RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 KLF9Q13886 244 aaPredicted RBP7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 TOMM20LQ6UXN7 152 aa7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 WFDC3Q8IUB2 231 aa7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 FAM219AQ8IW50 185 aa7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 GBGT1Q8N5D6 347 aa7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 TMEM116Q8NCL8 245 aa7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 ATP6V0BQ99437 205 aa7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 RBM38Q9H0Z9 239 aaKnown RBP7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 FNDC4Q9H6D8 234 aaPredicted RBP7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 TMEM56-RWDD3S4R434 201 aa7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 A0A1B0GU03 582 aa7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 LINC00854A0A1B0GVQ3 168 aa7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 INS-IGF2F8WCM5 200 aa7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 CHEK1O14757 476 aa7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 TSPAN4O14817 238 aa7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 LYL1P12980 280 aa7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 FCGR2BP31994 310 aaPredicted RBP7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 FAUP35544 74 aaKnown RBP7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 SUPT4H1P63272 117 aaKnown RBP7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 ZNF79Q15937 498 aa7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 CASC10Q5T4H9 136 aa7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 CCDC190Q86UF4 302 aa7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 LILRB2Q8N423 598 aa7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 OR52E5Q8NH55 327 aa7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 SPAG8Q99932 426 aaPredicted RBP7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 PUS1Q9Y606 427 aaKnown RBP eCLIP7.59□□□□□ -1.19
NCKIPSD-202ENST00000413374 LOC102724200A0A096LPH7 203 aaPredicted RBP7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 SULT1A3P0DMM9 295 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 SULT1A4P0DMN0 295 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 ANXA3P12429 323 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 RPL35AP18077 110 aaKnown RBP7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 HTR2BP41595 481 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 AP3S2P59780 193 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 RPL11P62913 178 aaKnown RBP7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 ZNF124Q15973 351 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 TIGITQ495A1 244 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 PVRIGQ6DKI7 326 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 ZNF600Q6ZNG1 722 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 APRG1Q8IVJ8 170 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 LGI3Q8N145 548 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 ST8SIA2Q92186 375 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 TRIM63Q969Q1 353 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 GALNT14Q96FL9 552 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 OR10C1Q96KK4 312 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 GGTLC1Q9BX51 225 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 EDA2RQ9HAV5 297 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 DNAH7Q8WXX0 4024 aa7.58□□□□□ -1.2
NCKIPSD-202ENST00000413374 OR4C46A6NHA9 309 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 CORTO00230 105 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 CLN5O75503 358 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 DFFBO76075 338 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 IFNA10P01566 189 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 VAMP1P23763 118 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 INPP1P49441 399 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 CCR6P51684 374 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 BAK1Q16611 211 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 BSXQ3C1V8 233 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 ODF3L2Q3SX64 289 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 TCF24Q7RTU0 167 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 SLC24A4Q8NFF2 622 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 OR4X1Q8NH49 305 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 OR1S1Q8NH92 325 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 TMEM170AQ8WVE7 144 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 IL22RA2Q969J5 263 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 RBKSQ9H477 322 aa7.57□□□□□ -1.2
NCKIPSD-202ENST00000413374 A0A0B4J2A0 478 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 RPS10-NUDT3A0A1W2PQS6 291 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 RND2P52198 227 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 SMCO1Q147U7 214 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 AARDQ4LEZ3 155 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 C2orf83Q53S99 150 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 NMSQ5H8A3 153 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 SPANXN2Q5MJ10 180 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 DTD1Q8TEA8 209 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 NPIPB3Q92617 1050 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 ACY3Q96HD9 319 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 GINS3Q9BRX5 216 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 SRRQ9GZT4 340 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 ZFAND3Q9H8U3 227 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 SHPKQ9UHJ6 478 aa7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 PAIP2BQ9ULR5 123 aaKnown RBP7.56□□□□□ -1.2
NCKIPSD-202ENST00000413374 ZNF701M0R085 212 aaPredicted RBP7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 DNASE2O00115 360 aaPredicted RBP7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 IGKV1-17P01599 117 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 HOXB5P09067 269 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 IAPPP10997 89 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 NPPCP23582 126 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 NPY1RP25929 384 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 PAFAH1B2P68402 229 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 TNFRSF9Q07011 255 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 PPP1R1AQ13522 171 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 RBMS2Q15434 407 aaKnown RBP7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 TMEM128Q5BJH2 165 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 TRIQKQ629K1 86 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 FAM90A2PQ658T7 463 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 PRSS54Q6PEW0 395 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 Q8WTZ3 238 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 OVOL2Q9BRP0 275 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 FLVCR2Q9UPI3 526 aa7.55□□□□□ -1.2
NCKIPSD-202ENST00000413374 TRAV30A0A087WSZ9 112 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms