RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 WFDC3Q8IUB2 231 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 APRG1Q8IVJ8 170 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 KIR2DL5AQ8N109 375 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 KIR2DL5BQ8NHK3 375 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 GLYATL2Q8WU03 294 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 ST8SIA2Q92186 375 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 RBPMSQ93062 196 aaKnown RBP11.36□□□□□ -0.59
TPM1-207ENST00000403994 GALNT14Q96FL9 552 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 ENY2Q9NPA8 101 aa11.36□□□□□ -0.59
TPM1-207ENST00000403994 MRPL36Q9P0J6 103 aaKnown RBP11.36□□□□□ -0.59
TPM1-207ENST00000403994 PUS1Q9Y606 427 aaKnown RBP eCLIP11.36□□□□□ -0.59
TPM1-207ENST00000403994 A0A0J9YWU9 116 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 TEX13DA0A0J9YY54 714 aaPredicted RBP11.35□□□□□ -0.59
TPM1-207ENST00000403994 A0A1B0GU03 582 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 CRYM-AS1A6NIL9 109 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 UBE2CO00762 179 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 SPRY2O43597 315 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 APOHP02749 345 aaPredicted RBP11.35□□□□□ -0.59
TPM1-207ENST00000403994 BMI1P35226 326 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 OPRK1P41145 380 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 SPCS3P61009 180 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 LYG2Q86SG7 212 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 STPG3Q8N7X2 389 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 OR51S1Q8NGJ8 323 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 PRRT1Q99946 306 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 C6orf62Q9GZU0 229 aaPredicted RBP11.35□□□□□ -0.59
TPM1-207ENST00000403994 VSIRQ9H7M9 311 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 MAP6D1Q9H9H5 199 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 RABL2AQ9UBK7 228 aaPredicted RBP11.35□□□□□ -0.59
TPM1-207ENST00000403994 CACNG5Q9UF02 275 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 RABL2BQ9UNT1 228 aa11.35□□□□□ -0.59
TPM1-207ENST00000403994 ANKRD20A5PA0PJZ0 165 aa11.34□□□□□ -0.59
TPM1-207ENST00000403994 H3BMQ9 156 aa11.34□□□□□ -0.59
TPM1-207ENST00000403994 GSTZ1O43708 216 aaPredicted RBP11.34□□□□□ -0.59
TPM1-207ENST00000403994 TMEM50AO95807 157 aa11.34□□□□□ -0.59
TPM1-207ENST00000403994 EWSR1Q01844 656 aaKnown RBP eCLIP11.34□□□□□ -0.59
TPM1-207ENST00000403994 TNFRSF9Q07011 255 aa11.34□□□□□ -0.59
TPM1-207ENST00000403994 TMEM268Q5VZI3 342 aa11.34□□□□□ -0.59
TPM1-207ENST00000403994 TCF24Q7RTU0 167 aa11.34□□□□□ -0.59
TPM1-207ENST00000403994 SELENOHQ8IZQ5 122 aaKnown RBP11.34□□□□□ -0.59
TPM1-207ENST00000403994 GBGT1Q8N5D6 347 aa11.34□□□□□ -0.59
TPM1-207ENST00000403994 OR52E5Q8NH55 327 aa11.34□□□□□ -0.59
TPM1-207ENST00000403994 RNF183Q96D59 192 aa11.34□□□□□ -0.59
TPM1-207ENST00000403994 SLIRPQ9GZT3 109 aaKnown RBP11.34□□□□□ -0.59
TPM1-207ENST00000403994 GPR132Q9UNW8 380 aa11.34□□□□□ -0.59
TPM1-207ENST00000403994 IGHV3-66A0A0C4DH42 116 aa11.33□□□□□ -0.6
TPM1-207ENST00000403994 NOL3O60936 208 aaKnown RBP11.33□□□□□ -0.6
TPM1-207ENST00000403994 CLN5O75503 358 aa11.33□□□□□ -0.6
TPM1-207ENST00000403994 CD5P06127 495 aa11.33□□□□□ -0.6
TPM1-207ENST00000403994 RPL5P46777 297 aaKnown RBP11.33□□□□□ -0.6
TPM1-207ENST00000403994 DHODHQ02127 395 aa11.33□□□□□ -0.6
TPM1-207ENST00000403994 LILRB2Q8N423 598 aa11.33□□□□□ -0.6
TPM1-207ENST00000403994 OR4X1Q8NH49 305 aa11.33□□□□□ -0.6
TPM1-207ENST00000403994 TMEM230Q96A57 120 aa11.33□□□□□ -0.6
TPM1-207ENST00000403994 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.33□□□□□ -0.6
TPM1-207ENST00000403994 DFFBO76075 338 aa11.32□□□□□ -0.6
TPM1-207ENST00000403994 IGKV1-17P01599 117 aa11.32□□□□□ -0.6
TPM1-207ENST00000403994 HTR2BP41595 481 aa11.32□□□□□ -0.6
TPM1-207ENST00000403994 PMS2P11Q13670 270 aa11.32□□□□□ -0.6
TPM1-207ENST00000403994 GPR146Q96CH1 333 aa11.32□□□□□ -0.6
TPM1-207ENST00000403994 MS4A6AQ9H2W1 248 aa11.32□□□□□ -0.6
TPM1-207ENST00000403994 PRR13Q9NZ81 148 aa11.32□□□□□ -0.6
TPM1-207ENST00000403994 RSL24D1Q9UHA3 163 aaKnown RBP11.32□□□□□ -0.6
TPM1-207ENST00000403994 TMEM56-RWDD3S4R434 201 aa11.32□□□□□ -0.6
TPM1-207ENST00000403994 BIRC6Q9NR09 4857 aa11.31□□□□□ -0.6
TPM1-207ENST00000403994 CXorf65A6NEN9 183 aa11.31□□□□□ -0.6
TPM1-207ENST00000403994 SCGB2A1O75556 95 aa11.31□□□□□ -0.6
TPM1-207ENST00000403994 NXPH3O95157 252 aa11.31□□□□□ -0.6
TPM1-207ENST00000403994 PAFAH1B2P68402 229 aa11.31□□□□□ -0.6
TPM1-207ENST00000403994 TMEM187Q14656 261 aa11.31□□□□□ -0.6
TPM1-207ENST00000403994 MLANAQ16655 118 aa11.31□□□□□ -0.6
TPM1-207ENST00000403994 C2orf83Q53S99 150 aa11.31□□□□□ -0.6
TPM1-207ENST00000403994 FAM24BQ8N5W8 94 aa11.31□□□□□ -0.6
TPM1-207ENST00000403994 SLC24A4Q8NFF2 622 aa11.31□□□□□ -0.6
TPM1-207ENST00000403994 IL22RA2Q969J5 263 aa11.31□□□□□ -0.6
TPM1-207ENST00000403994 TMEM231Q9H6L2 316 aa11.31□□□□□ -0.6
TPM1-207ENST00000403994 HEYLQ9NQ87 328 aaPredicted RBP11.31□□□□□ -0.6
TPM1-207ENST00000403994 TRAV2A0A0B4J234 112 aa11.3□□□□□ -0.6
TPM1-207ENST00000403994 RPS10-NUDT3A0A1W2PQS6 291 aa11.3□□□□□ -0.6
TPM1-207ENST00000403994 CEBPZOSA8MTT3 80 aa11.3□□□□□ -0.6
TPM1-207ENST00000403994 CRYBB3P26998 211 aa11.3□□□□□ -0.6
TPM1-207ENST00000403994 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
TPM1-207ENST00000403994 TIGITQ495A1 244 aa11.3□□□□□ -0.6
TPM1-207ENST00000403994 TMEM170AQ8WVE7 144 aa11.3□□□□□ -0.6
TPM1-207ENST00000403994 METTL26Q96S19 204 aa11.3□□□□□ -0.6
TPM1-207ENST00000403994 SOSTQ9BQB4 213 aa11.3□□□□□ -0.6
TPM1-207ENST00000403994 MCUBQ9NWR8 336 aa11.3□□□□□ -0.6
TPM1-207ENST00000403994 SCP2D1Q9UJQ7 156 aa11.3□□□□□ -0.6
TPM1-207ENST00000403994 NUPR2A6NF83 97 aa11.29□□□□□ -0.6
TPM1-207ENST00000403994 DNASE2O00115 360 aaPredicted RBP11.29□□□□□ -0.6
TPM1-207ENST00000403994 IGLC1P0CG04 106 aa11.29□□□□□ -0.6
TPM1-207ENST00000403994 SULT1A3P0DMM9 295 aa11.29□□□□□ -0.6
TPM1-207ENST00000403994 SULT1A4P0DMN0 295 aa11.29□□□□□ -0.6
TPM1-207ENST00000403994 ATF4P18848 351 aaPredicted RBP11.29□□□□□ -0.6
TPM1-207ENST00000403994 NPPCP23582 126 aa11.29□□□□□ -0.6
TPM1-207ENST00000403994 TNFSF8P32971 234 aa11.29□□□□□ -0.6
TPM1-207ENST00000403994 RND2P52198 227 aa11.29□□□□□ -0.6
TPM1-207ENST00000403994 SUPT4H1P63272 117 aaKnown RBP11.29□□□□□ -0.6
TPM1-207ENST00000403994 NMSQ5H8A3 153 aa11.29□□□□□ -0.6
TPM1-207ENST00000403994 PRSS54Q6PEW0 395 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms