RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 BAALC-AS2P0C853 105 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 MGST1P10620 155 aaKnown RBP0.14□□□□□ -2.39
PMS1-203ENST00000409593 TCL1AP56279 114 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 SRSF6Q13247 344 aaKnown RBP0.14□□□□□ -2.39
PMS1-203ENST00000409593 PTH2Q96A98 100 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 IMP4Q96G21 291 aaKnown RBP0.14□□□□□ -2.39
PMS1-203ENST00000409593 C11orf68Q9H3H3 251 aaKnown RBP0.14□□□□□ -2.39
PMS1-203ENST00000409593 RASL12Q9NYN1 266 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 WRNQ14191 1432 aaPredicted RBP eCLIP0.14□□□□□ -2.39
PMS1-203ENST00000409593 PIK3R4Q99570 1358 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 MAP3K5Q99683 1374 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 A0A1B0GV50 99 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 PQLC2LA1A4F0 135 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 FAAHO00519 579 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 SLC16A4O15374 487 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 TGOLN2O43493 480 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 APOEP02649 317 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 OR5G3P0C626 314 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 OCM2P0CE71 109 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 RPS20P60866 119 aaKnown RBP0.13□□□□□ -2.39
PMS1-203ENST00000409593 CDC42P60953 191 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 HBA1P69905 142 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 MPV17LQ2QL34 196 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 CDKL4Q5MAI5 379 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 LRRC25Q8N386 305 aaPredicted RBP0.13□□□□□ -2.39
PMS1-203ENST00000409593 OR13C4Q8NGS5 318 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 H1FXQ92522 213 aaKnown RBP0.13□□□□□ -2.39
PMS1-203ENST00000409593 PPP1R2P1Q96PQ5 205 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 FGFR1OP2Q9NVK5 253 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 FBXL12Q9NXK8 326 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 PKIGQ9Y2B9 76 aa0.13□□□□□ -2.39
PMS1-203ENST00000409593 RIC1Q4ADV7 1423 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 C9orf84Q5VXU9 1444 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 MUC2Q02817 5179 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 OR2J2O76002 312 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 ISG15P05161 165 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 HIST1H1TP22492 207 aaPredicted RBP0.12□□□□□ -2.39
PMS1-203ENST00000409593 RPL5P46777 297 aaKnown RBP0.12□□□□□ -2.39
PMS1-203ENST00000409593 DEFA1P59665 94 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 SNRPD2P62316 118 aaKnown RBP0.12□□□□□ -2.39
PMS1-203ENST00000409593 DEFB113Q30KQ7 82 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 OGFRL1Q5TC84 451 aaPredicted RBP0.12□□□□□ -2.39
PMS1-203ENST00000409593 SOSTDC1Q6X4U4 206 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 MIR17HGQ75NE6 70 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 SIGLECL1Q8N7X8 197 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 NIPSNAP1Q9BPW8 284 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 NIT2Q9NQR4 276 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 ROBO3Q96MS0 1386 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 SNAPC4Q5SXM2 1469 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 E9PCH4 1651 aa0.12□□□□□ -2.39
PMS1-203ENST00000409593 DPRXA6NFQ7 191 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 CCDC160A6NGH7 325 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 HLA-DRB1P01911 266 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 HIST1H1EP10412 219 aaKnown RBP0.11□□□□□ -2.39
PMS1-203ENST00000409593 COX6A1P12074 109 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 EFNA4P52798 201 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 AP2S1P53680 142 aaPredicted RBP0.11□□□□□ -2.39
PMS1-203ENST00000409593 OR2F1Q13607 317 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 SPRNQ5BIV9 151 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 GKN2Q86XP6 184 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 TSPAN32Q96QS1 320 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 PARD6GQ9BYG4 376 aaPredicted RBP0.11□□□□□ -2.39
PMS1-203ENST00000409593 DRC3Q9H069 523 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 MIXL1Q9H2W2 232 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 USE1Q9NZ43 259 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 MRPL27Q9P0M9 148 aaKnown RBP0.11□□□□□ -2.39
PMS1-203ENST00000409593 DOCK3Q8IZD9 2030 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.11□□□□□ -2.39
PMS1-203ENST00000409593 TRAV12-1A0A0B4J245 112 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 EXOC1LA0A1B0GW35 172 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 CHP2O43745 196 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 DNAL4O96015 105 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 C1orf137Q5JT78 98 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 C8orf74Q6P047 294 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 OR10J5Q8NHC4 309 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 TOMM6Q96B49 74 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 NEO1Q92859 1461 aa0.11□□□□□ -2.39
PMS1-203ENST00000409593 KIF13BQ9NQT8 1826 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 TRAV3A0A0B4J244 114 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 FAM236DA0A1B0GTK5 79 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 DCTN3O75935 186 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 TCL1BO95988 128 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 IFNA5P01569 189 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 CALB1P05937 261 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 FAM236CP0DP71 79 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 SPCS3P61009 180 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 LINC01554Q52M75 96 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 C12orf45Q8N5I9 185 aaPredicted RBP0.1□□□□□ -2.39
PMS1-203ENST00000409593 DDI1Q8WTU0 396 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 GUCA1BQ9UMX6 200 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 ERGIC3Q9Y282 383 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 NUP155O75694 1391 aa0.1□□□□□ -2.39
PMS1-203ENST00000409593 TRAV9-1A0A075B6T8 112 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 ZNF736B4DX44 427 aaPredicted RBP0.09□□□□□ -2.39
PMS1-203ENST00000409593 CETN3O15182 167 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 PROSCO94903 275 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 KRTAP2-3P0C7H8 128 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 NKX2-5P52952 324 aaPredicted RBP0.09□□□□□ -2.39
PMS1-203ENST00000409593 COTL1Q14019 142 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 HIST3H3Q16695 136 aa0.09□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms