RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 GPR12P47775 334 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 EDDM3BP56851 147 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 ZNF718Q3SXZ3 478 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 ZNF295-AS1Q8N0V1 137 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 ZC2HC1AQ96GY0 325 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 ADTRPQ96IZ2 230 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 RTL8AQ9BWD3 113 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 OR1A1Q9P1Q5 309 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 JPT1Q9UK76 154 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 A1L4Q6 167 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 FBLL1A6NHQ2 334 aaKnown RBP6.49□□□□□ -1.37
SIK3-203ENST00000415541 ZNF716A6NP11 495 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 CGAP01215 116 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 ARL14EPLP0DKL9 152 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 HERV-K104P63124 156 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 IZUMO4Q1ZYL8 232 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 IBA57Q5T440 356 aaKnown RBP6.49□□□□□ -1.37
SIK3-203ENST00000415541 OR9G4Q8NGQ1 327 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 FGFBP3Q8TAT2 258 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 ABHD17AQ96GS6 310 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 FAM110AQ9BQ89 295 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 PKIBQ9C010 78 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 MTCH1Q9NZJ7 389 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 OR2W1Q9Y3N9 320 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 A0A1B0GW15 77 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 C5orf63A6NC05 138 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 OR9G9P0C7N8 305 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 MFAP2P55001 183 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 SSBP2P81877 361 aaPredicted RBP6.49□□□□□ -1.37
SIK3-203ENST00000415541 TFF3Q07654 80 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 C10orf128Q5T292 105 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 SSX8Q7RTT4 187 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 TMEM54Q969K7 222 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 ZNF488Q96MN9 340 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 GP6Q9HCN6 339 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 SELENOKQ9Y6D0 94 aa6.49□□□□□ -1.37
SIK3-203ENST00000415541 IGKV1D-13A0A0B4J2D9 117 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 TRBV7-9A0A0J9YWB2 115 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 K7EN84 100 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 SPRY3O43610 288 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 TUSC2O75896 110 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 IGKV1-13P0DP09 117 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 RBM11P57052 281 aaKnown RBP6.48□□□□□ -1.37
SIK3-203ENST00000415541 PSG7Q13046 419 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FOXI2Q6ZQN5 318 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 PLPPR2Q96GM1 343 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 JMJD8Q96S16 334 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 NAA38Q9BRA0 125 aaKnown RBP6.48□□□□□ -1.37
SIK3-203ENST00000415541 ANAPC13Q9BS18 74 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 ATP23Q9Y6H3 246 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A10PA6NDY2 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A18PA6NE21 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A16PA6NEW6 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A20PA6NIJ5 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A8PA6NJQ4 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A7PA6NKC0 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A22PA8MWA6 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A12PA8MX19 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A5PA8MXJ8 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A23PA8MXZ1 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 DLL1O00548 723 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 SCTP09683 121 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FRMD6-AS1P0C7T7 363 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A15PP0C7V4 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A13PP0C7W8 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A14PP0C7W9 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A24PP0C7X0 464 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 GNG3P63215 75 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 CENPWQ5EE01 88 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 Q6ZRM9 215 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 WIPF2Q8TF74 440 aaPredicted RBP6.48□□□□□ -1.37
SIK3-203ENST00000415541 C11orf52Q96A22 123 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.48□□□□□ -1.37
SIK3-203ENST00000415541 YTHDF2Q9Y5A9 579 aaKnown RBP6.48□□□□□ -1.37
SIK3-203ENST00000415541 SHANK1Q9Y566 2161 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 NCOA6Q14686 2063 aaPredicted RBP6.48□□□□□ -1.37
SIK3-203ENST00000415541 NOTCH2Q04721 2471 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 KBTBD11-OT1A0A1B0GTJ5 212 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 FAM90A27PA6NNH2 459 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 CNIH1O95406 144 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 WT1P19544 449 aaPredicted RBP6.48□□□□□ -1.37
SIK3-203ENST00000415541 B3GALT5-AS1P59052 145 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 SPACA3Q8IXA5 215 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 OR52E5Q8NH55 327 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 GALMQ96C23 342 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 LYZL4Q96KX0 146 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 SPRR3Q9UBC9 169 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 WDFY4Q6ZS81 3184 aa6.48□□□□□ -1.37
SIK3-203ENST00000415541 SPINK8P0C7L1 97 aa6.47□□□□□ -1.37
SIK3-203ENST00000415541 FXYD3Q14802 87 aa6.47□□□□□ -1.37
SIK3-203ENST00000415541 PQLC2Q6ZP29 291 aa6.47□□□□□ -1.37
SIK3-203ENST00000415541 GPR82Q96P67 336 aa6.47□□□□□ -1.37
SIK3-203ENST00000415541 HILPDAQ9Y5L2 63 aa6.47□□□□□ -1.37
SIK3-203ENST00000415541 WDFY3Q8IZQ1 3526 aa6.47□□□□□ -1.37
SIK3-203ENST00000415541 SMIM27A0A1W2PRY6 76 aa6.47□□□□□ -1.37
SIK3-203ENST00000415541 GCHFRP30047 84 aa6.47□□□□□ -1.37
SIK3-203ENST00000415541 TAS2R45P59539 299 aa6.47□□□□□ -1.37
SIK3-203ENST00000415541 ZNF808Q8N4W9 903 aaPredicted RBP6.47□□□□□ -1.37
SIK3-203ENST00000415541 VGLL1Q99990 258 aa6.47□□□□□ -1.37
SIK3-203ENST00000415541 HINT2Q9BX68 163 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms