RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 RPS20P60866 119 aaKnown RBP9.75□□□□□ -0.85
RAPGEF3-204ENST00000405493 CENPWQ5EE01 88 aa9.75□□□□□ -0.85
RAPGEF3-204ENST00000405493 PAQR4Q8N4S7 273 aaPredicted RBP9.75□□□□□ -0.85
RAPGEF3-204ENST00000405493 OR10S1Q8NGN2 331 aa9.75□□□□□ -0.85
RAPGEF3-204ENST00000405493 RNASEH2CQ8TDP1 164 aaKnown RBP9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 FOXI3A8MTJ6 420 aaPredicted RBP9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 GCSHP23434 173 aa9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 FOXA2Q9Y261 457 aaPredicted RBP9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 NLRC5Q86WI3 1866 aa9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 NUP210Q8TEM1 1887 aaPredicted RBP9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 ABCA4P78363 2273 aa9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 IGKV1-9A0A0C4DH69 117 aa9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 RBFOX2O43251 390 aaKnown RBP eCLIP9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 CD33P20138 364 aa9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 MAP1LC3AQ9H492 121 aa9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 ETV2O00321 342 aaPredicted RBP9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 C2orf83Q53S99 150 aa9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 HIST3H2BBQ8N257 126 aa9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 FGFBP3Q8TAT2 258 aa9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 TMEM170AQ8WVE7 144 aa9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 SPOCK3Q9BQ16 436 aa9.74□□□□□ -0.85
RAPGEF3-204ENST00000405493 IGKV3-20P01619 116 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 DMRTC2Q8IXT2 367 aaPredicted RBP9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 HIST1H2BLQ99880 126 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 IGHV3-49A0A0A0MS15 119 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 IGHV2-26A0A0B4J1V2 119 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 ZNF324O75467 553 aaPredicted RBP9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 CGAP01215 116 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 OR9G9P0C7N8 305 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 C18orf12Q96KH6 178 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 MIEN1Q9BRT3 115 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 TRAV41A0A0B4J266 112 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 TIMM23O14925 209 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 IGHV1-8P0DP01 117 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 ZNF497Q6ZNH5 498 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 GATAD1Q8WUU5 269 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 ITLN2Q8WWU7 325 aaPredicted RBP9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 ZNF319Q9P2F9 582 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 H3BUX3 64 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 OTX1P32242 354 aaPredicted RBP9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 ATOH7Q8N100 152 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 CACNG8Q8WXS5 425 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 RNF166Q96A37 237 aaPredicted RBP9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 SAA2-SAA4A0A096LPE2 208 aa9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 SAA2P0DJI9 122 aaPredicted RBP9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 HIST1H1AQ02539 215 aaPredicted RBP9.73□□□□□ -0.85
RAPGEF3-204ENST00000405493 GBF1Q92538 1859 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 RPL23P62829 140 aaKnown RBP9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 CCL20P78556 96 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 CR1LQ2VPA4 569 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 MORN2Q502X0 79 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 AMMECR1LQ6DCA0 310 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 A0A0A6YYD4 124 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 E9PQ18 207 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 UQCRFS1P47985 274 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 SRSF4Q08170 494 aaKnown RBP9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 TPTE2P1Q5T6R2 138 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 IGKV1D-13A0A0B4J2D9 117 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 IGKV1-13P0DP09 117 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 GPR183P32249 361 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 TEX38Q6PEX7 206 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 WFDC1Q9HC57 220 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 TNFSF13O75888 250 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 DUSP14O95147 198 aaKnown RBP9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 PRTN3P24158 256 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 PLP1P60201 277 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 CLEC19AQ6UXS0 136 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 FOXL2NBQ6ZUU3 175 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 FAM89BQ8N5H3 189 aa9.72□□□□□ -0.85
RAPGEF3-204ENST00000405493 C19orf54Q5BKX5 351 aa9.71□□□□□ -0.85
RAPGEF3-204ENST00000405493 FAM74A4Q5TZK3 123 aa9.71□□□□□ -0.85
RAPGEF3-204ENST00000405493 FABP2P12104 132 aa9.71□□□□□ -0.85
RAPGEF3-204ENST00000405493 ADCYAP1P18509 176 aa9.71□□□□□ -0.85
RAPGEF3-204ENST00000405493 IL36BQ9NZH7 164 aa9.71□□□□□ -0.85
RAPGEF3-204ENST00000405493 ZFHX2Q9C0A1 2572 aaPredicted RBP9.71□□□□□ -0.85
RAPGEF3-204ENST00000405493 FBLL1A6NHQ2 334 aaKnown RBP9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 COL8A2P25067 703 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 DEFB113Q30KQ7 82 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 TSC2P49815 1807 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 SCO2A0A1W2PP80 73 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 CXCL1P09341 107 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 PYY3Q5JQD4 70 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 ZNF257Q9Y2Q1 563 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 TRBV24-1A0A075B6N3 115 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 IGHV3-11P01762 117 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 STAG3L2P0CL84 134 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 CD69Q07108 199 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 ZNF56Q15929 161 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 GFI1BQ5VTD9 330 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 MCRIP2Q9BUT9 160 aaKnown RBP9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 WNT10AQ9GZT5 417 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 FAM215AQ9Y5M1 114 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 TECTAO75443 2155 aa9.71□□□□□ -0.86
RAPGEF3-204ENST00000405493 TRAV24A0A0B4J272 114 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 HLA-DRB1P01911 266 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 SAA1P0DJI8 122 aaPredicted RBP9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 DNLZQ5SXM8 178 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 STHQ8IWL8 128 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 IMMP2LQ96T52 175 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 KLK15Q9H2R5 256 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms