RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 LRRC20Q8TCA0 184 aa13.27□□□□□ -0.28
IRF1-202ENST00000405885 CACNG8Q8WXS5 425 aa13.27□□□□□ -0.28
IRF1-202ENST00000405885 TIMM9Q9Y5J7 89 aa13.27□□□□□ -0.28
IRF1-202ENST00000405885 BAHCC1Q9P281 2608 aa13.27□□□□□ -0.28
IRF1-202ENST00000405885 NPIPB5A8MRT5 1133 aa13.27□□□□□ -0.29
IRF1-202ENST00000405885 I3L2K1 104 aa13.27□□□□□ -0.29
IRF1-202ENST00000405885 HOXA3O43365 443 aaPredicted RBP13.27□□□□□ -0.29
IRF1-202ENST00000405885 SERF2P84101 59 aa13.27□□□□□ -0.29
IRF1-202ENST00000405885 ZNF90Q03938 601 aa13.27□□□□□ -0.29
IRF1-202ENST00000405885 AANATQ16613 207 aa13.27□□□□□ -0.29
IRF1-202ENST00000405885 UNQ5815/PRO19632Q6UWF5 114 aa13.27□□□□□ -0.29
IRF1-202ENST00000405885 Q6YL49 198 aa13.27□□□□□ -0.29
IRF1-202ENST00000405885 TTC9CQ8N5M4 171 aa13.27□□□□□ -0.29
IRF1-202ENST00000405885 SLC35E1Q96K37 410 aa13.27□□□□□ -0.29
IRF1-202ENST00000405885 YAE1D1Q9NRH1 226 aa13.27□□□□□ -0.29
IRF1-202ENST00000405885 PXMP4Q9Y6I8 212 aa13.27□□□□□ -0.29
IRF1-202ENST00000405885 IGKV1D-37A0A075B6S9 117 aa13.26□□□□□ -0.29
IRF1-202ENST00000405885 TRIM77I1YAP6 450 aa13.26□□□□□ -0.29
IRF1-202ENST00000405885 K7EIM0 57 aa13.26□□□□□ -0.29
IRF1-202ENST00000405885 CD5LO43866 347 aa13.26□□□□□ -0.29
IRF1-202ENST00000405885 YIF1AO95070 293 aa13.26□□□□□ -0.29
IRF1-202ENST00000405885 OR10J1P30954 320 aa13.26□□□□□ -0.29
IRF1-202ENST00000405885 RAB5CP51148 216 aa13.26□□□□□ -0.29
IRF1-202ENST00000405885 STPG3Q8N7X2 389 aa13.26□□□□□ -0.29
IRF1-202ENST00000405885 BPIFCQ8NFQ6 507 aa13.26□□□□□ -0.29
IRF1-202ENST00000405885 NOL4LQ96MY1 436 aaPredicted RBP13.26□□□□□ -0.29
IRF1-202ENST00000405885 IGLV11-55A0A075B6I3 123 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 FNDC10F2Z333 226 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 C17orf112F2Z3M2 114 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 SOX15O60248 233 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 MPDU1O75352 247 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 CCL20P78556 96 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 SRSF3P84103 164 aaKnown RBP13.25□□□□□ -0.29
IRF1-202ENST00000405885 RCC1LQ96I51 464 aaKnown RBP13.25□□□□□ -0.29
IRF1-202ENST00000405885 PFDN2Q9UHV9 154 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 PITPNC1Q9UKF7 332 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 MFSD2BA6NFX1 497 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 BLOC1S1P78537 153 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 TMEM95Q3KNT9 176 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 TMEM41BQ5BJD5 291 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 SFT2D1Q8WV19 159 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 SLC25A22Q9H936 323 aa13.25□□□□□ -0.29
IRF1-202ENST00000405885 OR2J3O76001 311 aa13.24□□□□□ -0.29
IRF1-202ENST00000405885 IGHV3-23P01764 117 aa13.24□□□□□ -0.29
IRF1-202ENST00000405885 FGF8P55075 233 aaPredicted RBP13.24□□□□□ -0.29
IRF1-202ENST00000405885 B2MP61769 119 aa13.24□□□□□ -0.29
IRF1-202ENST00000405885 LCN15Q6UWW0 184 aa13.24□□□□□ -0.29
IRF1-202ENST00000405885 SIGLECL1Q8N7X8 197 aa13.24□□□□□ -0.29
IRF1-202ENST00000405885 OR10G4Q8NGN3 311 aa13.24□□□□□ -0.29
IRF1-202ENST00000405885 OR10G9Q8NGN4 311 aa13.24□□□□□ -0.29
IRF1-202ENST00000405885 OR10G7Q8NGN6 311 aa13.24□□□□□ -0.29
IRF1-202ENST00000405885 LYPD6BQ8NI32 183 aa13.24□□□□□ -0.29
IRF1-202ENST00000405885 SLC45A2Q9UMX9 530 aa13.24□□□□□ -0.29
IRF1-202ENST00000405885 H2AFB1P0C5Y9 115 aa13.24□□□□□ -0.29
IRF1-202ENST00000405885 LINC00869P0C866 280 aa13.24□□□□□ -0.29
IRF1-202ENST00000405885 SPSB3Q6PJ21 355 aa13.24□□□□□ -0.29
IRF1-202ENST00000405885 ZFP92A6NM28 416 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 CORTO00230 105 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 NDUFB8O95169 186 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 PRR20EP86478 221 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 PRR20CP86479 221 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 PRR20DP86480 221 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 PRR20BP86481 221 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 PRR20AP86496 221 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 FAM122CQ6P4D5 195 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 TMEM116Q8NCL8 245 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 MS4A10Q96PG2 267 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 TMEM231Q9H6L2 316 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 ZNF355PQ9NSJ1 428 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 MED9Q9NWA0 146 aa13.23□□□□□ -0.29
IRF1-202ENST00000405885 TSPAN15O95858 294 aa13.22□□□□□ -0.29
IRF1-202ENST00000405885 SRP14P37108 136 aaKnown RBP13.22□□□□□ -0.29
IRF1-202ENST00000405885 SLC39A9Q9NUM3 307 aa13.22□□□□□ -0.29
IRF1-202ENST00000405885 VPREB3Q9UKI3 123 aa13.22□□□□□ -0.29
IRF1-202ENST00000405885 HIVEP2P31629 2446 aa13.22□□□□□ -0.29
IRF1-202ENST00000405885 IGHG2P01859 326 aa13.22□□□□□ -0.29
IRF1-202ENST00000405885 M6PRP20645 277 aa13.22□□□□□ -0.29
IRF1-202ENST00000405885 RAB31Q13636 194 aa13.22□□□□□ -0.29
IRF1-202ENST00000405885 AKIRIN2Q53H80 203 aa13.22□□□□□ -0.29
IRF1-202ENST00000405885 ETFRF1Q6IPR1 90 aa13.22□□□□□ -0.29
IRF1-202ENST00000405885 SLC35E3Q7Z769 313 aa13.22□□□□□ -0.29
IRF1-202ENST00000405885 MARC2Q969Z3 335 aa13.22□□□□□ -0.29
IRF1-202ENST00000405885 SEPSECSQ9HD40 501 aaKnown RBP13.22□□□□□ -0.29
IRF1-202ENST00000405885 TRAV41A0A0B4J266 112 aa13.21□□□□□ -0.29
IRF1-202ENST00000405885 RPL29P47914 159 aaKnown RBP13.21□□□□□ -0.29
IRF1-202ENST00000405885 FAM110DQ8TAY7 271 aaPredicted RBP13.21□□□□□ -0.29
IRF1-202ENST00000405885 M0QZK8 103 aa13.2□□□□□ -0.3
IRF1-202ENST00000405885 C19orf54Q5BKX5 351 aa13.2□□□□□ -0.3
IRF1-202ENST00000405885 SPATA31B1PQ5VZV4 182 aa13.2□□□□□ -0.3
IRF1-202ENST00000405885 CYP2G1PQ6ZSU1 146 aa13.2□□□□□ -0.3
IRF1-202ENST00000405885 Q71RC1 249 aaPredicted RBP13.2□□□□□ -0.3
IRF1-202ENST00000405885 THAP8Q8NA92 274 aa13.2□□□□□ -0.3
IRF1-202ENST00000405885 OR5R1Q8NH85 324 aa13.2□□□□□ -0.3
IRF1-202ENST00000405885 RAB24Q969Q5 203 aa13.2□□□□□ -0.3
IRF1-202ENST00000405885 DOK5Q9P104 306 aa13.2□□□□□ -0.3
IRF1-202ENST00000405885 TCRBV4S1A1TA0A5B7 111 aa13.2□□□□□ -0.3
IRF1-202ENST00000405885 BTBD17A6NE02 478 aa13.2□□□□□ -0.3
IRF1-202ENST00000405885 F8W735 103 aaPredicted RBP13.2□□□□□ -0.3
IRF1-202ENST00000405885 ACOT6Q3I5F7 207 aaPredicted RBP13.2□□□□□ -0.3
IRF1-202ENST00000405885 DPPA3Q6W0C5 159 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms