RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 INTS1Q8N201 2190 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 A0A0G2JRQ6 117 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 C15orf65H3BRN8 121 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 NDUFS8O00217 210 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 AMY1AP04745 511 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 GNLYP22749 145 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 GAMTQ14353 236 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 PRR30Q53SZ7 412 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 ATRAIDQ6UW56 229 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 Q6ZRM9 215 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 C8orf31Q8N9H6 132 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 TMEM191AQ9H0A3 160 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 LIME1Q9H400 295 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 OTORQ9NRC9 128 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 IL36BQ9NZH7 164 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 PTPRQQ9UMZ3 2332 aa3.89□□□□□ -1.79
PCDH11X-207ENST00000406881 SH2D7A6NKC9 451 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 C15orf62A8K5M9 175 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 BUB1B-PAK6H3BSN5 160 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 TRGV3P03979 118 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 PLA2G5P39877 138 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 DYNLRB2Q8TF09 96 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 FMC1Q96HJ9 113 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 TRGV9Q99603 122 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 SLC25A33Q9BSK2 321 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 TMEM242Q9NWH2 141 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 CRIM1Q9NZV1 1036 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 TGIF2-C20orf24A0A0A6YYL0 155 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 M0R2Z0 102 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 GGCTO75223 188 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 GCGP01275 180 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 RPLP1P05386 114 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 ATP5G3P48201 142 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 RPL23P62829 140 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 ELOBQ15370 118 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 POU2AF1Q16633 256 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 EBLN2Q6P2I7 272 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 C5orf24Q7Z6I8 188 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 C11orf53Q8IXP5 236 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 OR4B1Q8NGF8 309 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 HSPB8Q9UJY1 196 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 ZNF462Q96JM2 2506 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 NBASA2RRP1 2371 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 FER1L5A0AVI2 2057 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 HEATR1Q9H583 2144 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 A0A1B0GW15 77 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 H0Y8G0 127 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 COL8A2P25067 703 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 CDX1P47902 265 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 LY6EQ16553 131 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 C17orf58Q2M2W7 97 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 Q6AWC8 147 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 LYPD2Q6UXB3 125 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 ZNF833PQ6ZTB9 187 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 GOLT1AQ6ZVE7 132 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 VMO1Q7Z5L0 202 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 ZNF738Q8NE65 137 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 IMMP2LQ96T52 175 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 MRPL18Q9H0U6 180 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 OSTCQ9NRP0 149 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 NAGKQ9UJ70 344 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 SCO2A0A1W2PP80 73 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 IGHV3-48P01763 117 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 HLA-DRB1P01911 266 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 C5orf64Q2M2E5 130 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 ZNF343Q6P1L6 599 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 RPP25LQ8N5L8 163 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 OR5AN1Q8NGI8 311 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 C8orf46Q8TAG6 207 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 SLC50A1Q9BRV3 221 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 SIGLEC9Q9Y336 463 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 LY96Q9Y6Y9 160 aa3.88□□□□□ -1.79
PCDH11X-207ENST00000406881 A0A1B0GWJ7 208 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 RNASE2P10153 161 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 SLC25A16P16260 332 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 LOXP28300 417 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 TSPOP30536 169 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 RBPMS2Q6ZRY4 209 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 NEUROG1Q92886 237 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 RNF125Q96EQ8 232 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 AGMATQ9BSE5 352 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 FGF23Q9GZV9 251 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 TMEM14BQ9NUH8 114 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 MOB4Q9Y3A3 225 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 F11RQ9Y624 299 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 PKD1L2Q7Z442 2459 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 TRAV3A0A0B4J244 114 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 B4DSR2 109 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 ZNF137PP52743 207 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 PAX9P55771 341 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 SRSF3P84103 164 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 TM4SF20Q53R12 229 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 CIARTQ8N365 385 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 MGST2Q99735 147 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 ATG101Q9BSB4 218 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 MAP1LC3CQ9BXW4 147 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 GPR61Q9BZJ8 451 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 LOC102724200A0A096LPH7 203 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 C1QTNF9BB2RNN3 333 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 1165.6 ms