RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 GAGE12GP0CL81 117 aa9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 GAGE12IP0CL82 117 aa9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 SLC25A16P16260 332 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 GLIPR1P48060 266 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 ATG4DQ86TL0 474 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 BOD1L2Q8IYS8 172 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 COL22A1Q8NFW1 1626 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 CDK5RAP2Q96SN8 1893 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 FXYD1O00168 92 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 CRLF1O75462 422 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 RCC1LQ96I51 464 aaKnown RBP9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 CHAC1Q9BUX1 264 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 IGLV3-16A0A075B6K0 115 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 IGHV3-16A0A0C4DH30 117 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 SERF1AO75920 110 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 ACYP1P07311 99 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 ATP5G3P48201 142 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 RND3P61587 244 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 PMVKQ15126 192 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 ZNF876PQ49A33 203 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 C8orf82Q6P1X6 216 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 DNAJC30Q96LL9 226 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 IMMP1LQ96LU5 166 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 ASPHD2Q6ICH7 369 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 SCRT2Q9NQ03 307 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 MBNL3Q9NUK0 354 aaKnown RBP9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 IL20Q9NYY1 176 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 ITGB4P16144 1822 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 FMC1Q96HJ9 113 aa9.33□□□□□ -0.92
CACNA1C-217ENST00000399641 A0A1B0GUT8 65 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 SOCS3O14543 225 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 CXCL2P19875 107 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 FOXG1P55316 489 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 MIR17HGQ75NE6 70 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 RP1L1Q8IWN7 2480 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 SPAG17Q6Q759 2223 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 ZNF729A6NN14 1252 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 C12orf73Q69YU5 71 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 TMEM256Q8N2U0 113 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 DSCR8Q96T75 97 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 ATP6V0BQ99437 205 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 DLL3Q9NYJ7 618 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 MORN5Q5VZ52 161 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 MCRIP2Q9BUT9 160 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 PKIBQ9C010 78 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 IGKV2-40A0A087WW87 121 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 IGKV2D-40P01614 121 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 EFNA4P52798 201 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 SS18Q15532 418 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 TMEM91Q6ZNR0 172 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 ODAMA1E959 279 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 CD59P13987 128 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 FGF12P61328 243 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 TMEM144Q7Z5S9 345 aa9.32□□□□□ -0.92
CACNA1C-217ENST00000399641 MARCH11A6NNE9 402 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 Q0VFX4 171 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 KLHL30-AS1Q8NEE0 82 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 LAMTOR2Q9Y2Q5 125 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 IGHV4OR15-8A0A075B7B6 117 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 A0A087WW49 117 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 H0Y980 276 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 IL36BQ9NZH7 164 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 IGHG4P01861 327 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 RNF166Q96A37 237 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 NABP1Q96AH0 204 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 SS18L2Q9UHA2 77 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 F5H768 121 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 NBEAP1P0C6P0 100 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 TEX43Q6ZNM6 134 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 MAPK1IP1LQ8NDC0 245 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 TRBV9A0A0B4J1U6 114 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 CDKN1BP46527 198 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 SCAND1P57086 179 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 RASL10AQ92737 203 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 SRXN1Q9BYN0 137 aa9.31□□□□□ -0.92
CACNA1C-217ENST00000399641 SCN9AQ15858 1988 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 GAGE12BA1L429 117 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 TMEM238C9JI98 176 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 CELA3AP09093 270 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 VSIG8P0DPA2 414 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 TIAF1O95411 115 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 FAM27BQ5VT28 67 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 PLPPR1Q8TBJ4 325 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 A0A087X0K7 114 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 LYNX1G3V0Z9 82 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 CDC42EP2O14613 210 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 LYNX1P0DP58 116 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 PCM1Q15154 2024 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 A0A087WWL8 130 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 TRAV14DV4A0A0A6YYC5 116 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 NDPQ00604 133 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 RPL18AQ02543 176 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 PSG3Q16557 428 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 STPG2Q8N412 459 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 WDYHV1Q96HA8 205 aa9.3□□□□□ -0.92
CACNA1C-217ENST00000399641 FAM90A20PA6NIJ5 464 aa9.29□□□□□ -0.92
CACNA1C-217ENST00000399641 KLF5Q13887 457 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-217ENST00000399641 DKK4Q9UBT3 224 aa9.29□□□□□ -0.92
CACNA1C-217ENST00000399641 BRK1Q8WUW1 75 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms