RNA–Protein interactions for RNA: ENST00000400566.5

SAMSN1-203, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMSN1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-203ENST00000400566 ARV1Q9H2C2 271 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 PARP11Q9NR21 331 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 DMRT1Q9Y5R6 373 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 C2CD3Q4AC94 2353 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 IGLV11-55A0A075B6I3 123 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 BORCS7-ASMTA0A0B4J1R7 106 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 DNAJC9-AS1A6NH13 148 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 LINC01548A6NM66 108 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 AP4M1O00189 453 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 TSPAN9O75954 239 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 TPT1P13693 172 aaKnown RBP4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 MDKP21741 143 aaPredicted RBP4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 HILS1P60008 231 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 RPL15P61313 204 aaKnown RBP4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 UBA52P62987 128 aaKnown RBP4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 IFITM2Q01629 132 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 CD69Q07108 199 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 EXOSC2Q13868 293 aaKnown RBP4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 ANKRD39Q53RE8 183 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 UNQ5815/PRO19632Q6UWF5 114 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 SLC35E3Q7Z769 313 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 Q8N2B8 174 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 FAM110DQ8TAY7 271 aaPredicted RBP4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 ZNF418Q8TF45 676 aaPredicted RBP4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 ST8SIA2Q92186 375 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 PHYHIPLQ96FC7 376 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 FNDC4Q9H6D8 234 aaPredicted RBP4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 SLA2Q9H6Q3 261 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 UQCC1Q9NVA1 299 aa4.32□□□□□ -1.72
SAMSN1-203ENST00000400566 TEP1Q99973 2627 aaKnown RBP4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 SETD2Q9BYW2 2564 aaPredicted RBP4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 TRAV41A0A0B4J266 112 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 INAFM1C9JVW0 142 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 G3V318 75 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 TRIM77I1YAP6 450 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 BRI3O95415 125 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 FAM157CP0CG43 387 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 DEFA4P12838 97 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 PPIFP30405 207 aaKnown RBP4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 GPX4P36969 197 aaPredicted RBP4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 ECSCRQ19T08 205 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 C9orf152Q5JTZ5 239 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 ETFRF1Q6IPR1 90 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 TEX261Q6UWH6 196 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 C19orf35Q6ZS72 473 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 SLC16A13Q7RTY0 426 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 GINS3Q9BRX5 216 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 PRSS22Q9GZN4 317 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 WDR61Q9GZS3 305 aaKnown RBP4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 ZNF702PQ9H963 129 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 ESM1Q9NQ30 184 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 TNFRSF19Q9NS68 423 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 WDR83OSQ9Y284 106 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 LSM4Q9Y4Z0 139 aaKnown RBP4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 JMJD1CQ15652 2540 aa4.31□□□□□ -1.72
SAMSN1-203ENST00000400566 TRBV9A0A0B4J1U6 114 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 UBE2L5PA0A1B0GUS4 154 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 RPS10-NUDT3A0A1W2PQS6 291 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 H3BUA1 57 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 I3L2K1 104 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 K7EIM0 57 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 CYB5BO43169 146 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 SOX15O60248 233 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 MPDU1O75352 247 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 CRLF1O75462 422 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 CFDP00746 253 aaPredicted RBP4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 IFNA5P01569 189 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 RNASE1P07998 156 aaKnown RBP4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 SPP1P10451 314 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 HIST1H1BP16401 226 aaKnown RBP4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 OPRK1P41145 380 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 CFHR3Q02985 330 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 GAMTQ14353 236 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 SLC25A24Q6NUK1 477 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 Q71RC1 249 aaPredicted RBP4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 TMEM144Q7Z5S9 345 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 TMEM116Q8NCL8 245 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 ZNF680Q8NEM1 530 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 OR5T1Q8NG75 326 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 TAF15Q92804 592 aaKnown RBP eCLIP4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 GNPNAT1Q96EK6 184 aaPredicted RBP4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 DUX5Q96PT3 197 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 JMJD8Q96S16 334 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 NPVFQ9HCQ7 196 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 THYN1Q9P016 225 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 NF1P21359 2839 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 MT-CO2P00403 227 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 IFNA7P01567 189 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 PRH1P02810 166 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 SEC11BP0C7V7 166 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 ATP6V0CP27449 155 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 AKR1C1Q04828 323 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 MLANAQ16655 118 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 EIF5AL1Q6IS14 154 aaKnown RBP4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 TEPPQ6URK8 271 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 BTNL8Q6UX41 500 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 ZNF767PQ75MW2 155 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 CENPVQ7Z7K6 275 aaPredicted RBP4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 HSD17B11Q8NBQ5 300 aa4.3□□□□□ -1.72
SAMSN1-203ENST00000400566 NECAP1Q8NC96 275 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms