RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ZNF414Q96IQ9 312 aa10.29□□□□□ -0.76
CNN3-203ENST00000415017 CXorf58Q96LI9 332 aa10.29□□□□□ -0.76
CNN3-203ENST00000415017 CCDC140Q96MF4 163 aa10.29□□□□□ -0.76
CNN3-203ENST00000415017 MS4A10Q96PG2 267 aa10.29□□□□□ -0.76
CNN3-203ENST00000415017 TXN2Q99757 166 aa10.29□□□□□ -0.76
CNN3-203ENST00000415017 ADARB2-AS1A8MUL3 147 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 PFDN1O60925 122 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 CD28P10747 220 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 CXCL2P19875 107 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 TPPP2P59282 170 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 OR2F1Q13607 317 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 LGALSLQ3ZCW2 172 aaPredicted RBP10.28□□□□□ -0.76
CNN3-203ENST00000415017 LAMTOR1Q6IAA8 161 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 ETFRF1Q6IPR1 90 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 LCNL1Q6ZST4 164 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 SLC16A13Q7RTY0 426 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 STX12Q86Y82 276 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 KCNRGQ8N5I3 272 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 OR4X2Q8NGF9 303 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 MISP3Q96FF7 219 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 C19orf24Q9BVV8 132 aa10.28□□□□□ -0.76
CNN3-203ENST00000415017 LSM4Q9Y4Z0 139 aaKnown RBP10.28□□□□□ -0.76
CNN3-203ENST00000415017 IGKV1OR2-108A0A075B7D4 117 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.27□□□□□ -0.77
CNN3-203ENST00000415017 TRBV7-1A0A0A6YYK4 115 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 RPS10-NUDT3A0A1W2PQS6 291 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 I3L521 148 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 ARPC5O15511 151 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 HBG1P69891 147 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 HBG2P69892 147 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 DEFA5Q01523 94 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 ATP5G2Q06055 141 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 SLC38A11Q08AI6 406 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 ZFP69Q49AA0 526 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 OR8G2PQ6IF36 304 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 C9orf62Q8N4C0 152 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 THAP8Q8NA92 274 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 INO80EQ8NBZ0 244 aaPredicted RBP10.27□□□□□ -0.77
CNN3-203ENST00000415017 OR5C1Q8NGR4 320 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 PPP1R14BQ96C90 147 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 CITED1Q99966 193 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 MFFQ9GZY8 342 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 ZNF355PQ9NSJ1 428 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 C21orf62Q9NYP8 219 aa10.27□□□□□ -0.77
CNN3-203ENST00000415017 ANK2Q01484 3957 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 IGKV1D-37A0A075B6S9 117 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 A0A0D9SG52 128 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 CLN5O75503 358 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 CTSGP08311 255 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 OPRK1P41145 380 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 FAM209BQ5JX69 171 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 TREML4Q6UXN2 200 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 TMEM144Q7Z5S9 345 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 OR1S2Q8NGQ3 325 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 TMEM158Q8WZ71 300 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 EEF1AKMT3Q96AZ1 226 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 PARD6GQ9BYG4 376 aaPredicted RBP10.26□□□□□ -0.77
CNN3-203ENST00000415017 GNB4Q9HAV0 340 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 WFDC1Q9HC57 220 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 NPVFQ9HCQ7 196 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 CYTL1Q9NRR1 136 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 FBXL17Q9UF56 701 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 WDR83OSQ9Y284 106 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 VWFP04275 2813 aa10.26□□□□□ -0.77
CNN3-203ENST00000415017 LGALS1P09382 135 aaKnown RBP10.25□□□□□ -0.77
CNN3-203ENST00000415017 IGLC1P0CG04 106 aa10.25□□□□□ -0.77
CNN3-203ENST00000415017 ADMP35318 185 aa10.25□□□□□ -0.77
CNN3-203ENST00000415017 NUP62P37198 522 aaPredicted RBP10.25□□□□□ -0.77
CNN3-203ENST00000415017 EIF2B2P49770 351 aaKnown RBP10.25□□□□□ -0.77
CNN3-203ENST00000415017 MFAP4P55083 255 aa10.25□□□□□ -0.77
CNN3-203ENST00000415017 TMEM217Q8N7C4 229 aa10.25□□□□□ -0.77
CNN3-203ENST00000415017 C4orf3Q8WVX3 66 aa10.25□□□□□ -0.77
CNN3-203ENST00000415017 CITED2Q99967 270 aaPredicted RBP10.25□□□□□ -0.77
CNN3-203ENST00000415017 TMEM147Q9BVK8 224 aa10.25□□□□□ -0.77
CNN3-203ENST00000415017 TSSC4Q9Y5U2 329 aaPredicted RBP10.25□□□□□ -0.77
CNN3-203ENST00000415017 IGHV3-21A0A0B4J1V1 117 aa10.24□□□□□ -0.77
CNN3-203ENST00000415017 TAAR5O14804 337 aa10.24□□□□□ -0.77
CNN3-203ENST00000415017 IGKV1-17P01599 117 aa10.24□□□□□ -0.77
CNN3-203ENST00000415017 IGHV3-48P01763 117 aa10.24□□□□□ -0.77
CNN3-203ENST00000415017 NPBWR1P48145 328 aa10.24□□□□□ -0.77
CNN3-203ENST00000415017 RND2P52198 227 aa10.24□□□□□ -0.77
CNN3-203ENST00000415017 RIPPLY3P57055 190 aa10.24□□□□□ -0.77
CNN3-203ENST00000415017 NPIPB3Q92617 1050 aa10.24□□□□□ -0.77
CNN3-203ENST00000415017 SLC35E1Q96K37 410 aa10.24□□□□□ -0.77
CNN3-203ENST00000415017 ATP5SQ99766 215 aa10.24□□□□□ -0.77
CNN3-203ENST00000415017 ZNF747Q9BV97 191 aa10.24□□□□□ -0.77
CNN3-203ENST00000415017 ARV1Q9H2C2 271 aa10.24□□□□□ -0.77
CNN3-203ENST00000415017 UQCC1Q9NVA1 299 aa10.24□□□□□ -0.77
CNN3-203ENST00000415017 GAR1Q9NY12 217 aaKnown RBP10.24□□□□□ -0.77
CNN3-203ENST00000415017 PAIP2BQ9ULR5 123 aaKnown RBP10.24□□□□□ -0.77
CNN3-203ENST00000415017 TRAV30A0A087WSZ9 112 aa10.23□□□□□ -0.77
CNN3-203ENST00000415017 TCRBV4S1A1TA0A5B7 111 aa10.23□□□□□ -0.77
CNN3-203ENST00000415017 DFFBO76075 338 aa10.23□□□□□ -0.77
CNN3-203ENST00000415017 TRBV12-3P01733 135 aa10.23□□□□□ -0.77
CNN3-203ENST00000415017 CLEC3BP05452 202 aa10.23□□□□□ -0.77
CNN3-203ENST00000415017 FHL3Q13643 280 aa10.23□□□□□ -0.77
CNN3-203ENST00000415017 SPSB3Q6PJ21 355 aa10.23□□□□□ -0.77
CNN3-203ENST00000415017 C18orf65Q6ZTR6 163 aa10.23□□□□□ -0.77
CNN3-203ENST00000415017 TMUB2Q71RG4 321 aa10.23□□□□□ -0.77
CNN3-203ENST00000415017 NDUFA11Q86Y39 141 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms