RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 MEF2BQ02080 365 aaPredicted RBP6.69□□□□□ -1.34
PTPRD-204ENST00000397606 TMEM78Q5T7P6 136 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 TEX38Q6PEX7 206 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 WDR83OSQ9Y284 106 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 ADAMTS20P59510 1910 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 MYO18BQ8IUG5 2567 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 ARL14EPLP0DKL9 152 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 GAMTQ14353 236 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 ZNF738Q8NE65 137 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 C8orf46Q8TAG6 207 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 CSPG4Q6UVK1 2322 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 TMEM218A2RU14 115 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 PLA2G2AP14555 144 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 HOXB4P17483 251 aaPredicted RBP6.69□□□□□ -1.34
PTPRD-204ENST00000397606 RPL29P47914 159 aaKnown RBP6.69□□□□□ -1.34
PTPRD-204ENST00000397606 C15orf32Q32M92 178 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 BSXQ3C1V8 233 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 BAGE2Q86Y30 109 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 STPG2Q8N412 459 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 LINC00862A6NCI5 91 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 SNRPCP09234 159 aaKnown RBP6.69□□□□□ -1.34
PTPRD-204ENST00000397606 SNRPD3P62318 126 aaKnown RBP6.69□□□□□ -1.34
PTPRD-204ENST00000397606 TMEM14EPQ6UXP3 125 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 USMG5Q96IX5 58 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 AGMATQ9BSE5 352 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 UFC1Q9Y3C8 167 aa6.69□□□□□ -1.34
PTPRD-204ENST00000397606 CCDC168Q8NDH2 2452 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 A0A0G2JRQ6 117 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 CLDN34H7C241 214 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 TGOLN2O43493 480 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 SRSF4Q08170 494 aaKnown RBP6.68□□□□□ -1.34
PTPRD-204ENST00000397606 Q6ZRM9 215 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 RCC1LQ96I51 464 aaKnown RBP6.68□□□□□ -1.34
PTPRD-204ENST00000397606 CLEC5AQ9NY25 188 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 ABCA1O95477 2261 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 FGF16O43320 207 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 SMIM17P0DL12 118 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 SAMD13Q5VXD3 122 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 A0A1W2PPQ1 181 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 A0A1W2PRX2 142 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 GCHFRP30047 84 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 SPSB3Q6PJ21 355 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 RNF125Q96EQ8 232 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 TMEM14BQ9NUH8 114 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 NAGKQ9UJ70 344 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 HSPB1P04792 205 aaKnown RBP6.68□□□□□ -1.34
PTPRD-204ENST00000397606 CTDSP1Q9GZU7 261 aa6.68□□□□□ -1.34
PTPRD-204ENST00000397606 PKD1L2Q7Z442 2459 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 IGHV3OR16-13A0A075B7E8 117 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 IGHV3-74A0A0B4J1X5 117 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 A0A1B0GWJ7 208 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 MEOX2P50222 304 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 PAX8Q06710 450 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 CDSNQ15517 529 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 C11orf71Q6IPW1 123 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 GPR82Q96P67 336 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 TRBV7-1A0A0A6YYK4 115 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 NBEAP1P0C6P0 100 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 SEC11CQ9BY50 192 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 CDC42EP3Q9UKI2 254 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 EPG5Q9HCE0 2579 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 ARHGAP21Q5T5U3 1957 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 FAM223BA6NKX1 122 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 B4DEV8 164 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 ZNF207O43670 478 aaKnown RBP6.67□□□□□ -1.34
PTPRD-204ENST00000397606 P01737 135 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 GATA2P23769 480 aaPredicted RBP6.67□□□□□ -1.34
PTPRD-204ENST00000397606 LOXL1Q08397 574 aaPredicted RBP6.67□□□□□ -1.34
PTPRD-204ENST00000397606 POU2AF1Q16633 256 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 FAM223AQ8IWN6 122 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 GGCTO75223 188 aaKnown RBP6.67□□□□□ -1.34
PTPRD-204ENST00000397606 AREGP15514 252 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 CTRB1P17538 263 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 CTRB2Q6GPI1 263 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 TREML4Q6UXN2 200 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 OR10G8Q8NGN5 311 aa6.67□□□□□ -1.34
PTPRD-204ENST00000397606 IGHV3-49A0A0A0MS15 119 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 A0A1W2PPI3 338 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 FHITP49789 147 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 DIAPH2-AS1Q14236 149 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 KLF17Q5JT82 389 aaPredicted RBP6.66□□□□□ -1.34
PTPRD-204ENST00000397606 SAMD10Q9BYL1 202 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 SHANK1Q9Y566 2161 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 PTPRBP23467 1997 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 SERTM2A0A1B0GWG4 89 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 ORM1P02763 201 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 RNASE2P10153 161 aaKnown RBP6.66□□□□□ -1.34
PTPRD-204ENST00000397606 PAX6P26367 422 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 PRSS57Q6UWY2 283 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 PRNTQ86SH4 94 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 ZFYVE26Q68DK2 2539 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 HIVEP2P31629 2446 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 ATP6V0E1O15342 81 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 CD99P14209 185 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 ZFP36P26651 326 aaKnown RBP6.66□□□□□ -1.34
PTPRD-204ENST00000397606 CNTFRP26992 372 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 FAM110DQ8TAY7 271 aaPredicted RBP6.66□□□□□ -1.34
PTPRD-204ENST00000397606 ANAPC16Q96DE5 110 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 NDUFA4L2Q9NRX3 87 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 DSCAMO60469 2012 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms