RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 EDA2RQ9HAV5 297 aa11.67□□□□□ -0.54
ITGB1-204ENST00000417122 RETNQ9HD89 108 aa11.67□□□□□ -0.54
ITGB1-204ENST00000417122 KMT2CQ8NEZ4 4911 aaKnown RBP11.66□□□□□ -0.54
ITGB1-204ENST00000417122 TRAV14DV4A0A0A6YYC5 116 aa11.66□□□□□ -0.54
ITGB1-204ENST00000417122 CEBPZOSA8MTT3 80 aa11.66□□□□□ -0.54
ITGB1-204ENST00000417122 CHEK1O14757 476 aa11.66□□□□□ -0.54
ITGB1-204ENST00000417122 TMEM50AO95807 157 aa11.66□□□□□ -0.54
ITGB1-204ENST00000417122 ANXA3P12429 323 aa11.66□□□□□ -0.54
ITGB1-204ENST00000417122 HTR2BP41595 481 aa11.66□□□□□ -0.54
ITGB1-204ENST00000417122 SUPT4H1P63272 117 aaKnown RBP11.66□□□□□ -0.54
ITGB1-204ENST00000417122 TOMM20LQ6UXN7 152 aa11.66□□□□□ -0.54
ITGB1-204ENST00000417122 ZNF600Q6ZNG1 722 aa11.66□□□□□ -0.54
ITGB1-204ENST00000417122 RNF2Q99496 336 aa11.66□□□□□ -0.54
ITGB1-204ENST00000417122 GINS3Q9BRX5 216 aa11.66□□□□□ -0.54
ITGB1-204ENST00000417122 RHPN1-AS1Q9BWJ2 59 aa11.66□□□□□ -0.54
ITGB1-204ENST00000417122 FNDC4Q9H6D8 234 aaPredicted RBP11.66□□□□□ -0.54
ITGB1-204ENST00000417122 HEYLQ9NQ87 328 aaPredicted RBP11.66□□□□□ -0.54
ITGB1-204ENST00000417122 UBQLN2Q9UHD9 624 aa11.66□□□□□ -0.54
ITGB1-204ENST00000417122 LOC102724200A0A096LPH7 203 aaPredicted RBP11.65□□□□□ -0.54
ITGB1-204ENST00000417122 IGHV3-49A0A0A0MS15 119 aa11.65□□□□□ -0.54
ITGB1-204ENST00000417122 NXPH3O95157 252 aa11.65□□□□□ -0.54
ITGB1-204ENST00000417122 SULT1A3P0DMM9 295 aa11.65□□□□□ -0.54
ITGB1-204ENST00000417122 SULT1A4P0DMN0 295 aa11.65□□□□□ -0.54
ITGB1-204ENST00000417122 LYL1P12980 280 aa11.65□□□□□ -0.54
ITGB1-204ENST00000417122 MLANAQ16655 118 aa11.65□□□□□ -0.54
ITGB1-204ENST00000417122 CASC10Q5T4H9 136 aa11.65□□□□□ -0.54
ITGB1-204ENST00000417122 LGI3Q8N145 548 aa11.65□□□□□ -0.54
ITGB1-204ENST00000417122 DEDD2Q8WXF8 326 aa11.65□□□□□ -0.54
ITGB1-204ENST00000417122 FAM110AQ9BQ89 295 aa11.65□□□□□ -0.54
ITGB1-204ENST00000417122 GGTLC1Q9BX51 225 aa11.65□□□□□ -0.54
ITGB1-204ENST00000417122 MRPL36Q9P0J6 103 aaKnown RBP11.65□□□□□ -0.54
ITGB1-204ENST00000417122 CACFD1Q9UGQ2 172 aa11.65□□□□□ -0.54
ITGB1-204ENST00000417122 PUS1Q9Y606 427 aaKnown RBP eCLIP11.65□□□□□ -0.54
ITGB1-204ENST00000417122 DNAH7Q8WXX0 4024 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 IGHV3OR16-13A0A075B7E8 117 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 IGHV3-74A0A0B4J1X5 117 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 A0A0B4J2A0 478 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 RPS10-NUDT3A0A1W2PQS6 291 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 OR4C46A6NHA9 309 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 CLN5O75503 358 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 CCR6P51684 374 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 C2orf83Q53S99 150 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 SPANXN2Q5MJ10 180 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 LYZL2Q7Z4W2 148 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 TMED4Q7Z7H5 227 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 SLC24A4Q8NFF2 622 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 OR4X1Q8NH49 305 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 ZFAND3Q9H8U3 227 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 SHPKQ9UHJ6 478 aa11.64□□□□□ -0.55
ITGB1-204ENST00000417122 A0A1B0GU03 582 aa11.63□□□□□ -0.55
ITGB1-204ENST00000417122 SCGB2A1O75556 95 aa11.63□□□□□ -0.55
ITGB1-204ENST00000417122 BMI1P35226 326 aa11.63□□□□□ -0.55
ITGB1-204ENST00000417122 SRPXP78539 464 aa11.63□□□□□ -0.55
ITGB1-204ENST00000417122 SMCO1Q147U7 214 aa11.63□□□□□ -0.55
ITGB1-204ENST00000417122 TMEM128Q5BJH2 165 aa11.63□□□□□ -0.55
ITGB1-204ENST00000417122 NMSQ5H8A3 153 aa11.63□□□□□ -0.55
ITGB1-204ENST00000417122 SLC25A21Q9BQT8 299 aaPredicted RBP11.63□□□□□ -0.55
ITGB1-204ENST00000417122 TENM3Q9P273 2699 aa11.62□□□□□ -0.55
ITGB1-204ENST00000417122 PIGBOS1A0A0B4J2F0 54 aa11.62□□□□□ -0.55
ITGB1-204ENST00000417122 TNFRSF9Q07011 255 aa11.62□□□□□ -0.55
ITGB1-204ENST00000417122 ODF3L2Q3SX64 289 aa11.62□□□□□ -0.55
ITGB1-204ENST00000417122 FAM90A2PQ658T7 463 aa11.62□□□□□ -0.55
ITGB1-204ENST00000417122 RNASEH2CQ8TDP1 164 aaKnown RBP11.62□□□□□ -0.55
ITGB1-204ENST00000417122 ST8SIA2Q92186 375 aa11.62□□□□□ -0.55
ITGB1-204ENST00000417122 SRRQ9GZT4 340 aa11.62□□□□□ -0.55
ITGB1-204ENST00000417122 STAB2Q8WWQ8 2551 aa11.61□□□□□ -0.55
ITGB1-204ENST00000417122 IGKV3-7A0A075B6H7 116 aa11.61□□□□□ -0.55
ITGB1-204ENST00000417122 TRAV30A0A087WSZ9 112 aa11.61□□□□□ -0.55
ITGB1-204ENST00000417122 APOHP02749 345 aaPredicted RBP11.61□□□□□ -0.55
ITGB1-204ENST00000417122 CD5P06127 495 aa11.61□□□□□ -0.55
ITGB1-204ENST00000417122 NPY1RP25929 384 aa11.61□□□□□ -0.55
ITGB1-204ENST00000417122 TFPI2P48307 235 aa11.61□□□□□ -0.55
ITGB1-204ENST00000417122 TCF24Q7RTU0 167 aa11.61□□□□□ -0.55
ITGB1-204ENST00000417122 NOXA1Q86UR1 476 aa11.61□□□□□ -0.55
ITGB1-204ENST00000417122 TMEM170AQ8WVE7 144 aa11.61□□□□□ -0.55
ITGB1-204ENST00000417122 VSIRQ9H7M9 311 aa11.61□□□□□ -0.55
ITGB1-204ENST00000417122 HSPB7Q9UBY9 170 aa11.61□□□□□ -0.55
ITGB1-204ENST00000417122 DUXBA0A1W2PPF3 345 aa11.6□□□□□ -0.55
ITGB1-204ENST00000417122 IFNA10P01566 189 aa11.6□□□□□ -0.55
ITGB1-204ENST00000417122 SLC25A4P12235 298 aa11.6□□□□□ -0.55
ITGB1-204ENST00000417122 NPPCP23582 126 aa11.6□□□□□ -0.55
ITGB1-204ENST00000417122 VAMP1P23763 118 aa11.6□□□□□ -0.55
ITGB1-204ENST00000417122 TIGITQ495A1 244 aa11.6□□□□□ -0.55
ITGB1-204ENST00000417122 ZFAND6Q6FIF0 208 aa11.6□□□□□ -0.55
ITGB1-204ENST00000417122 ETFRF1Q6IPR1 90 aa11.6□□□□□ -0.55
ITGB1-204ENST00000417122 PRSS54Q6PEW0 395 aa11.6□□□□□ -0.55
ITGB1-204ENST00000417122 OR1S1Q8NH92 325 aa11.6□□□□□ -0.55
ITGB1-204ENST00000417122 DTD1Q8TEA8 209 aa11.6□□□□□ -0.55
ITGB1-204ENST00000417122 RBKSQ9H477 322 aa11.6□□□□□ -0.55
ITGB1-204ENST00000417122 U3KQ87 197 aa11.6□□□□□ -0.55
ITGB1-204ENST00000417122 IGHV3-66A0A0C4DH42 116 aa11.59□□□□□ -0.55
ITGB1-204ENST00000417122 IGKV1-17P01599 117 aa11.59□□□□□ -0.55
ITGB1-204ENST00000417122 INPP1P49441 399 aa11.59□□□□□ -0.55
ITGB1-204ENST00000417122 RND2P52198 227 aa11.59□□□□□ -0.55
ITGB1-204ENST00000417122 APOC4P55056 127 aa11.59□□□□□ -0.55
ITGB1-204ENST00000417122 CMC4P56277 68 aaPredicted RBP11.59□□□□□ -0.55
ITGB1-204ENST00000417122 PAFAH1B2P68402 229 aa11.59□□□□□ -0.55
ITGB1-204ENST00000417122 RBMS2Q15434 407 aaKnown RBP11.59□□□□□ -0.55
ITGB1-204ENST00000417122 LILRB2Q8N423 598 aa11.59□□□□□ -0.55
ITGB1-204ENST00000417122 GBGT1Q8N5D6 347 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms