMARCB1-205ENST00000417137 ADMP35318 185 aa17.59■□□□□ 0.41
SMARCB1-205ENST00000417137 MLANAQ16655 118 aa17.59■□□□□ 0.41
SMARCB1-205ENST00000417137 C11orf87Q6NUJ2 197 aa17.59■□□□□ 0.41
SMARCB1-205ENST00000417137 TMEM170AQ8WVE7 144 aa17.59■□□□□ 0.41
SMARCB1-205ENST00000417137 TRAV30A0A087WSZ9 112 aa17.58■□□□□ 0.4
SMARCB1-205ENST00000417137 CLN5O75503 358 aa17.58■□□□□ 0.4
SMARCB1-205ENST00000417137 TMEM50AO95807 157 aa17.58■□□□□ 0.4
SMARCB1-205ENST00000417137 ELLP55199 621 aaPredicted RBP17.58■□□□□ 0.4
SMARCB1-205ENST00000417137 DCTN2Q13561 401 aaKnown RBP17.58■□□□□ 0.4
SMARCB1-205ENST00000417137 GSG1LQ6UXU4 331 aa17.58■□□□□ 0.4
SMARCB1-205ENST00000417137 AURKAIP1Q9NWT8 199 aaPredicted RBP17.58■□□□□ 0.4
SMARCB1-205ENST00000417137 PAIP2BQ9ULR5 123 aaKnown RBP17.58■□□□□ 0.4
SMARCB1-205ENST00000417137 C2orf70A6NJV1 201 aa17.57■□□□□ 0.4
SMARCB1-205ENST00000417137 A8MWP6 167 aa17.57■□□□□ 0.4
SMARCB1-205ENST00000417137 CCSO14618 274 aa17.57■□□□□ 0.4
SMARCB1-205ENST00000417137 SCGB1D2O95969 90 aa17.57■□□□□ 0.4
SMARCB1-205ENST00000417137 PTTG1O95997 202 aa17.57■□□□□ 0.4
SMARCB1-205ENST00000417137 IGLV1-51P01701 117 aa17.57■□□□□ 0.4
SMARCB1-205ENST00000417137 PRB2P02812 416 aaPredicted RBP17.57■□□□□ 0.4
SMARCB1-205ENST00000417137 POLR2GP62487 172 aaKnown RBP eCLIP17.57■□□□□ 0.4
SMARCB1-205ENST00000417137 MARC2Q969Z3 335 aa17.57■□□□□ 0.4
SMARCB1-205ENST00000417137 C2orf50Q96LR7 162 aa17.57■□□□□ 0.4
SMARCB1-205ENST00000417137 FOLR2P14207 255 aa17.56■□□□□ 0.4
SMARCB1-205ENST00000417137 GPX4P36969 197 aaPredicted RBP17.56■□□□□ 0.4
SMARCB1-205ENST00000417137 SPANXN5Q5MJ07 72 aa17.56■□□□□ 0.4
SMARCB1-205ENST00000417137 UNQ9165/PRO28630Q6UXU0 137 aa17.56■□□□□ 0.4
SMARCB1-205ENST00000417137 TMEM116Q8NCL8 245 aa17.56■□□□□ 0.4
SMARCB1-205ENST00000417137 DYNLRB2Q8TF09 96 aa17.56■□□□□ 0.4
SMARCB1-205ENST00000417137 TMEM190Q8WZ59 177 aa17.56■□□□□ 0.4
SMARCB1-205ENST00000417137 RAB40CQ96S21 281 aa17.56■□□□□ 0.4
SMARCB1-205ENST00000417137 ZNF256Q9Y2P7 627 aaPredicted RBP17.56■□□□□ 0.4
SMARCB1-205ENST00000417137 STRAPQ9Y3F4 350 aaKnown RBP17.56■□□□□ 0.4
SMARCB1-205ENST00000417137 NOTCH1P46531 2555 aa17.56■□□□□ 0.4
SMARCB1-205ENST00000417137 C15orf62A8K5M9 175 aa17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 SSSCA1O60232 199 aa17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 YIF1AO95070 293 aa17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 CBLN1P23435 193 aa17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 CD69Q07108 199 aa17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 PRSS54Q6PEW0 395 aa17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 OR2K2Q8NGT1 345 aa17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 CACNG8Q8WXS5 425 aa17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 SMIM8Q96KF7 97 aa17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 C20orf24Q9BUV8 137 aa17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 DAZ1Q9NQZ3 744 aaKnown RBP17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 TECRQ9NZ01 308 aaKnown RBP17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 PSENENQ9NZ42 101 aa17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 MRPL27Q9P0M9 148 aaKnown RBP17.55■□□□□ 0.4
SMARCB1-205ENST00000417137 K7EMT4 169 aa17.54■□□□□ 0.4
SMARCB1-205ENST00000417137 RND2P52198 227 aa17.54■□□□□ 0.4
SMARCB1-205ENST00000417137 TM4SF20Q53R12 229 aa17.54■□□□□ 0.4
SMARCB1-205ENST00000417137 ZNF600Q6ZNG1 722 aa17.54■□□□□ 0.4
SMARCB1-205ENST00000417137 SLC16A13Q7RTY0 426 aa17.54■□□□□ 0.4
SMARCB1-205ENST00000417137 TMEM213A2RRL7 107 aa17.53■□□□□ 0.4
SMARCB1-205ENST00000417137 MBPP02686 304 aaPredicted RBP17.53■□□□□ 0.4
SMARCB1-205ENST00000417137 SPNP16150 400 aa17.53■□□□□ 0.4
SMARCB1-205ENST00000417137 TAS2R30P59541 319 aa17.53■□□□□ 0.4
SMARCB1-205ENST00000417137 LCN12Q6JVE5 192 aa17.53■□□□□ 0.4
SMARCB1-205ENST00000417137 OR1S2Q8NGQ3 325 aa17.53■□□□□ 0.4
SMARCB1-205ENST00000417137 NPIPB3Q92617 1050 aa17.53■□□□□ 0.4
SMARCB1-205ENST00000417137 SLC35E1Q96K37 410 aa17.53■□□□□ 0.4
SMARCB1-205ENST00000417137 MRPL36Q9P0J6 103 aaKnown RBP17.53■□□□□ 0.4
SMARCB1-205ENST00000417137 HAPLN4Q86UW8 402 aa17.52■□□□□ 0.4
SMARCB1-205ENST00000417137 ACY3Q96HD9 319 aa17.52■□□□□ 0.4
SMARCB1-205ENST00000417137 L7N2F9 121 aa17.51■□□□□ 0.39
SMARCB1-205ENST00000417137 SSNA1O43805 119 aa17.51■□□□□ 0.39
SMARCB1-205ENST00000417137 C8orf88P0DMB2 117 aa17.51■□□□□ 0.39
SMARCB1-205ENST00000417137 OR10J1P30954 320 aa17.51■□□□□ 0.39
SMARCB1-205ENST00000417137 VAMP2P63027 116 aa17.51■□□□□ 0.39
SMARCB1-205ENST00000417137 DEFB114Q30KQ6 69 aa17.51■□□□□ 0.39
SMARCB1-205ENST00000417137 ADAMTSL5Q6ZMM2 481 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms