RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 PROSCO94903 275 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 TCL1BO95988 128 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 IGLV3-1P01715 115 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 TYMSP04818 313 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 MARCKSL1P49006 195 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 DEFB113Q30KQ7 82 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 COQ5Q5HYK3 327 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 SPINK6Q6UWN8 80 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 FUNDC1Q8IVP5 155 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 OR13C4Q8NGS5 318 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 TERB2Q8NHR7 220 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 TMEM14CQ9P0S9 112 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 MUC2Q02817 5179 aa-0.39□□□□□ -2.47
RNU4-55P-201ENST00000410731 M0R378 163 aa-0.4□□□□□ -2.47
RNU4-55P-201ENST00000410731 RPL12P30050 165 aaKnown RBP-0.4□□□□□ -2.47
RNU4-55P-201ENST00000410731 Q6ZS49 121 aa-0.4□□□□□ -2.47
RNU4-55P-201ENST00000410731 SYCE1Q8N0S2 351 aa-0.4□□□□□ -2.47
RNU4-55P-201ENST00000410731 DNAJB3Q8WWF6 145 aa-0.4□□□□□ -2.47
RNU4-55P-201ENST00000410731 CITO14578 2027 aa-0.4□□□□□ -2.47
RNU4-55P-201ENST00000410731 ASXL3Q9C0F0 2248 aa-0.41□□□□□ -2.47
RNU4-55P-201ENST00000410731 A0A1B0GV50 99 aa-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 PQLC2LA1A4F0 135 aa-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 PFDN6O15212 129 aa-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 KLF7O75840 302 aaPredicted RBP-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 HOXA6P31267 233 aa-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 FAM74A1Q5RGS3 127 aa-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 C1orf195Q5TG92 126 aa-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 LRRC25Q8N386 305 aaPredicted RBP-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 SIGLECL1Q8N7X8 197 aa-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 PLPP5Q8NEB5 264 aa-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 MRPL30Q8TCC3 161 aaKnown RBP-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 FAM103A1Q9BTL3 118 aaKnown RBP-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 TP73-AS1Q9UF72 201 aa-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 FAM208BQ5VWN6 2430 aa-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 ABCA2Q9BZC7 2435 aa-0.41□□□□□ -2.48
RNU4-55P-201ENST00000410731 STAB1Q9NY15 2570 aa-0.42□□□□□ -2.48
RNU4-55P-201ENST00000410731 TRBV6-4A0A1B0GX49 114 aa-0.42□□□□□ -2.48
RNU4-55P-201ENST00000410731 TLCD2A6NGC4 264 aa-0.42□□□□□ -2.48
RNU4-55P-201ENST00000410731 EVPLLA8MZ36 301 aa-0.42□□□□□ -2.48
RNU4-55P-201ENST00000410731 CCL16O15467 120 aa-0.42□□□□□ -2.48
RNU4-55P-201ENST00000410731 C8orf88P0DMB2 117 aa-0.42□□□□□ -2.48
RNU4-55P-201ENST00000410731 UCHL3P15374 230 aa-0.42□□□□□ -2.48
RNU4-55P-201ENST00000410731 CLECL1Q8IZS7 167 aa-0.42□□□□□ -2.48
RNU4-55P-201ENST00000410731 DNAJC9Q8WXX5 260 aa-0.42□□□□□ -2.48
RNU4-55P-201ENST00000410731 CMTM5Q96DZ9 223 aa-0.42□□□□□ -2.48
RNU4-55P-201ENST00000410731 IMP4Q96G21 291 aaKnown RBP-0.42□□□□□ -2.48
RNU4-55P-201ENST00000410731 C3orf18Q9UK00 162 aa-0.42□□□□□ -2.48
RNU4-55P-201ENST00000410731 UNC79Q9P2D8 2635 aa-0.42□□□□□ -2.48
RNU4-55P-201ENST00000410731 WNK2Q9Y3S1 2297 aa-0.43□□□□□ -2.48
RNU4-55P-201ENST00000410731 OCMP0CE72 109 aaPredicted RBP-0.43□□□□□ -2.48
RNU4-55P-201ENST00000410731 MYL12AP19105 171 aa-0.43□□□□□ -2.48
RNU4-55P-201ENST00000410731 PSMB6P28072 239 aa-0.43□□□□□ -2.48
RNU4-55P-201ENST00000410731 HBA1P69905 142 aa-0.43□□□□□ -2.48
RNU4-55P-201ENST00000410731 CLVS2Q5SYC1 327 aa-0.43□□□□□ -2.48
RNU4-55P-201ENST00000410731 CLEC6AQ6EIG7 209 aa-0.43□□□□□ -2.48
RNU4-55P-201ENST00000410731 CHMP4BQ9H444 224 aaKnown RBP-0.43□□□□□ -2.48
RNU4-55P-201ENST00000410731 PLEKHJ1Q9NW61 149 aa-0.43□□□□□ -2.48
RNU4-55P-201ENST00000410731 NHP2Q9NX24 153 aaKnown RBP-0.43□□□□□ -2.48
RNU4-55P-201ENST00000410731 SLC35A3Q9Y2D2 325 aa-0.43□□□□□ -2.48
RNU4-55P-201ENST00000410731 KIAA1549Q9HCM3 1950 aa-0.43□□□□□ -2.48
RNU4-55P-201ENST00000410731 GOLGA8KD6RF30 607 aa-0.44□□□□□ -2.48
RNU4-55P-201ENST00000410731 NUPR1O60356 82 aa-0.44□□□□□ -2.48
RNU4-55P-201ENST00000410731 NAA20P61599 178 aa-0.44□□□□□ -2.48
RNU4-55P-201ENST00000410731 Q6ZS92 163 aa-0.44□□□□□ -2.48
RNU4-55P-201ENST00000410731 HIST3H2BBQ8N257 126 aa-0.44□□□□□ -2.48
RNU4-55P-201ENST00000410731 OR13D1Q8NGV5 346 aa-0.44□□□□□ -2.48
RNU4-55P-201ENST00000410731 C7orf50Q9BRJ6 194 aaKnown RBP-0.44□□□□□ -2.48
RNU4-55P-201ENST00000410731 ZDBF2Q9HCK1 2354 aa-0.44□□□□□ -2.48
RNU4-55P-201ENST00000410731 LRP2P98164 4655 aa-0.44□□□□□ -2.48
RNU4-55P-201ENST00000410731 ABCC11Q96J66 1382 aa-0.45□□□□□ -2.48
RNU4-55P-201ENST00000410731 PIK3R4Q99570 1358 aa-0.45□□□□□ -2.48
RNU4-55P-201ENST00000410731 MUC4Q99102 2169 aa-0.45□□□□□ -2.48
RNU4-55P-201ENST00000410731 TRAV3A0A0B4J244 114 aa-0.45□□□□□ -2.48
RNU4-55P-201ENST00000410731 HSBP1L1C9JCN9 74 aa-0.45□□□□□ -2.48
RNU4-55P-201ENST00000410731 KDELR1P24390 212 aa-0.45□□□□□ -2.48
RNU4-55P-201ENST00000410731 ATOH7Q8N100 152 aa-0.45□□□□□ -2.48
RNU4-55P-201ENST00000410731 KLK6Q92876 244 aa-0.45□□□□□ -2.48
RNU4-55P-201ENST00000410731 XPNPEP1Q9NQW7 623 aa-0.45□□□□□ -2.48
RNU4-55P-201ENST00000410731 SLC39A9Q9NUM3 307 aa-0.45□□□□□ -2.48
RNU4-55P-201ENST00000410731 JPT1Q9UK76 154 aa-0.45□□□□□ -2.48
RNU4-55P-201ENST00000410731 EPDR1Q9UM22 224 aa-0.45□□□□□ -2.48
RNU4-55P-201ENST00000410731 KIF13BQ9NQT8 1826 aa-0.45□□□□□ -2.48
RNU4-55P-201ENST00000410731 ABCA12Q86UK0 2595 aa-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 HSPG2P98160 4391 aa-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 IGHV1-58A0A0C4DH39 117 aa-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 ERICH2A1L162 156 aa-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 BUB1B-PAK6H3BSN5 160 aa-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 ZNF137PP52743 207 aa-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 FOXA3P55318 350 aaPredicted RBP-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 MLLT11Q13015 90 aaPredicted RBP-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 SFXN4Q6P4A7 337 aa-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 TEX47Q8TBZ9 253 aa-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 H1FXQ92522 213 aaKnown RBP-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 GPR146Q96CH1 333 aa-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 DCSTAMPQ9H295 470 aa-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 IMP3Q9NV31 184 aaKnown RBP-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 ERGIC3Q9Y282 383 aa-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 CACNA1AO00555 2505 aa-0.46□□□□□ -2.48
RNU4-55P-201ENST00000410731 CXCR6O00574 342 aa-0.47□□□□□ -2.48
RNU4-55P-201ENST00000410731 IFNA10P01566 189 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms