RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 RPS10-NUDT3A0A1W2PQS6 291 aa22.55■■□□□ 1.2
USP42-202ENST00000404008 TSC22D2O75157 780 aa22.55■■□□□ 1.2
USP42-202ENST00000404008 HOXD3P31249 432 aaPredicted RBP22.55■■□□□ 1.2
USP42-202ENST00000404008 ARL3P36405 182 aa22.55■■□□□ 1.2
USP42-202ENST00000404008 SLURP1P55000 103 aa22.55■■□□□ 1.2
USP42-202ENST00000404008 MFAP4P55083 255 aa22.55■■□□□ 1.2
USP42-202ENST00000404008 UBAC2Q8NBM4 344 aa22.55■■□□□ 1.2
USP42-202ENST00000404008 TXN2Q99757 166 aa22.55■■□□□ 1.2
USP42-202ENST00000404008 PAIP2BQ9ULR5 123 aaKnown RBP22.55■■□□□ 1.2
USP42-202ENST00000404008 OR2T8A6NH00 312 aa22.54■■□□□ 1.2
USP42-202ENST00000404008 L7N2F9 121 aa22.54■■□□□ 1.2
USP42-202ENST00000404008 ZP3P21754 424 aa22.54■■□□□ 1.2
USP42-202ENST00000404008 VAMP2P63027 116 aa22.54■■□□□ 1.2
USP42-202ENST00000404008 Q56UQ5 140 aa22.54■■□□□ 1.2
USP42-202ENST00000404008 PVALBP20472 110 aaPredicted RBP22.53■■□□□ 1.2
USP42-202ENST00000404008 CD69Q07108 199 aa22.53■■□□□ 1.2
USP42-202ENST00000404008 ACSM6Q6P461 480 aa22.53■■□□□ 1.2
USP42-202ENST00000404008 PPP1R1CQ8WVI7 109 aa22.53■■□□□ 1.2
USP42-202ENST00000404008 BSCL2Q96G97 398 aaPredicted RBP22.53■■□□□ 1.2
USP42-202ENST00000404008 MRPL36Q9P0J6 103 aaKnown RBP22.53■■□□□ 1.2
USP42-202ENST00000404008 TGOLN2O43493 480 aa22.52■■□□□ 1.2
USP42-202ENST00000404008 GGCTO75223 188 aaKnown RBP22.52■■□□□ 1.2
USP42-202ENST00000404008 DEDDO75618 318 aa22.52■■□□□ 1.2
USP42-202ENST00000404008 LRRC37A5PQ49AS3 106 aa22.52■■□□□ 1.2
USP42-202ENST00000404008 ETFRF1Q6IPR1 90 aa22.52■■□□□ 1.2
USP42-202ENST00000404008 TMEM14EPQ6UXP3 125 aa22.52■■□□□ 1.2
USP42-202ENST00000404008 ZC4H2Q9NQZ6 224 aa22.52■■□□□ 1.2
USP42-202ENST00000404008 GAR1Q9NY12 217 aaKnown RBP22.52■■□□□ 1.2
USP42-202ENST00000404008 PRSS46E5RG02 174 aa22.51■■□□□ 1.19
USP42-202ENST00000404008 SLC25A4P12235 298 aa22.51■■□□□ 1.19
USP42-202ENST00000404008 RPEL1Q2QD12 228 aa22.51■■□□□ 1.19
USP42-202ENST00000404008 TREML4Q6UXN2 200 aa22.51■■□□□ 1.19
USP42-202ENST00000404008 OR4X1Q8NH49 305 aa22.51■■□□□ 1.19
USP42-202ENST00000404008 ZNF436Q9C0F3 470 aaPredicted RBP22.51■■□□□ 1.19
USP42-202ENST00000404008 GPX4P36969 197 aaPredicted RBP22.5■■□□□ 1.19
USP42-202ENST00000404008 NPBWR1P48145 328 aa22.5■■□□□ 1.19
USP42-202ENST00000404008 PRSS54Q6PEW0 395 aa22.5■■□□□ 1.19
USP42-202ENST00000404008 SPSB3Q6PJ21 355 aa22.5■■□□□ 1.19
USP42-202ENST00000404008 SLC16A13Q7RTY0 426 aa22.5■■□□□ 1.19
USP42-202ENST00000404008 WFDC9Q8NEX5 89 aa22.5■■□□□ 1.19
USP42-202ENST00000404008 DLX4Q92988 240 aaPredicted RBP22.5■■□□□ 1.19
USP42-202ENST00000404008 CTSGP08311 255 aa22.5■■□□□ 1.19
USP42-202ENST00000404008 KLF5Q13887 457 aaPredicted RBP22.5■■□□□ 1.19
USP42-202ENST00000404008 Q6ZNX1 250 aa22.5■■□□□ 1.19
USP42-202ENST00000404008 DCUN1D4Q92564 292 aa22.5■■□□□ 1.19
USP42-202ENST00000404008 CHRDL1Q9BU40 450 aa22.5■■□□□ 1.19
USP42-202ENST00000404008 PMS2P5A8MQ11 134 aa22.49■■□□□ 1.19
USP42-202ENST00000404008 H0YIZ8 118 aa22.49■■□□□ 1.19
USP42-202ENST00000404008 GNG7O60262 68 aa22.49■■□□□ 1.19
USP42-202ENST00000404008 OR2C1O95371 312 aa22.49■■□□□ 1.19
USP42-202ENST00000404008 RLN2P04090 185 aa22.49■■□□□ 1.19
USP42-202ENST00000404008 METTL15P1P0C7V9 234 aa22.49■■□□□ 1.19
USP42-202ENST00000404008 ADMP35318 185 aa22.49■■□□□ 1.19
USP42-202ENST00000404008 TMEM116Q8NCL8 245 aa22.49■■□□□ 1.19
USP42-202ENST00000404008 CACNG8Q8WXS5 425 aa22.49■■□□□ 1.19
USP42-202ENST00000404008 LYRM2Q9NU23 88 aaPredicted RBP22.49■■□□□ 1.19
USP42-202ENST00000404008 OR5AC2Q9NZP5 309 aa22.49■■□□□ 1.19
USP42-202ENST00000404008 MPC2O95563 127 aa22.48■■□□□ 1.19
USP42-202ENST00000404008 CD33P20138 364 aa22.48■■□□□ 1.19
USP42-202ENST00000404008 BCAP31P51572 246 aa22.48■■□□□ 1.19
USP42-202ENST00000404008 CAV2P51636 162 aa22.48■■□□□ 1.19
USP42-202ENST00000404008 ASB13Q8WXK3 278 aa22.48■■□□□ 1.19
USP42-202ENST00000404008 CLN5O75503 358 aa22.47■■□□□ 1.19
USP42-202ENST00000404008 CCNKO75909 580 aa22.47■■□□□ 1.19
USP42-202ENST00000404008 GIPP09681 153 aaPredicted RBP22.47■■□□□ 1.19
USP42-202ENST00000404008 RND2P52198 227 aa22.47■■□□□ 1.19
USP42-202ENST00000404008 OR8G2PQ6IF36 304 aa22.47■■□□□ 1.19
USP42-202ENST00000404008 E5RGE8 158 aa22.46■■□□□ 1.19
USP42-202ENST00000404008 NUPL2O15504 423 aaKnown RBP22.46■■□□□ 1.19
USP42-202ENST00000404008 PET100P0DJ07 73 aa22.46■■□□□ 1.19
USP42-202ENST00000404008 SYNJ2BPP57105 145 aa22.46■■□□□ 1.19
USP42-202ENST00000404008 GAMTQ14353 236 aa22.46■■□□□ 1.19
USP42-202ENST00000404008 GPHB5Q86YW7 130 aa22.46■■□□□ 1.19
USP42-202ENST00000404008 ACY3Q96HD9 319 aa22.46■■□□□ 1.19
USP42-202ENST00000404008 RNF126Q9BV68 326 aa22.46■■□□□ 1.19
USP42-202ENST00000404008 FAM24AA6NFZ4 105 aa22.45■■□□□ 1.18
USP42-202ENST00000404008 OVOL1O14753 267 aa22.45■■□□□ 1.18
USP42-202ENST00000404008 C1QL4Q86Z23 238 aa22.45■■□□□ 1.18
USP42-202ENST00000404008 NPIPB3Q92617 1050 aa22.45■■□□□ 1.18
USP42-202ENST00000404008 SLC35E1Q96K37 410 aa22.45■■□□□ 1.18
USP42-202ENST00000404008 HAPLN4Q86UW8 402 aa22.44■■□□□ 1.18
USP42-202ENST00000404008 IGHV3-35A0A0C4DH35 117 aa22.43■■□□□ 1.18
USP42-202ENST00000404008 P2RY1P47900 373 aa22.43■■□□□ 1.18
USP42-202ENST00000404008 ACOT7LQ6ZUV0 252 aa22.43■■□□□ 1.18
USP42-202ENST00000404008 OR10P1Q8NGE3 313 aa22.43■■□□□ 1.18
USP42-202ENST00000404008 ZNF414Q96IQ9 312 aa22.43■■□□□ 1.18
USP42-202ENST00000404008 TRAV30A0A087WSZ9 112 aa22.42■■□□□ 1.18
USP42-202ENST00000404008 IGSF23A1L1A6 192 aa22.42■■□□□ 1.18
USP42-202ENST00000404008 IGLC1P0CG04 106 aa22.42■■□□□ 1.18
USP42-202ENST00000404008 RAP2BP61225 183 aa22.42■■□□□ 1.18
USP42-202ENST00000404008 RELQ04864 619 aaPredicted RBP22.42■■□□□ 1.18
USP42-202ENST00000404008 ARL16Q0P5N6 197 aa22.42■■□□□ 1.18
USP42-202ENST00000404008 FAM106AQ4KMX7 169 aa22.42■■□□□ 1.18
USP42-202ENST00000404008 TMEM252Q8N6L7 170 aa22.42■■□□□ 1.18
USP42-202ENST00000404008 RCC1LQ96I51 464 aaKnown RBP22.42■■□□□ 1.18
USP42-202ENST00000404008 TRAV14DV4A0A0A6YYC5 116 aa22.41■■□□□ 1.18
USP42-202ENST00000404008 LGALS9O00182 355 aa22.41■■□□□ 1.18
USP42-202ENST00000404008 SCGB2A1O75556 95 aa22.41■■□□□ 1.18
USP42-202ENST00000404008 OR10J1P30954 320 aa22.41■■□□□ 1.18
USP42-202ENST00000404008 REC114Q7Z4M0 266 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms