RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 NANOS3P60323 173 aaKnown RBP3.84□□□□□ -1.79
PTPN13-202ENST00000411767 CXCL6P80162 114 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 ZNF252P-AS1Q0IIN9 211 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 SRSF7Q16629 238 aaKnown RBP eCLIP3.84□□□□□ -1.79
PTPN13-202ENST00000411767 GFI1BQ5VTD9 330 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 SPATA31B1PQ5VZV4 182 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 XAF1Q6GPH4 301 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 Q9H3A6 140 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 DCCP43146 1447 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 EFEMP2O95967 443 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 FOXC1Q12948 553 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 TGIF1Q15583 401 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 PRR30Q53SZ7 412 aaPredicted RBP3.84□□□□□ -1.79
PTPN13-202ENST00000411767 DEFB105AQ8NG35 78 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 A0A0U1RQV5 110 aa3.84□□□□□ -1.8
PTPN13-202ENST00000411767 PRSS29PA6NIE9 313 aa3.84□□□□□ -1.8
PTPN13-202ENST00000411767 FGF16O43320 207 aa3.84□□□□□ -1.8
PTPN13-202ENST00000411767 LTBRP36941 435 aa3.84□□□□□ -1.8
PTPN13-202ENST00000411767 SRSF2Q01130 221 aaKnown RBP3.84□□□□□ -1.8
PTPN13-202ENST00000411767 PMAIP1Q13794 54 aa3.84□□□□□ -1.8
PTPN13-202ENST00000411767 VWC2Q2TAL6 325 aa3.84□□□□□ -1.8
PTPN13-202ENST00000411767 PYY3Q5JQD4 70 aa3.84□□□□□ -1.8
PTPN13-202ENST00000411767 AKAP12Q02952 1782 aa3.84□□□□□ -1.8
PTPN13-202ENST00000411767 TRGV1A0A0A0MS02 117 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 H0YL77 283 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 APOC4P55056 127 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 NSUN5P1Q3KNT7 163 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 FBLN5Q9UBX5 448 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 UBR1Q8IWV7 1749 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 MON2Q7Z3U7 1717 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 A0A0U1RQF3 1178 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 A0A1W2PQD3 144 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 ADM5C9JUS6 153 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 FGF6P10767 208 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 ATP5EP2Q5VTU8 51 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 FBXL7Q9UJT9 491 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 IGHV3-15A0A0B4J1V0 119 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 IGHV5-51A0A0C4DH38 117 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 PSG4Q00888 419 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 GUSBP1Q15486 140 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 LY6EQ16553 131 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 FHL5Q5TD97 284 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 C8orf49Q96NF6 230 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 FAM110AQ9BQ89 295 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 AJAP1Q9UKB5 411 aaPredicted RBP3.83□□□□□ -1.8
PTPN13-202ENST00000411767 LSM4Q9Y4Z0 139 aaKnown RBP3.83□□□□□ -1.8
PTPN13-202ENST00000411767 ATP5J2P56134 94 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 HIST2H2BCQ6DN03 193 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 HIST2H2BDQ6DRA6 164 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 SRSF8Q9BRL6 282 aaKnown RBP3.83□□□□□ -1.8
PTPN13-202ENST00000411767 PRO1854Q9UHT4 67 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 PXDNQ92626 1479 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 HIST1H2BKO60814 126 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 HIST1H2BJP06899 126 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 AZU1P20160 251 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 ASPHD1Q5U4P2 390 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 Q6ZWC4 215 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 FGFRL1Q8N441 504 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 CD177Q8N6Q3 437 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 C9orf118A6NHY6 69 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 PRB3Q04118 309 aaPredicted RBP3.83□□□□□ -1.8
PTPN13-202ENST00000411767 MORN5Q5VZ52 161 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 FAM166AQ6J272 317 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 CD163L1Q9NR16 1453 aa3.83□□□□□ -1.8
PTPN13-202ENST00000411767 MAP2P11137 1827 aaKnown RBP3.83□□□□□ -1.8
PTPN13-202ENST00000411767 MST1RQ04912 1400 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 MDKP21741 143 aaPredicted RBP3.82□□□□□ -1.8
PTPN13-202ENST00000411767 FGF9P31371 208 aaPredicted RBP3.82□□□□□ -1.8
PTPN13-202ENST00000411767 ZNF79Q15937 498 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 C1orf220Q5T0J3 134 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 C1orf210Q8IVY1 113 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 ZNF784Q8NCA9 323 aaPredicted RBP3.82□□□□□ -1.8
PTPN13-202ENST00000411767 MCRIP2Q9BUT9 160 aaKnown RBP3.82□□□□□ -1.8
PTPN13-202ENST00000411767 DLL3Q9NYJ7 618 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 C1orf167Q5SNV9 1468 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 E9PLD3 99 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 COX5BP10606 129 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 MRM2Q9UI43 246 aaKnown RBP3.82□□□□□ -1.8
PTPN13-202ENST00000411767 A0A1B0GVG6 124 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 TEX38Q6PEX7 206 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 SH2D6Q7Z4S9 175 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 TRAV26-2A0A0B4J265 109 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 G3V4G9 280 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 COX6A1P12074 109 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 CCL5P13501 91 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 Q6ZUT4 128 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 OPRPNQ99935 248 aaPredicted RBP3.82□□□□□ -1.8
PTPN13-202ENST00000411767 MRPS18BQ9Y676 258 aaKnown RBP3.82□□□□□ -1.8
PTPN13-202ENST00000411767 K7EP34 96 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 SERF1AO75920 110 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 C1QTNF5Q9BXJ0 243 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 COL3A1P02461 1466 aaPredicted RBP3.82□□□□□ -1.8
PTPN13-202ENST00000411767 IGHV4-28A0A0C4DH34 117 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 FAM236AA0A1B0GUQ0 79 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 FAM236BA0A1B0GV22 79 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 CCL21O00585 134 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 FOXF1Q12946 379 aa3.82□□□□□ -1.8
PTPN13-202ENST00000411767 ELNP15502 786 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 RPL15P61313 204 aaKnown RBP3.81□□□□□ -1.8
PTPN13-202ENST00000411767 TM2D2Q9BX73 214 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms