RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 COMMD3Q9UBI1 195 aa14.03□□□□□ -0.16
UBXN4-202ENST00000415164 SMIM31A0A1B0GVY4 71 aa14.02□□□□□ -0.17
UBXN4-202ENST00000415164 M0QYG6 137 aa14.02□□□□□ -0.17
UBXN4-202ENST00000415164 SCGB2A1O75556 95 aa14.02□□□□□ -0.17
UBXN4-202ENST00000415164 PI3P19957 117 aa14.02□□□□□ -0.17
UBXN4-202ENST00000415164 P2RY1P47900 373 aa14.02□□□□□ -0.17
UBXN4-202ENST00000415164 SUB1P53999 127 aaKnown RBP eCLIP14.02□□□□□ -0.17
UBXN4-202ENST00000415164 MORN3Q6PF18 240 aaPredicted RBP14.02□□□□□ -0.17
UBXN4-202ENST00000415164 ZNF767PQ75MW2 155 aa14.02□□□□□ -0.17
UBXN4-202ENST00000415164 RNASE11Q8TAA1 199 aaKnown RBP14.02□□□□□ -0.17
UBXN4-202ENST00000415164 GPX8Q8TED1 209 aa14.02□□□□□ -0.17
UBXN4-202ENST00000415164 HRH4Q9H3N8 390 aa14.02□□□□□ -0.17
UBXN4-202ENST00000415164 K7EQG2 157 aa14.01□□□□□ -0.17
UBXN4-202ENST00000415164 SPP1P10451 314 aa14.01□□□□□ -0.17
UBXN4-202ENST00000415164 RCVRNP35243 200 aa14.01□□□□□ -0.17
UBXN4-202ENST00000415164 ETV6P41212 452 aa14.01□□□□□ -0.17
UBXN4-202ENST00000415164 TMEM41BQ5BJD5 291 aa14.01□□□□□ -0.17
UBXN4-202ENST00000415164 TBC1D24Q9ULP9 559 aa14.01□□□□□ -0.17
UBXN4-202ENST00000415164 FAT2Q9NYQ8 4349 aa14□□□□□ -0.17
UBXN4-202ENST00000415164 ELOA3CA0A087WX78 387 aaPredicted RBP14□□□□□ -0.17
UBXN4-202ENST00000415164 IGKV1-5P01602 117 aa14□□□□□ -0.17
UBXN4-202ENST00000415164 GIG44P09565 113 aaPredicted RBP14□□□□□ -0.17
UBXN4-202ENST00000415164 UCP3P55916 312 aa14□□□□□ -0.17
UBXN4-202ENST00000415164 DHRS2Q13268 280 aa14□□□□□ -0.17
UBXN4-202ENST00000415164 MLANAQ16655 118 aa14□□□□□ -0.17
UBXN4-202ENST00000415164 TRIM16LQ309B1 348 aa14□□□□□ -0.17
UBXN4-202ENST00000415164 GRAMD2BQ96HH9 432 aa14□□□□□ -0.17
UBXN4-202ENST00000415164 MRPL36Q9P0J6 103 aaKnown RBP14□□□□□ -0.17
UBXN4-202ENST00000415164 DNAH2Q9P225 4427 aa14□□□□□ -0.17
UBXN4-202ENST00000415164 A0A0B4J293 547 aa13.99□□□□□ -0.17
UBXN4-202ENST00000415164 CORTO00230 105 aa13.99□□□□□ -0.17
UBXN4-202ENST00000415164 CLN5O75503 358 aa13.99□□□□□ -0.17
UBXN4-202ENST00000415164 RNASE2P10153 161 aaKnown RBP13.99□□□□□ -0.17
UBXN4-202ENST00000415164 PIGPP57054 158 aa13.99□□□□□ -0.17
UBXN4-202ENST00000415164 TIGITQ495A1 244 aa13.99□□□□□ -0.17
UBXN4-202ENST00000415164 PSMG4Q5JS54 123 aa13.99□□□□□ -0.17
UBXN4-202ENST00000415164 TP53RKQ96S44 253 aa13.99□□□□□ -0.17
UBXN4-202ENST00000415164 SCPEP1Q9HB40 452 aa13.99□□□□□ -0.17
UBXN4-202ENST00000415164 CELA1Q9UNI1 258 aa13.99□□□□□ -0.17
UBXN4-202ENST00000415164 X6R8D5 127 aa13.99□□□□□ -0.17
UBXN4-202ENST00000415164 ATG12O94817 140 aa13.98□□□□□ -0.17
UBXN4-202ENST00000415164 EIF2B2P49770 351 aaKnown RBP13.98□□□□□ -0.17
UBXN4-202ENST00000415164 PVRIGQ6DKI7 326 aa13.98□□□□□ -0.17
UBXN4-202ENST00000415164 FNDC4Q9H6D8 234 aaPredicted RBP13.98□□□□□ -0.17
UBXN4-202ENST00000415164 DEFB131BA0A096LNP1 70 aa13.97□□□□□ -0.17
UBXN4-202ENST00000415164 ZNF705EA8MWA4 302 aaPredicted RBP13.97□□□□□ -0.17
UBXN4-202ENST00000415164 M0R2N4 97 aa13.97□□□□□ -0.17
UBXN4-202ENST00000415164 CRYBB3P26998 211 aa13.97□□□□□ -0.17
UBXN4-202ENST00000415164 SP6Q3SY56 376 aa13.97□□□□□ -0.17
UBXN4-202ENST00000415164 LINC00336Q6ZUF6 198 aa13.97□□□□□ -0.17
UBXN4-202ENST00000415164 OR4X1Q8NH49 305 aa13.97□□□□□ -0.17
UBXN4-202ENST00000415164 C3orf85A0A1B0GTC6 90 aa13.96□□□□□ -0.17
UBXN4-202ENST00000415164 HELTA6NFD8 242 aa13.96□□□□□ -0.17
UBXN4-202ENST00000415164 FAM25AB3EWG3 89 aa13.96□□□□□ -0.17
UBXN4-202ENST00000415164 FAM25CB3EWG5 89 aa13.96□□□□□ -0.17
UBXN4-202ENST00000415164 FAM25GB3EWG6 89 aa13.96□□□□□ -0.17
UBXN4-202ENST00000415164 KCTD21Q4G0X4 260 aa13.96□□□□□ -0.17
UBXN4-202ENST00000415164 RNASE10Q5GAN6 216 aaKnown RBP13.96□□□□□ -0.17
UBXN4-202ENST00000415164 DCANP1Q8TF63 244 aa13.96□□□□□ -0.17
UBXN4-202ENST00000415164 RRNAD1Q96FB5 475 aaKnown RBP13.96□□□□□ -0.17
UBXN4-202ENST00000415164 RNF126Q9BV68 326 aa13.96□□□□□ -0.17
UBXN4-202ENST00000415164 VCX3AQ9NNX9 186 aa13.96□□□□□ -0.17
UBXN4-202ENST00000415164 COPZ2Q9P299 210 aa13.96□□□□□ -0.17
UBXN4-202ENST00000415164 DNAH17Q9UFH2 4485 aa13.96□□□□□ -0.18
UBXN4-202ENST00000415164 HPGDSO60760 199 aa13.95□□□□□ -0.18
UBXN4-202ENST00000415164 APOA1P02647 267 aa13.95□□□□□ -0.18
UBXN4-202ENST00000415164 RND3P61587 244 aa13.95□□□□□ -0.18
UBXN4-202ENST00000415164 YIPF6Q96EC8 236 aa13.95□□□□□ -0.18
UBXN4-202ENST00000415164 RAB40CQ96S21 281 aa13.95□□□□□ -0.18
UBXN4-202ENST00000415164 XCL2Q9UBD3 114 aa13.95□□□□□ -0.18
UBXN4-202ENST00000415164 RYR1P21817 5038 aa13.95□□□□□ -0.18
UBXN4-202ENST00000415164 RPS10-NUDT3A0A1W2PQS6 291 aa13.94□□□□□ -0.18
UBXN4-202ENST00000415164 INS-IGF2F8WCM5 200 aa13.94□□□□□ -0.18
UBXN4-202ENST00000415164 HNRNPCP07910 306 aaKnown RBP eCLIP13.94□□□□□ -0.185e-7■■■■□ 20.8
UBXN4-202ENST00000415164 ELK1P19419 428 aa13.94□□□□□ -0.18
UBXN4-202ENST00000415164 C12orf74Q32Q52 190 aa13.94□□□□□ -0.18
UBXN4-202ENST00000415164 Q8WTZ3 238 aa13.94□□□□□ -0.18
UBXN4-202ENST00000415164 ZNF486Q96H40 463 aaPredicted RBP13.94□□□□□ -0.18
UBXN4-202ENST00000415164 PKHD1P08F94 4074 aa13.94□□□□□ -0.18
UBXN4-202ENST00000415164 AGRNO00468 2067 aa13.94□□□□□ -0.18
UBXN4-202ENST00000415164 DYNC1H1Q14204 4646 aaKnown RBP13.94□□□□□ -0.18
UBXN4-202ENST00000415164 TRAV30A0A087WSZ9 112 aa13.93□□□□□ -0.18
UBXN4-202ENST00000415164 A0A0G2JRQ6 117 aa13.93□□□□□ -0.18
UBXN4-202ENST00000415164 IGKV1-17P01599 117 aa13.93□□□□□ -0.18
UBXN4-202ENST00000415164 EMP1P54849 157 aa13.93□□□□□ -0.18
UBXN4-202ENST00000415164 NUTF2P61970 127 aaKnown RBP13.93□□□□□ -0.18
UBXN4-202ENST00000415164 NCS1P62166 190 aa13.93□□□□□ -0.18
UBXN4-202ENST00000415164 SCGB2B2Q4G0G5 96 aa13.93□□□□□ -0.18
UBXN4-202ENST00000415164 CCDC71LQ8N9Z2 235 aa13.93□□□□□ -0.18
UBXN4-202ENST00000415164 NDUFAF3Q9BU61 184 aa13.93□□□□□ -0.18
UBXN4-202ENST00000415164 SCRT1Q9BWW7 348 aa13.93□□□□□ -0.18
UBXN4-202ENST00000415164 HEYLQ9NQ87 328 aaPredicted RBP13.93□□□□□ -0.18
UBXN4-202ENST00000415164 PRSS29PA6NIE9 313 aa13.92□□□□□ -0.18
UBXN4-202ENST00000415164 AMBPP02760 352 aa13.92□□□□□ -0.18
UBXN4-202ENST00000415164 CD3DP04234 171 aa13.92□□□□□ -0.18
UBXN4-202ENST00000415164 P0C879 139 aa13.92□□□□□ -0.18
UBXN4-202ENST00000415164 P0DMU3 169 aa13.92□□□□□ -0.18
UBXN4-202ENST00000415164 FAM231AP0DMU4 169 aa13.92□□□□□ -0.18
UBXN4-202ENST00000415164 FAM231CP0DMU5 169 aa13.92□□□□□ -0.18
UBXN4-202ENST00000415164 NPY1RP25929 384 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms