RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 MAST2Q6P0Q8 1798 aa7.3□□□□□ -1.24
CACNA1C-220ENST00000399655 LIFP15018 202 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 PSG3Q16557 428 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 GVQW1Q8N7I0 195 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 VGLL2Q8N8G2 317 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 SIGLEC7Q9Y286 467 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 TMEM170AQ8WVE7 144 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 PRSS21Q9Y6M0 314 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 ARAP2Q8WZ64 1704 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 A0A0J9YW62 118 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 C12orf73Q69YU5 71 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 ZNF250P15622 560 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 EGR4Q05215 589 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 REG1BP48304 166 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 KLF16Q9BXK1 252 aaPredicted RBP7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 TMEM229AB2RXF0 380 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 NRN1LQ496H8 165 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 FAM19A2Q8N3H0 131 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 KCNK17Q96T54 332 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 MROH1Q8NDA8 1641 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 APOBEC3AP31941 199 aaPredicted RBP7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 ZNF319Q9P2F9 582 aa7.29□□□□□ -1.24
CACNA1C-220ENST00000399655 RIMBP3CA6NJZ7 1639 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 RIMBP3BA6NNM3 1639 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 RIMBP3Q9UFD9 1639 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 PLA2G3Q9NZ20 509 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 TRAV12-1A0A0B4J245 112 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 C1QAP02745 245 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 HLA-DRB4P13762 266 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 HLA-DRB4X5D2U9 266 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 TMEM52BQ4KMG9 183 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 IL17RELQ6ZVW7 336 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 Q9H3A6 140 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 CCL19Q99731 98 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 ZIC3O60481 467 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 PRR7Q8TB68 274 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 ORMDL1Q9P0S3 153 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 ARSAP15289 507 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 OBSL1O75147 1896 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 PEAK1Q9H792 1746 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 UBE2E1P51965 193 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 OVOL1O14753 267 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 GUSBP1Q15486 140 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 ROBO1Q9Y6N7 1651 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 IGHV3-20A0A0C4DH32 117 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 UPK3AO75631 287 aa7.28□□□□□ -1.24
CACNA1C-220ENST00000399655 A0A0U1RRA0 63 aa7.27□□□□□ -1.24
CACNA1C-220ENST00000399655 A0A1B0GWJ7 208 aa7.27□□□□□ -1.24
CACNA1C-220ENST00000399655 LINC01551Q86U37 167 aa7.27□□□□□ -1.24
CACNA1C-220ENST00000399655 APCDD1LQ8NCL9 501 aa7.27□□□□□ -1.24
CACNA1C-220ENST00000399655 CRYBA4P53673 196 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 FOXL2P58012 376 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 NUP188Q5SRE5 1749 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 CXCL3P19876 107 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 HLA-DMBP28068 263 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 IGHV3-64A0A075B6Q5 118 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 TIMM23O14925 209 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 ZNF79Q15937 498 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 SCRT2Q9NQ03 307 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 DIP2CQ9Y2E4 1556 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 AGFG2O95081 481 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 C9JQL5 133 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 MPV17P39210 176 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 FGF12P61328 243 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 ACTL10Q5JWF8 245 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 KDM6BO15054 1643 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 NMBP08949 121 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 RUNX1Q01196 453 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 FNDC10F2Z333 226 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 TM4SF5O14894 197 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 CGB3P0DN86 165 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 KLF5Q13887 457 aaPredicted RBP7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 FAM78AQ5JUQ0 283 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 JPT1Q9UK76 154 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 LINC01620Q4KN68 170 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 IDI2-AS1Q9NZ38 188 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 CARHSP1Q9Y2V2 147 aaKnown RBP7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 RBBP6Q7Z6E9 1792 aaKnown RBP7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 TMEM131Q92545 1883 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 TPRX1Q8N7U7 411 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 C21orf62Q9NYP8 219 aa7.27□□□□□ -1.25
CACNA1C-220ENST00000399655 RBM38Q9H0Z9 239 aaKnown RBP7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 NDUFC2-KCTD14E9PQ53 114 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 A0A1W2PPV9 198 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 PPP1R32Q7Z5V6 425 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 OSR1Q8TAX0 266 aaPredicted RBP7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 SLC25A39Q9BZJ4 359 aaPredicted RBP7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 A0A1B0GUL6 1792 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 PSMB8P28062 276 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 PDLIM4P50479 330 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 A8MWP6 167 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 OSTCQ9NRP0 149 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 VDAC2P45880 294 aaPredicted RBP7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 PVRIGQ6DKI7 326 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 TMEM179BQ7Z7N9 219 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 C15orf61A6NNL5 157 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 WNT2P09544 360 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 PIGYQ3MUY2 71 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 USP17L23D6RBM5 183 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 PEBP1P30086 187 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms