RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 STUMQ69YW2 141 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 OR5B3Q8NH48 314 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 FAM103A1Q9BTL3 118 aaKnown RBP16.11■□□□□ 0.17
CCDC47-202ENST00000403162 BMPR1BO00238 502 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 SPRY3O43610 288 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 SPINK4O60575 86 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 MMP23AO75900 390 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 CT45A6P0DMU7 189 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 CT45A5P0DMU8 189 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 CT45A7P0DMV0 189 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 RNASE2P10153 161 aaKnown RBP16.11■□□□□ 0.17
CCDC47-202ENST00000403162 GLRXP35754 106 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 CTRLP40313 264 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 AMTP48728 403 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 SLC25A48Q6ZT89 311 aaKnown RBP16.11■□□□□ 0.17
CCDC47-202ENST00000403162 RCHY1Q96PM5 261 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 SLC35D1Q9NTN3 355 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 BET1LQ9NYM9 111 aa16.11■□□□□ 0.17
CCDC47-202ENST00000403162 A0A0G2JNJ9 132 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 SRRM4A7MD48 611 aaKnown RBP16.1■□□□□ 0.17
CCDC47-202ENST00000403162 IGKV1-16P04430 117 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 GNG10P50151 68 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 TCL1AP56279 114 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 DUX4L9Q6RFH8 374 aaPredicted RBP16.1■□□□□ 0.17
CCDC47-202ENST00000403162 COMMD5Q9GZQ3 224 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 GCM1Q9NP62 436 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 RNF7Q9UBF6 113 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 Q9UFV3 132 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 IGLV3-9A0A075B6K5 115 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 IZUMO1RA6ND01 250 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 ZNF253O75346 499 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 ZNF324O75467 553 aaPredicted RBP16.1■□□□□ 0.17
CCDC47-202ENST00000403162 CD69Q07108 199 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 KIAA1644Q3SXP7 199 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 OR9G1Q8NH87 305 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 CDC42EP3Q9UKI2 254 aa16.1■□□□□ 0.17
CCDC47-202ENST00000403162 PSMB11A5LHX3 300 aa16.09■□□□□ 0.17
CCDC47-202ENST00000403162 M0R1B8 84 aa16.09■□□□□ 0.17
CCDC47-202ENST00000403162 SRIP30626 198 aa16.09■□□□□ 0.17
CCDC47-202ENST00000403162 SLC35B1P78383 322 aa16.09■□□□□ 0.17
CCDC47-202ENST00000403162 GAFA1Q96PS6 74 aa16.09■□□□□ 0.17
CCDC47-202ENST00000403162 VKORC1Q9BQB6 163 aa16.09■□□□□ 0.17
CCDC47-202ENST00000403162 LPAR2Q9HBW0 351 aa16.09■□□□□ 0.17
CCDC47-202ENST00000403162 RPUSD1Q9UJJ7 312 aaKnown RBP16.09■□□□□ 0.17
CCDC47-202ENST00000403162 RAI1Q7Z5J4 1906 aaPredicted RBP16.09■□□□□ 0.17
CCDC47-202ENST00000403162 A6NNC1 897 aa16.09■□□□□ 0.17
CCDC47-202ENST00000403162 MGST1P10620 155 aaKnown RBP16.09■□□□□ 0.17
CCDC47-202ENST00000403162 CA7P43166 264 aa16.09■□□□□ 0.17
CCDC47-202ENST00000403162 MRPL54Q6P161 138 aaKnown RBP16.09■□□□□ 0.17
CCDC47-202ENST00000403162 CACNG8Q8WXS5 425 aa16.09■□□□□ 0.17
CCDC47-202ENST00000403162 FAM167A-AS1Q96KT0 104 aa16.09■□□□□ 0.17
CCDC47-202ENST00000403162 SAA1P0DJI8 122 aaPredicted RBP16.08■□□□□ 0.16
CCDC47-202ENST00000403162 C3orf36Q3SXR2 165 aa16.08■□□□□ 0.16
CCDC47-202ENST00000403162 TIMM23BQ5SRD1 257 aa16.08■□□□□ 0.16
CCDC47-202ENST00000403162 RASL11AQ6T310 242 aa16.08■□□□□ 0.16
CCDC47-202ENST00000403162 ZNF714Q96N38 554 aa16.08■□□□□ 0.16
CCDC47-202ENST00000403162 SLC25A2Q9BXI2 301 aa16.08■□□□□ 0.16
CCDC47-202ENST00000403162 GOLT1BQ9Y3E0 138 aa16.08■□□□□ 0.16
CCDC47-202ENST00000403162 WIPF2Q8TF74 440 aaPredicted RBP16.07■□□□□ 0.16
CCDC47-202ENST00000403162 RND1Q92730 232 aa16.07■□□□□ 0.16
CCDC47-202ENST00000403162 TNCP24821 2201 aa16.07■□□□□ 0.16
CCDC47-202ENST00000403162 APCSP02743 223 aa16.07■□□□□ 0.16
CCDC47-202ENST00000403162 PMCHP20382 165 aa16.07■□□□□ 0.16
CCDC47-202ENST00000403162 MLANAQ16655 118 aa16.07■□□□□ 0.16
CCDC47-202ENST00000403162 SERTAD4Q9NUC0 356 aa16.07■□□□□ 0.16
CCDC47-202ENST00000403162 COL6A6A6NMZ7 2263 aa16.07■□□□□ 0.16
CCDC47-202ENST00000403162 UBE2L3P68036 154 aaKnown RBP16.06■□□□□ 0.16
CCDC47-202ENST00000403162 SPATA45Q537H7 98 aa16.06■□□□□ 0.16
CCDC47-202ENST00000403162 ZNF788Q6ZQV5 615 aa16.06■□□□□ 0.16
CCDC47-202ENST00000403162 FAM231DQ6ZW35 169 aa16.06■□□□□ 0.16
CCDC47-202ENST00000403162 NIT1Q86X76 327 aa16.06■□□□□ 0.16
CCDC47-202ENST00000403162 MRPL27Q9P0M9 148 aaKnown RBP16.06■□□□□ 0.16
CCDC47-202ENST00000403162 INS-IGF2F8WCM5 200 aa16.06■□□□□ 0.16
CCDC47-202ENST00000403162 CCL21O00585 134 aa16.06■□□□□ 0.16
CCDC47-202ENST00000403162 BTF3P20290 206 aaKnown RBP16.06■□□□□ 0.16
CCDC47-202ENST00000403162 PRRX1P54821 245 aa16.06■□□□□ 0.16
CCDC47-202ENST00000403162 VHLLQ6RSH7 139 aa16.06■□□□□ 0.16
CCDC47-202ENST00000403162 C19orf35Q6ZS72 473 aa16.06■□□□□ 0.16
CCDC47-202ENST00000403162 OSR1Q8TAX0 266 aaPredicted RBP16.06■□□□□ 0.16
CCDC47-202ENST00000403162 DNAJC4Q9NNZ3 241 aa16.06■□□□□ 0.16
CCDC47-202ENST00000403162 ZNF331Q9NQX6 463 aaPredicted RBP16.06■□□□□ 0.16
CCDC47-202ENST00000403162 NDUFA4L2Q9NRX3 87 aa16.06■□□□□ 0.16
CCDC47-202ENST00000403162 USF1P22415 310 aaPredicted RBP16.05■□□□□ 0.16
CCDC47-202ENST00000403162 COL5A1-AS1Q5SY13 56 aa16.05■□□□□ 0.16
CCDC47-202ENST00000403162 MORN5Q5VZ52 161 aa16.05■□□□□ 0.16
CCDC47-202ENST00000403162 ALKBH2Q6NS38 261 aa16.05■□□□□ 0.16
CCDC47-202ENST00000403162 ZNF474Q6S9Z5 364 aaPredicted RBP16.05■□□□□ 0.16
CCDC47-202ENST00000403162 ZNF833PQ6ZTB9 187 aa16.05■□□□□ 0.16
CCDC47-202ENST00000403162 OR10W1Q8NGF6 305 aa16.05■□□□□ 0.16
CCDC47-202ENST00000403162 TSKUQ8WUA8 353 aa16.05■□□□□ 0.16
CCDC47-202ENST00000403162 MBD6Q96DN6 1003 aa16.05■□□□□ 0.16
CCDC47-202ENST00000403162 C3orf79P0CE67 100 aa16.04■□□□□ 0.16
CCDC47-202ENST00000403162 CCL13Q99616 98 aa16.04■□□□□ 0.16
CCDC47-202ENST00000403162 UQCR10Q9UDW1 63 aa16.04■□□□□ 0.16
CCDC47-202ENST00000403162 NPSP0C0P6 89 aa16.04■□□□□ 0.16
CCDC47-202ENST00000403162 LINC00614P0C842 121 aa16.04■□□□□ 0.16
CCDC47-202ENST00000403162 TNFAIP6P98066 277 aaPredicted RBP16.04■□□□□ 0.16
CCDC47-202ENST00000403162 FAM216BQ8N7L0 139 aa16.04■□□□□ 0.16
CCDC47-202ENST00000403162 PPP1R14DQ9NXH3 145 aa16.04■□□□□ 0.16
CCDC47-202ENST00000403162 TRAV5A0A0B4J249 113 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms