RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 CACNG5Q9UF02 275 aa13.88□□□□□ -0.19
ITGA6-204ENST00000412899 UBQLN2Q9UHD9 624 aa13.88□□□□□ -0.19
ITGA6-204ENST00000412899 TP53TG1Q9Y2A0 90 aa13.88□□□□□ -0.19
ITGA6-204ENST00000412899 HYDINQ4G0P3 5121 aa13.87□□□□□ -0.19
ITGA6-204ENST00000412899 BMI1P35226 326 aa13.87□□□□□ -0.19
ITGA6-204ENST00000412899 SPCS3P61009 180 aa13.87□□□□□ -0.19
ITGA6-204ENST00000412899 Q56UQ5 140 aa13.87□□□□□ -0.19
ITGA6-204ENST00000412899 TMEM128Q5BJH2 165 aa13.87□□□□□ -0.19
ITGA6-204ENST00000412899 Q6ZWC4 215 aa13.87□□□□□ -0.19
ITGA6-204ENST00000412899 LYG2Q86SG7 212 aa13.87□□□□□ -0.19
ITGA6-204ENST00000412899 WFDC3Q8IUB2 231 aa13.87□□□□□ -0.19
ITGA6-204ENST00000412899 LGI3Q8N145 548 aa13.87□□□□□ -0.19
ITGA6-204ENST00000412899 NAP1L6A6NFF2 107 aa13.86□□□□□ -0.19
ITGA6-204ENST00000412899 INS-IGF2F8WCM5 200 aa13.86□□□□□ -0.19
ITGA6-204ENST00000412899 TGOLN2O43493 480 aa13.86□□□□□ -0.19
ITGA6-204ENST00000412899 VAMP1P23763 118 aa13.86□□□□□ -0.19
ITGA6-204ENST00000412899 CCR6P51684 374 aa13.86□□□□□ -0.19
ITGA6-204ENST00000412899 SUB1P53999 127 aaKnown RBP eCLIP13.86□□□□□ -0.19
ITGA6-204ENST00000412899 SRPXP78539 464 aa13.86□□□□□ -0.19
ITGA6-204ENST00000412899 TNFRSF9Q07011 255 aa13.86□□□□□ -0.19
ITGA6-204ENST00000412899 DEFB135Q30KP9 77 aa13.86□□□□□ -0.19
ITGA6-204ENST00000412899 OR52E5Q8NH55 327 aa13.86□□□□□ -0.19
ITGA6-204ENST00000412899 PINX1Q96BK5 328 aaKnown RBP13.86□□□□□ -0.19
ITGA6-204ENST00000412899 BSCL2Q96G97 398 aaPredicted RBP13.86□□□□□ -0.19
ITGA6-204ENST00000412899 ZNF436Q9C0F3 470 aaPredicted RBP13.86□□□□□ -0.19
ITGA6-204ENST00000412899 A0A0B4J2A0 478 aa13.85□□□□□ -0.19
ITGA6-204ENST00000412899 CENPXA8MT69 81 aa13.85□□□□□ -0.19
ITGA6-204ENST00000412899 I3L2K1 104 aa13.85□□□□□ -0.19
ITGA6-204ENST00000412899 UBE2CO00762 179 aa13.85□□□□□ -0.19
ITGA6-204ENST00000412899 MT-CO2P00403 227 aa13.85□□□□□ -0.19
ITGA6-204ENST00000412899 SULT1A3P0DMM9 295 aa13.85□□□□□ -0.19
ITGA6-204ENST00000412899 SULT1A4P0DMN0 295 aa13.85□□□□□ -0.19
ITGA6-204ENST00000412899 EWSR1Q01844 656 aaKnown RBP eCLIP13.85□□□□□ -0.19
ITGA6-204ENST00000412899 RBMS2Q15434 407 aaKnown RBP13.85□□□□□ -0.19
ITGA6-204ENST00000412899 AARDQ4LEZ3 155 aa13.85□□□□□ -0.19
ITGA6-204ENST00000412899 LAMTOR1Q6IAA8 161 aa13.85□□□□□ -0.19
ITGA6-204ENST00000412899 SPSB3Q6PJ21 355 aa13.85□□□□□ -0.19
ITGA6-204ENST00000412899 CEMP1Q6PRD7 247 aaPredicted RBP13.85□□□□□ -0.19
ITGA6-204ENST00000412899 LYZL2Q7Z4W2 148 aa13.85□□□□□ -0.19
ITGA6-204ENST00000412899 ATP6V0BQ99437 205 aa13.85□□□□□ -0.19
ITGA6-204ENST00000412899 SHPKQ9UHJ6 478 aa13.85□□□□□ -0.19
ITGA6-204ENST00000412899 TSPAN4O14817 238 aa13.84□□□□□ -0.19
ITGA6-204ENST00000412899 IGHV3-48P01763 117 aa13.84□□□□□ -0.19
ITGA6-204ENST00000412899 IL7P13232 177 aa13.84□□□□□ -0.19
ITGA6-204ENST00000412899 MFAP4P55083 255 aa13.84□□□□□ -0.19
ITGA6-204ENST00000412899 CENPSQ8N2Z9 138 aa13.84□□□□□ -0.19
ITGA6-204ENST00000412899 STPG3Q8N7X2 389 aa13.84□□□□□ -0.19
ITGA6-204ENST00000412899 TMEM190Q8WZ59 177 aa13.84□□□□□ -0.19
ITGA6-204ENST00000412899 CHRDL1Q9BU40 450 aa13.84□□□□□ -0.19
ITGA6-204ENST00000412899 DAZ1Q9NQZ3 744 aaKnown RBP13.84□□□□□ -0.19
ITGA6-204ENST00000412899 KLK5Q9Y337 293 aaPredicted RBP13.84□□□□□ -0.19
ITGA6-204ENST00000412899 PIGBOS1A0A0B4J2F0 54 aa13.83□□□□□ -0.2
ITGA6-204ENST00000412899 CEBPZOSA8MTT3 80 aa13.83□□□□□ -0.2
ITGA6-204ENST00000412899 F8W735 103 aaPredicted RBP13.83□□□□□ -0.2
ITGA6-204ENST00000412899 RNASE2P10153 161 aaKnown RBP13.83□□□□□ -0.2
ITGA6-204ENST00000412899 TXN2Q99757 166 aa13.83□□□□□ -0.2
ITGA6-204ENST00000412899 C20orf24Q9BUV8 137 aa13.83□□□□□ -0.2
ITGA6-204ENST00000412899 HEYLQ9NQ87 328 aaPredicted RBP13.83□□□□□ -0.2
ITGA6-204ENST00000412899 CACFD1Q9UGQ2 172 aa13.83□□□□□ -0.2
ITGA6-204ENST00000412899 KIR2DL5BA0A0G2JN68 375 aa13.82□□□□□ -0.2
ITGA6-204ENST00000412899 KIR2DL5BA0A0G2JPC4 375 aa13.82□□□□□ -0.2
ITGA6-204ENST00000412899 A6NHS1 94 aa13.82□□□□□ -0.2
ITGA6-204ENST00000412899 NUPL2O15504 423 aaKnown RBP13.82□□□□□ -0.2
ITGA6-204ENST00000412899 NXPH3O95157 252 aa13.82□□□□□ -0.2
ITGA6-204ENST00000412899 PPP1R1AQ13522 171 aa13.82□□□□□ -0.2
ITGA6-204ENST00000412899 SMCO1Q147U7 214 aa13.82□□□□□ -0.2
ITGA6-204ENST00000412899 CNPY1Q3B7I2 92 aa13.82□□□□□ -0.2
ITGA6-204ENST00000412899 NMSQ5H8A3 153 aa13.82□□□□□ -0.2
ITGA6-204ENST00000412899 KIR2DL5AQ8N109 375 aa13.82□□□□□ -0.2
ITGA6-204ENST00000412899 KIR2DL5BQ8NHK3 375 aa13.82□□□□□ -0.2
ITGA6-204ENST00000412899 RNF183Q96D59 192 aa13.82□□□□□ -0.2
ITGA6-204ENST00000412899 C7orf50Q9BRJ6 194 aaKnown RBP13.82□□□□□ -0.2
ITGA6-204ENST00000412899 OR4C46A6NHA9 309 aa13.81□□□□□ -0.2
ITGA6-204ENST00000412899 CORTO00230 105 aa13.81□□□□□ -0.2
ITGA6-204ENST00000412899 NDUFA4O00483 81 aa13.81□□□□□ -0.2
ITGA6-204ENST00000412899 NDUFB6O95139 128 aa13.81□□□□□ -0.2
ITGA6-204ENST00000412899 SFT2D2O95562 160 aa13.81□□□□□ -0.2
ITGA6-204ENST00000412899 CTSGP08311 255 aa13.81□□□□□ -0.2
ITGA6-204ENST00000412899 RPL35AP18077 110 aaKnown RBP13.81□□□□□ -0.2
ITGA6-204ENST00000412899 ADMP35318 185 aa13.81□□□□□ -0.2
ITGA6-204ENST00000412899 HTR2BP41595 481 aa13.81□□□□□ -0.2
ITGA6-204ENST00000412899 ODF3L2Q3SX64 289 aa13.81□□□□□ -0.2
ITGA6-204ENST00000412899 TMEM217Q8N7C4 229 aa13.81□□□□□ -0.2
ITGA6-204ENST00000412899 A0A1B0GU03 582 aa13.8□□□□□ -0.2
ITGA6-204ENST00000412899 GNG7O60262 68 aa13.8□□□□□ -0.2
ITGA6-204ENST00000412899 ATF4P18848 351 aaPredicted RBP13.8□□□□□ -0.2
ITGA6-204ENST00000412899 FCGR2BP31994 310 aaPredicted RBP13.8□□□□□ -0.2
ITGA6-204ENST00000412899 PVRIGQ6DKI7 326 aa13.8□□□□□ -0.2
ITGA6-204ENST00000412899 DUSP18Q8NEJ0 188 aa13.8□□□□□ -0.2
ITGA6-204ENST00000412899 OR1S1Q8NH92 325 aa13.8□□□□□ -0.2
ITGA6-204ENST00000412899 FLVCR2Q9UPI3 526 aa13.8□□□□□ -0.2
ITGA6-204ENST00000412899 IGHV3OR16-8A0A075B7F1 116 aa13.79□□□□□ -0.2
ITGA6-204ENST00000412899 DUXBA0A1W2PPF3 345 aa13.79□□□□□ -0.2
ITGA6-204ENST00000412899 ZNF207O43670 478 aaKnown RBP13.79□□□□□ -0.2
ITGA6-204ENST00000412899 OPRK1P41145 380 aa13.79□□□□□ -0.2
ITGA6-204ENST00000412899 NPBWR1P48145 328 aa13.79□□□□□ -0.2
ITGA6-204ENST00000412899 UBE2MP61081 183 aaKnown RBP13.79□□□□□ -0.2
ITGA6-204ENST00000412899 RELQ04864 619 aaPredicted RBP13.79□□□□□ -0.2
ITGA6-204ENST00000412899 BSXQ3C1V8 233 aa13.79□□□□□ -0.2
ITGA6-204ENST00000412899 LINC00299Q6ZSB3 139 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms