RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 OR9G9P0C7N8 305 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 CCL2P13500 99 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 HBBP68871 147 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 RTL8BQ17RB0 113 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 WDR31Q8NA23 367 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 IGF2BP2-AS1Q96M15 143 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 USF3Q68DE3 2245 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 A1L4Q6 167 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 C9orf135Q5VTT2 229 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 FAM216AQ8WUB2 273 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 LOC400499M0QZD8 3231 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 NGFP01138 241 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 TMPRSS3P57727 454 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 ERVK-16P61578 105 aa12.36□□□□□ -0.43
CYLD-202ENST00000398568 GGTLC3B5MD39 225 aa12.35□□□□□ -0.43
CYLD-202ENST00000398568 Q6P435 159 aa12.35□□□□□ -0.43
CYLD-202ENST00000398568 FAM231DQ6ZW35 169 aa12.35□□□□□ -0.43
CYLD-202ENST00000398568 DUSP23Q9BVJ7 150 aa12.35□□□□□ -0.43
CYLD-202ENST00000398568 SRXN1Q9BYN0 137 aa12.35□□□□□ -0.43
CYLD-202ENST00000398568 FGF21Q9NSA1 209 aa12.35□□□□□ -0.43
CYLD-202ENST00000398568 IDI2-AS1Q9NZ38 188 aa12.35□□□□□ -0.43
CYLD-202ENST00000398568 LSM4Q9Y4Z0 139 aaKnown RBP12.35□□□□□ -0.43
CYLD-202ENST00000398568 TNRC6BQ9UPQ9 1833 aaKnown RBP12.35□□□□□ -0.43
CYLD-202ENST00000398568 SAMD5Q5TGI4 173 aa12.35□□□□□ -0.43
CYLD-202ENST00000398568 LRRC29Q8WV35 223 aa12.35□□□□□ -0.43
CYLD-202ENST00000398568 NABP2Q9BQ15 211 aa12.35□□□□□ -0.43
CYLD-202ENST00000398568 LY6G6EA0A0G2JKS1 128 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 COL8A2P25067 703 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 GUSBP1Q15486 140 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 MTURNQ8N3F0 131 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 ENY2Q9NPA8 101 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 U3KQA8 63 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 MED12LQ86YW9 2145 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 IGFBP2P18065 325 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 TIMM23BQ5SRD1 257 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 LINC01545Q5VT33 79 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 COLCA1Q6ZS62 124 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 FAM214BQ7L5A3 538 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 MBD6Q96DN6 1003 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 LRP4O75096 1905 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 TEX50A0A1B0GTY4 177 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 A0A1W2PQM1 296 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 BRWD1-AS2P59051 145 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 ADAMTSL5Q6ZMM2 481 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 MBNL3Q9NUK0 354 aaKnown RBP12.34□□□□□ -0.43
CYLD-202ENST00000398568 APC2O95996 2303 aa12.34□□□□□ -0.43
CYLD-202ENST00000398568 URB1O60287 2271 aaKnown RBP12.34□□□□□ -0.43
CYLD-202ENST00000398568 CHEK1O14757 476 aa12.33□□□□□ -0.43
CYLD-202ENST00000398568 DSCR4P56555 118 aaPredicted RBP12.33□□□□□ -0.43
CYLD-202ENST00000398568 EXPH5Q8NEV8 1989 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 FCGR3BO75015 233 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 FOXE3Q13461 319 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 PLXDC1Q8IUK5 500 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 MRAP2Q96G30 205 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 PKIBQ9C010 78 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 GEMIN7Q9H840 131 aaKnown RBP12.33□□□□□ -0.44
CYLD-202ENST00000398568 J3QT63 122 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 IGHV3-9P01782 118 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 CSN3P07498 182 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 RAC3P60763 192 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 CFHR1Q03591 330 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 CCDC144NLQ6NUI1 221 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 OR4X2Q8NGF9 303 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 MPC1Q9Y5U8 109 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 CACNA1GO43497 2377 aa12.33□□□□□ -0.44
CYLD-202ENST00000398568 TMEM30CPA0ZSE6 113 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 TMEM189A5PLL7 270 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 SMIM13P0DJ93 91 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 CD24P25063 80 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 LINC00205P59089 165 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 TCTEX1D4Q5JR98 221 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 OR2Z1Q8NG97 314 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 OR9G4Q8NGQ1 327 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 FAM222BQ8WU58 562 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 POM121L2Q96KW2 1035 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 LINC00479Q96M42 142 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 ZFHX4Q86UP3 3567 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 IGHV1OR21-1A0A087WYE8 117 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 VDAC2P45880 294 aaPredicted RBP12.32□□□□□ -0.44
CYLD-202ENST00000398568 ZNF137PP52743 207 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 AMMECR1Q9Y4X0 333 aaPredicted RBP12.32□□□□□ -0.44
CYLD-202ENST00000398568 LOC102723996A0A087X1L8 192 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 LINC00473A8K010 186 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 BLNKQ8WV28 456 aa12.32□□□□□ -0.44
CYLD-202ENST00000398568 PRSS46E5RG02 174 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 ZNF138P52744 262 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 CHCHD2Q9Y6H1 151 aaPredicted RBP12.31□□□□□ -0.44
CYLD-202ENST00000398568 C12orf77C9JDV5 145 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 FAM87AP0C7U9 286 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 GPR12P47775 334 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 PRR20EP86478 221 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 PRR20CP86479 221 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 PRR20DP86480 221 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 PRR20BP86481 221 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 PRR20AP86496 221 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 LTC4SQ16873 150 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 FAM53AQ6NSI3 398 aaPredicted RBP12.31□□□□□ -0.44
CYLD-202ENST00000398568 A0A096LPE4 126 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 SERTM2A0A1B0GWG4 89 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 A0A1W2PPZ6 126 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms