RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 MFNGO00587 321 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 NUPL2O15504 423 aaKnown RBP6.75□□□□□ -1.33
LINC01238-201ENST00000416204 IFNA10P01566 189 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 IGHV3-48P01763 117 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 IL5P05113 134 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 AKAIN1P0CW23 69 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 P0DMU3 169 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 FAM231AP0DMU4 169 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 FAM231CP0DMU5 169 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 OR13C7P0DN81 318 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 PTHLHP12272 177 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 C4BPBP20851 252 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 WT1-ASQ06250 92 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 TCF24Q7RTU0 167 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 LILRB2Q8N423 598 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 TMEM229BQ8NBD8 167 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 OR10R2Q8NGX6 335 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 GPX8Q8TED1 209 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 BSCL2Q96G97 398 aaPredicted RBP6.75□□□□□ -1.33
LINC01238-201ENST00000416204 HRH4Q9H3N8 390 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 GPN1Q9HCN4 374 aaPredicted RBP6.75□□□□□ -1.33
LINC01238-201ENST00000416204 C21orf62Q9NYP8 219 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 KLK11Q9UBX7 282 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 OR2W1Q9Y3N9 320 aa6.75□□□□□ -1.33
LINC01238-201ENST00000416204 TRAV6A0A075B6T7 132 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 SNRPGP15A8MWD9 76 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 RGS13O14921 159 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 NDUFB6O95139 128 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 HRASP01112 189 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 APOHP02749 345 aaPredicted RBP6.74□□□□□ -1.33
LINC01238-201ENST00000416204 AMBPP02760 352 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 HIST1H1DP16402 221 aaKnown RBP6.74□□□□□ -1.33
LINC01238-201ENST00000416204 RCVRNP35243 200 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 CCR6P51684 374 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 TAS2R19P59542 299 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 RPL11P62913 178 aaKnown RBP6.74□□□□□ -1.33
LINC01238-201ENST00000416204 EIF4EBP1Q13541 118 aaPredicted RBP6.74□□□□□ -1.33
LINC01238-201ENST00000416204 ARL6IP1Q15041 203 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 NDUFA5Q16718 116 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 LGALS9BQ3B8N2 356 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 RNASE12Q5GAN4 147 aaKnown RBP6.74□□□□□ -1.33
LINC01238-201ENST00000416204 STHQ8IWL8 128 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 VN1R17PQ8TDU5 208 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 SCARB1Q8WTV0 552 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 HYLS1Q96M11 299 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 NDUFAF3Q9BU61 184 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 COMMD5Q9GZQ3 224 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 C20orf85Q9H1P6 137 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 MS4A6AQ9H2W1 248 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 THYN1Q9P016 225 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 X6R8D5 127 aa6.74□□□□□ -1.33
LINC01238-201ENST00000416204 C15orf62A8K5M9 175 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 K7EMT4 169 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 DNASE2O00115 360 aaPredicted RBP6.73□□□□□ -1.33
LINC01238-201ENST00000416204 UPK2O00526 184 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 DFFBO76075 338 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 DIRAS3O95661 229 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 CTSGP08311 255 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 ANXA3P12429 323 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 TBPP20226 339 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 TNP2Q05952 138 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 MEF2DQ14814 521 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 Q6ZR54 194 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 SPAG16Q8N0X2 631 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 NUDCD2Q8WVJ2 157 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 SECTM1Q8WVN6 248 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 ASB13Q8WXK3 278 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 ST8SIA2Q92186 375 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 FAM210AQ96ND0 272 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 HSD17B10Q99714 261 aaKnown RBP6.73□□□□□ -1.33
LINC01238-201ENST00000416204 SLC25A21Q9BQT8 299 aaPredicted RBP6.73□□□□□ -1.33
LINC01238-201ENST00000416204 QTRT1Q9BXR0 403 aaKnown RBP6.73□□□□□ -1.33
LINC01238-201ENST00000416204 SCRT2Q9NQ03 307 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 CCL28Q9NRJ3 127 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 TMEM140Q9NV12 185 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 BET1LQ9NYM9 111 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 RABAC1Q9UI14 185 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 NSG2Q9Y328 171 aa6.73□□□□□ -1.33
LINC01238-201ENST00000416204 TEX50A0A1B0GTY4 177 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 K7EIM0 57 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 ST8SIA3O43173 380 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 CD74P04233 296 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 FCER2P06734 321 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 SERPINE2P07093 398 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 SULT1A3P0DMM9 295 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 SULT1A4P0DMN0 295 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 MIFP14174 115 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 CBX5P45973 191 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 EMP1P54849 157 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 CMC4P56277 68 aaPredicted RBP6.72□□□□□ -1.33
LINC01238-201ENST00000416204 FCN2Q15485 313 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 C1orf134Q5TEV5 83 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 FAM90A2PQ658T7 463 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 STEAP1BQ6NZ63 245 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 SPSB3Q6PJ21 355 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 Q6ZRM9 215 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 DMBX1Q8NFW5 382 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 OR4C16Q8NGL9 310 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 ZFAND1Q8TCF1 268 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 SCP2D1Q9UJQ7 156 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms