RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 A0A0B4J2A0 478 aa8.42□□□□□ -1.06
RFFL-204ENST00000414419 RPS10-NUDT3A0A1W2PQS6 291 aa8.42□□□□□ -1.06
RFFL-204ENST00000414419 NXPH3O95157 252 aa8.42□□□□□ -1.06
RFFL-204ENST00000414419 VAMP1P23763 118 aa8.42□□□□□ -1.06
RFFL-204ENST00000414419 BMI1P35226 326 aa8.42□□□□□ -1.06
RFFL-204ENST00000414419 CCR6P51684 374 aa8.42□□□□□ -1.06
RFFL-204ENST00000414419 HAGHQ16775 308 aa8.42□□□□□ -1.06
RFFL-204ENST00000414419 AARDQ4LEZ3 155 aa8.42□□□□□ -1.06
RFFL-204ENST00000414419 NOXA1Q86UR1 476 aa8.42□□□□□ -1.06
RFFL-204ENST00000414419 TMEM116Q8NCL8 245 aa8.42□□□□□ -1.06
RFFL-204ENST00000414419 SPAG8Q99932 426 aaPredicted RBP8.42□□□□□ -1.06
RFFL-204ENST00000414419 PRR13Q9NZ81 148 aa8.42□□□□□ -1.06
RFFL-204ENST00000414419 SHPKQ9UHJ6 478 aa8.42□□□□□ -1.06
RFFL-204ENST00000414419 TMEM50AO95807 157 aa8.41□□□□□ -1.06
RFFL-204ENST00000414419 SUPT4H1P63272 117 aaKnown RBP8.41□□□□□ -1.06
RFFL-204ENST00000414419 SMCO1Q147U7 214 aa8.41□□□□□ -1.06
RFFL-204ENST00000414419 ZNF600Q6ZNG1 722 aa8.41□□□□□ -1.06
RFFL-204ENST00000414419 LYZL2Q7Z4W2 148 aa8.41□□□□□ -1.06
RFFL-204ENST00000414419 SLC24A4Q8NFF2 622 aa8.41□□□□□ -1.06
RFFL-204ENST00000414419 OR1S1Q8NH92 325 aa8.41□□□□□ -1.06
RFFL-204ENST00000414419 SRRQ9GZT4 340 aa8.41□□□□□ -1.06
RFFL-204ENST00000414419 SMPXQ9UHP9 88 aa8.41□□□□□ -1.06
RFFL-204ENST00000414419 STAB2Q8WWQ8 2551 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 TRAV30A0A087WSZ9 112 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 IGHV7-4-1A0A0J9YVY3 117 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 DUXBA0A1W2PPF3 345 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 NAP1L6A6NFF2 107 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 CENPXA8MT69 81 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 TSPAN4O14817 238 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 CLN5O75503 358 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 IFNA10P01566 189 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 TNFRSF9Q07011 255 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 RBMS2Q15434 407 aaKnown RBP8.4□□□□□ -1.06
RFFL-204ENST00000414419 BSXQ3C1V8 233 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 C2orf83Q53S99 150 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 PVRIGQ6DKI7 326 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 ETFRF1Q6IPR1 90 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 CENPSQ8N2Z9 138 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 OR4X1Q8NH49 305 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 RNASEH2CQ8TDP1 164 aaKnown RBP8.4□□□□□ -1.06
RFFL-204ENST00000414419 OR10C1Q96KK4 312 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 RHPN1-AS1Q9BWJ2 59 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 WFDC10AQ9H1F0 79 aa8.4□□□□□ -1.06
RFFL-204ENST00000414419 TENM3Q9P273 2699 aa8.4□□□□□ -1.07
RFFL-204ENST00000414419 IGHV3-49A0A0A0MS15 119 aa8.39□□□□□ -1.07
RFFL-204ENST00000414419 A0A1B0GU03 582 aa8.39□□□□□ -1.07
RFFL-204ENST00000414419 OR4C46A6NHA9 309 aa8.39□□□□□ -1.07
RFFL-204ENST00000414419 CHEK1O14757 476 aa8.39□□□□□ -1.07
RFFL-204ENST00000414419 CD5P06127 495 aa8.39□□□□□ -1.07
RFFL-204ENST00000414419 SLC25A4P12235 298 aa8.39□□□□□ -1.07
RFFL-204ENST00000414419 NPY1RP25929 384 aa8.39□□□□□ -1.07
RFFL-204ENST00000414419 MLANAQ16655 118 aa8.39□□□□□ -1.07
RFFL-204ENST00000414419 NMSQ5H8A3 153 aa8.39□□□□□ -1.07
RFFL-204ENST00000414419 TOMM20LQ6UXN7 152 aa8.39□□□□□ -1.07
RFFL-204ENST00000414419 DTD1Q8TEA8 209 aa8.39□□□□□ -1.07
RFFL-204ENST00000414419 FNDC4Q9H6D8 234 aaPredicted RBP8.39□□□□□ -1.07
RFFL-204ENST00000414419 PUS1Q9Y606 427 aaKnown RBP eCLIP8.39□□□□□ -1.07
RFFL-204ENST00000414419 U3KQ87 197 aa8.39□□□□□ -1.07
RFFL-204ENST00000414419 IGHV3OR16-13A0A075B7E8 117 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 LOC102724200A0A096LPH7 203 aaPredicted RBP8.38□□□□□ -1.07
RFFL-204ENST00000414419 IGHV3-74A0A0B4J1X5 117 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 LINC00854A0A1B0GVQ3 168 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 A0A1W2PS18 150 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 RBMY1BA6NDE4 496 aaKnown RBP8.38□□□□□ -1.07
RFFL-204ENST00000414419 RBMY1EA6NEQ0 496 aaKnown RBP8.38□□□□□ -1.07
RFFL-204ENST00000414419 C3orf84H3BNL1 204 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 SFT2D2O95562 160 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 RBMY1DP0C7P1 496 aaKnown RBP8.38□□□□□ -1.07
RFFL-204ENST00000414419 NPPCP23582 126 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 PAFAH1B2P68402 229 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 BAK1Q16611 211 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 LINC00322Q6ZN03 302 aaPredicted RBP8.38□□□□□ -1.07
RFFL-204ENST00000414419 NARS2Q96I59 477 aaKnown RBP8.38□□□□□ -1.07
RFFL-204ENST00000414419 CITED4Q96RK1 184 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 RNF2Q99496 336 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 RBKSQ9H477 322 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 TMEM231Q9H6L2 316 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 HSPB7Q9UBY9 170 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 UBQLN2Q9UHD9 624 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 NBEAL2Q6ZNJ1 2754 aa8.38□□□□□ -1.07
RFFL-204ENST00000414419 IGKV3-7A0A075B6H7 116 aa8.37□□□□□ -1.07
RFFL-204ENST00000414419 MED6O75586 246 aa8.37□□□□□ -1.07
RFFL-204ENST00000414419 IFNA4P05014 189 aa8.37□□□□□ -1.07
RFFL-204ENST00000414419 TFPI2P48307 235 aa8.37□□□□□ -1.07
RFFL-204ENST00000414419 RND2P52198 227 aa8.37□□□□□ -1.07
RFFL-204ENST00000414419 CMC4P56277 68 aaPredicted RBP8.37□□□□□ -1.07
RFFL-204ENST00000414419 ATP5IP56385 69 aaPredicted RBP8.37□□□□□ -1.07
RFFL-204ENST00000414419 UBE2MP61081 183 aaKnown RBP8.37□□□□□ -1.07
RFFL-204ENST00000414419 RPL11P62913 178 aaKnown RBP8.37□□□□□ -1.07
RFFL-204ENST00000414419 PPP1R1AQ13522 171 aa8.37□□□□□ -1.07
RFFL-204ENST00000414419 TIGITQ495A1 244 aa8.37□□□□□ -1.07
RFFL-204ENST00000414419 LRTM2Q8N967 370 aa8.37□□□□□ -1.07
RFFL-204ENST00000414419 OR1S2Q8NGQ3 325 aa8.37□□□□□ -1.07
RFFL-204ENST00000414419 MUC7Q8TAX7 377 aa8.37□□□□□ -1.07
RFFL-204ENST00000414419 Q8WTZ3 238 aa8.37□□□□□ -1.07
RFFL-204ENST00000414419 METTL26Q96S19 204 aa8.37□□□□□ -1.07
RFFL-204ENST00000414419 C7orf50Q9BRJ6 194 aaKnown RBP8.37□□□□□ -1.07
RFFL-204ENST00000414419 GGTLC1Q9BX51 225 aa8.37□□□□□ -1.07
RFFL-204ENST00000414419 MRPL36Q9P0J6 103 aaKnown RBP8.37□□□□□ -1.07
RFFL-204ENST00000414419 TMED3Q9Y3Q3 217 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 259.8 ms