RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PCP4P48539 62 aa9.46□□□□□ -0.9
PRPF40A-202ENST00000410080 P2RY4P51582 365 aa9.46□□□□□ -0.9
PRPF40A-202ENST00000410080 PILRAQ9UKJ1 303 aa9.46□□□□□ -0.9
PRPF40A-202ENST00000410080 MT-ND6P03923 174 aa9.46□□□□□ -0.9
PRPF40A-202ENST00000410080 FAM110DQ8TAY7 271 aaPredicted RBP9.46□□□□□ -0.9
PRPF40A-202ENST00000410080 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.46□□□□□ -0.9
PRPF40A-202ENST00000410080 NBR2O15453 112 aa9.46□□□□□ -0.9
PRPF40A-202ENST00000410080 TMEM50AO95807 157 aa9.46□□□□□ -0.9
PRPF40A-202ENST00000410080 VMO1Q7Z5L0 202 aa9.46□□□□□ -0.9
PRPF40A-202ENST00000410080 ST6GALNAC6Q969X2 333 aa9.46□□□□□ -0.9
PRPF40A-202ENST00000410080 ROS1P08922 2347 aa9.46□□□□□ -0.9
PRPF40A-202ENST00000410080 GGTLC3B5MD39 225 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 NAPSAO96009 420 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 LHFPL4Q7Z7J7 247 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 MIXL1Q9H2W2 232 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 SIPA1L1O43166 1804 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 HBDP02042 147 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 PLXNA3P51805 1871 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 ANXA2RQ3ZCQ2 193 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 TMEM252Q8N6L7 170 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 RCHY1Q96PM5 261 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 UQCR10Q9UDW1 63 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 CBLN1P23435 193 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 TCF23Q7RTU1 214 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 HAPLN4Q86UW8 402 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 TRAV8-2A0A0B4J237 113 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 HCFC1P51610 2035 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 A0A1W2PPC1 479 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 SDHCQ99643 169 aaPredicted RBP9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 C19orf24Q9BVV8 132 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 WDR90Q96KV7 1748 aa9.45□□□□□ -0.9
PRPF40A-202ENST00000410080 C17orf100A8MU93 164 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 CA1P00915 261 aaPredicted RBP9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 PAX8Q06710 450 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 PMCHL2Q9BQD1 86 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 NGFRP08138 427 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 HIST1H4AP62805 103 aaKnown RBP9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 EGR4Q05215 589 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 SRSF6Q13247 344 aaKnown RBP9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 COQ2Q96H96 371 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 LRRC37AA6NMS7 1700 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 CD300CQ08708 224 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 MAPK1IP1LQ8NDC0 245 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 PRSS23O95084 383 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 GCHFRP30047 84 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 AMELYQ99218 206 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 SIRT4Q9Y6E7 314 aaPredicted RBP9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 PAX4O43316 350 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 WFDC6Q9BQY6 131 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 TXNDC17Q9BRA2 123 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 ZMAT4Q9H898 229 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 PLXNA2O75051 1894 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 CCL3L1P16619 93 aa9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 CMC4P56277 68 aaPredicted RBP9.44□□□□□ -0.9
PRPF40A-202ENST00000410080 ZSWIM8A7E2V4 1837 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 A0A1B0GUT8 65 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 DUSP14O95147 198 aaKnown RBP9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 CFHR3Q02985 330 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 TBR1Q16650 682 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 SCO2A0A1W2PP80 73 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 TFF3Q07654 80 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 TMEM30BQ3MIR4 351 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 TMEM91Q6ZNR0 172 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 SAXO1Q8IYX7 474 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 DLX4Q92988 240 aaPredicted RBP9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 ZNF48Q96MX3 618 aaPredicted RBP9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 TRAF4Q9BUZ4 470 aaPredicted RBP9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 ELF5Q9UKW6 265 aaPredicted RBP9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 SPCS1Q9Y6A9 102 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 CXorf65A6NEN9 183 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 DTX1Q86Y01 620 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 C9orf106Q8NAJ2 232 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 OR52E5Q8NH55 327 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 C14orf144Q96I85 54 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 VKORC1Q9BQB6 163 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 NPCDR1Q9BY65 106 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 KLRD1Q13241 179 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 VAX1Q5SQQ9 334 aa9.43□□□□□ -0.9
PRPF40A-202ENST00000410080 PLXNB1O43157 2135 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 TOMM40O96008 361 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 GNG5P63218 68 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 DSCAML1Q8TD84 2053 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 A0A1B0GWB2 263 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 LINC00614P0C842 121 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 FUT5Q11128 374 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 CFHR5Q9BXR6 569 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 ZNF257Q9Y2Q1 563 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 DSCR9P59020 149 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 BRD3OSQ6XYD6 125 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 PLXNA4Q9HCM2 1894 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 KBTBD11-OT1A0A1B0GTJ5 212 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 TFF1P04155 84 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 UNQ6494/PRO21346Q6UXR6 183 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 FAM206AQ9NX38 181 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 TRGV11A0A075B6L2 103 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 SLC17A3O00476 420 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 GATA2P23769 480 aaPredicted RBP9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 NEUROG1Q92886 237 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 HIST1H2BAQ96A08 127 aa9.42□□□□□ -0.9
PRPF40A-202ENST00000410080 HIGD1CA8MV81 97 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms