RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 APOMO95445 188 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 AREGP15514 252 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 REG1BP48304 166 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 SPINK14Q6IE38 97 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 RBPMS2Q6ZRY4 209 aaKnown RBP7.74□□□□□ -1.17
COL28A1-201ENST00000399429 OR4F17Q8NGA8 305 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 OR52E5Q8NH55 327 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 HARBI1Q96MB7 349 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 PKIBQ9C010 78 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 PI4KAP42356 2102 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 GAGE12HA6NDE8 117 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 SPRY3O43610 288 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 CCL7P80098 99 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 TWIST1Q15672 202 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 TMEM240Q5SV17 173 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 LYRM7Q5U5X0 104 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 PRSS57Q6UWY2 283 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 GOLT1AQ6ZVE7 132 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 LHFPL4Q7Z7J7 247 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 MDP1Q86V88 176 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 PILRBQ9UKJ0 227 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 A0A1B0GUT8 65 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 NCBP2LA6PVI3 153 aaKnown RBP7.73□□□□□ -1.17
COL28A1-201ENST00000399429 RSPO1Q2MKA7 263 aaPredicted RBP7.73□□□□□ -1.17
COL28A1-201ENST00000399429 GAGE13Q4V321 117 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 MORN2Q502X0 79 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 GUSBP11Q6P575 273 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 DUSP23Q9BVJ7 150 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 C1QTNF5Q9BXJ0 243 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 TEX48A0A1B0GUV7 120 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 H7C2G1 150 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 K7EP34 96 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 PSG7Q13046 419 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 LINC00305Q7Z4B0 112 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 ODF3L1Q8IXM7 274 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 OR9G1Q8NH87 305 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 FAM222BQ8WU58 562 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 CLUHP3Q96NS8 147 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 AAMDCQ9H7C9 122 aa7.73□□□□□ -1.17
COL28A1-201ENST00000399429 MRPL16Q9NX20 251 aaKnown RBP7.73□□□□□ -1.17
COL28A1-201ENST00000399429 ORM1P02763 201 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 TTC9CQ8N5M4 171 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 ZIC4Q8N9L1 334 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 GPR82Q96P67 336 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 RABAC1Q9UI14 185 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 TP53TG3Q9ULZ0 132 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 UFC1Q9Y3C8 167 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 RNF114Q9Y508 228 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 LY96Q9Y6Y9 160 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 ANAPC1Q9H1A4 1944 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 SPINK8P0C7L1 97 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 SRFP11831 508 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 HCP5Q6MZN7 132 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 FAM53AQ6NSI3 398 aaPredicted RBP7.72□□□□□ -1.17
COL28A1-201ENST00000399429 ZNF441Q8N8Z8 693 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 OR13A1Q8NGR1 328 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 MYOZ3Q8TDC0 251 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 PLXNA2O75051 1894 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 H3BRM9 83 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 MOSP00540 346 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 IL4P05112 153 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 PRDX2P32119 198 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 TMEM42Q69YG0 159 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 CT55Q8WUE5 264 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 PRELID3AQ96N28 172 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 PRR19A6NJB7 356 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 NBEAP1P0C6P0 100 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 ASCL4Q6XD76 172 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 ZNF497Q6ZNH5 498 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 LINC00173Q6ZV60 143 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 OR1L8Q8NGR8 309 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 RPEQ96AT9 228 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 C19orf24Q9BVV8 132 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 CFHR5Q9BXR6 569 aa7.72□□□□□ -1.17
COL28A1-201ENST00000399429 TRAV3A0A0B4J244 114 aa7.71□□□□□ -1.17
COL28A1-201ENST00000399429 DNPH1O43598 174 aa7.71□□□□□ -1.17
COL28A1-201ENST00000399429 CELA3BP08861 270 aa7.71□□□□□ -1.17
COL28A1-201ENST00000399429 IGLC1P0CG04 106 aa7.71□□□□□ -1.17
COL28A1-201ENST00000399429 MBNL2Q5VZF2 373 aaKnown RBP7.71□□□□□ -1.17
COL28A1-201ENST00000399429 FAM168AQ92567 244 aa7.71□□□□□ -1.17
COL28A1-201ENST00000399429 CXXC4Q9H2H0 198 aa7.71□□□□□ -1.17
COL28A1-201ENST00000399429 C11orf1Q9H5F2 150 aa7.71□□□□□ -1.17
COL28A1-201ENST00000399429 CHCHD2Q9Y6H1 151 aaPredicted RBP7.71□□□□□ -1.17
COL28A1-201ENST00000399429 NBASA2RRP1 2371 aa7.71□□□□□ -1.17
COL28A1-201ENST00000399429 IGHV1-24A0A0C4DH33 117 aa7.71□□□□□ -1.18
COL28A1-201ENST00000399429 REG1AP05451 166 aa7.71□□□□□ -1.18
COL28A1-201ENST00000399429 CEACAM3P40198 252 aa7.71□□□□□ -1.18
COL28A1-201ENST00000399429 MNX1P50219 401 aaPredicted RBP7.71□□□□□ -1.18
COL28A1-201ENST00000399429 CD300EQ496F6 205 aaPredicted RBP7.71□□□□□ -1.18
COL28A1-201ENST00000399429 INO80CQ6PI98 192 aaPredicted RBP7.71□□□□□ -1.18
COL28A1-201ENST00000399429 OR9G4Q8NGQ1 327 aa7.71□□□□□ -1.18
COL28A1-201ENST00000399429 ZNF502Q8TBZ5 544 aa7.71□□□□□ -1.18
COL28A1-201ENST00000399429 ZNF48Q96MX3 618 aaPredicted RBP7.71□□□□□ -1.18
COL28A1-201ENST00000399429 NDFIP1Q9BT67 221 aa7.71□□□□□ -1.18
COL28A1-201ENST00000399429 LINC00473A8K010 186 aa7.71□□□□□ -1.18
COL28A1-201ENST00000399429 CD40P25942 277 aa7.71□□□□□ -1.18
COL28A1-201ENST00000399429 MC5RP33032 325 aa7.71□□□□□ -1.18
COL28A1-201ENST00000399429 SRSF7Q16629 238 aaKnown RBP eCLIP7.71□□□□□ -1.18
COL28A1-201ENST00000399429 SLC25A53Q5H9E4 307 aa7.71□□□□□ -1.18
COL28A1-201ENST00000399429 TEX29Q8N6K0 151 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms