RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 SPANXN5Q5MJ07 72 aa7.91□□□□□ -1.14
LINC01643-201ENST00000412218 AKR1C8PQ5T2L2 129 aa7.91□□□□□ -1.14
LINC01643-201ENST00000412218 TMEM182Q6ZP80 229 aaPredicted RBP7.91□□□□□ -1.14
LINC01643-201ENST00000412218 OR5AN1Q8NGI8 311 aa7.91□□□□□ -1.14
LINC01643-201ENST00000412218 OR4A16Q8NH70 328 aa7.91□□□□□ -1.14
LINC01643-201ENST00000412218 DTD1Q8TEA8 209 aa7.91□□□□□ -1.14
LINC01643-201ENST00000412218 PINX1Q96BK5 328 aaKnown RBP7.91□□□□□ -1.14
LINC01643-201ENST00000412218 PSMG3Q9BT73 122 aaPredicted RBP7.91□□□□□ -1.14
LINC01643-201ENST00000412218 PBDC1Q9BVG4 233 aa7.91□□□□□ -1.14
LINC01643-201ENST00000412218 SH3BGRL3Q9H299 93 aa7.91□□□□□ -1.14
LINC01643-201ENST00000412218 TREM1Q9NP99 234 aa7.91□□□□□ -1.14
LINC01643-201ENST00000412218 WASHC3Q9Y3C0 194 aa7.91□□□□□ -1.14
LINC01643-201ENST00000412218 CEBPZOSA8MTT3 80 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 RRHO14718 337 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 PROP1O75360 226 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 HRASP01112 189 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 HBE1P02100 147 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 APOA2P02652 100 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 METTL15P1P0C7V9 234 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 CRIP2P52943 208 aaPredicted RBP7.9□□□□□ -1.14
LINC01643-201ENST00000412218 SPCS3P61009 180 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 SLC38A11Q08AI6 406 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 KIAA0141Q14154 515 aaPredicted RBP7.9□□□□□ -1.14
LINC01643-201ENST00000412218 POU2AF1Q16633 256 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 FAM213BQ8TBF2 198 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 UBE2E2Q96LR5 201 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 TMEM147Q9BVK8 224 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 KLK15Q9H2R5 256 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 FBXL15Q9H469 300 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 GNB4Q9HAV0 340 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 PLA2G2EQ9NZK7 142 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 FBXO7Q9Y3I1 522 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 TIMM9Q9Y5J7 89 aa7.9□□□□□ -1.14
LINC01643-201ENST00000412218 A0A1B0GW64 132 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 H7C2Y5 167 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 IFNA17P01571 189 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 APOC3P02656 99 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 IGKV1-16P04430 117 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 OR9G9P0C7N8 305 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 CX3CL1P78423 397 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 SERF2P84101 59 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 RUNX1Q01196 453 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 PEA15Q15121 130 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 PLGLAQ15195 96 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 ECSCRQ19T08 205 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 ZNF429Q86V71 674 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 PDPNQ86YL7 162 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 PUSL1Q8N0Z8 303 aaKnown RBP7.89□□□□□ -1.15
LINC01643-201ENST00000412218 SVBPQ8N300 66 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 ZNF491Q8N8L2 437 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 ZNF383Q8NA42 475 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 OR10P1Q8NGE3 313 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 RNF5Q99942 180 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 SEC11CQ9BY50 192 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 HIPK2Q9H2X6 1198 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 SLC35D1Q9NTN3 355 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 TMEM140Q9NV12 185 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 UQCC1Q9NVA1 299 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 FOXA2Q9Y261 457 aaPredicted RBP7.89□□□□□ -1.15
LINC01643-201ENST00000412218 CARHSP1Q9Y2V2 147 aaKnown RBP7.89□□□□□ -1.15
LINC01643-201ENST00000412218 TGP01266 2768 aa7.89□□□□□ -1.15
LINC01643-201ENST00000412218 A0A1W2PN81 502 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 C15orf61A6NNL5 157 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 F8W036 122 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 FCN1O00602 326 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 SOX15O60248 233 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 EGR2P11161 476 aaPredicted RBP7.88□□□□□ -1.15
LINC01643-201ENST00000412218 CHRNA7P36544 502 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 SNCAP37840 140 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 RAB9AP51151 201 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 LINC00205P59089 165 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 GNB1P62873 340 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 PSG5Q15238 335 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 C10orf91Q5T1B1 145 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 C9orf66Q5T8R8 295 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 ASPHD1Q5U4P2 390 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 OR11H1Q8NG94 326 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 SUN5Q8TC36 379 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 OR4C12Q96R67 309 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 QTRT1Q9BXR0 403 aaKnown RBP7.88□□□□□ -1.15
LINC01643-201ENST00000412218 WDR61Q9GZS3 305 aaKnown RBP7.88□□□□□ -1.15
LINC01643-201ENST00000412218 SMDT1Q9H4I9 107 aa7.88□□□□□ -1.15
LINC01643-201ENST00000412218 METTL1Q9UBP6 276 aaKnown RBP7.88□□□□□ -1.15
LINC01643-201ENST00000412218 ZMAT5Q9UDW3 170 aaKnown RBP7.88□□□□□ -1.15
LINC01643-201ENST00000412218 UBE2L5PA0A1B0GUS4 154 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 SEC14L6B5MCN3 397 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 CA2P00918 260 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 CD5P06127 495 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 H2AFB1P0C5Y9 115 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 HOXA1P49639 335 aaPredicted RBP7.87□□□□□ -1.15
LINC01643-201ENST00000412218 OR2B8PP59922 312 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 RAB11AP62491 216 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 DEFA5Q01523 94 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 ARL16Q0P5N6 197 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 DEFB121Q5J5C9 76 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 OR8G2PQ6IF36 304 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 SSX9Q7RTT3 188 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 HAPLN4Q86UW8 402 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 OR1N2Q8NGR9 330 aa7.87□□□□□ -1.15
LINC01643-201ENST00000412218 OSR1Q8TAX0 266 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms