RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CD69Q07108 199 aa18.27■□□□□ 0.52
TSPAN4-203ENST00000397397 ETFRF1Q6IPR1 90 aa18.27■□□□□ 0.52
TSPAN4-203ENST00000397397 ZNF343Q6P1L6 599 aa18.27■□□□□ 0.52
TSPAN4-203ENST00000397397 ACSM6Q6P461 480 aa18.27■□□□□ 0.52
TSPAN4-203ENST00000397397 STX12Q86Y82 276 aa18.27■□□□□ 0.52
TSPAN4-203ENST00000397397 OR10P1Q8NGE3 313 aa18.27■□□□□ 0.52
TSPAN4-203ENST00000397397 C4orf3Q8WVX3 66 aa18.27■□□□□ 0.52
TSPAN4-203ENST00000397397 FXYD6-FXYD2A0A087WZ82 144 aa18.26■□□□□ 0.51
TSPAN4-203ENST00000397397 TRBV7-1A0A0A6YYK4 115 aa18.26■□□□□ 0.51
TSPAN4-203ENST00000397397 LGALS1P09382 135 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-203ENST00000397397 GPX4P36969 197 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-203ENST00000397397 MFAP4P55083 255 aa18.26■□□□□ 0.51
TSPAN4-203ENST00000397397 SLC16A13Q7RTY0 426 aa18.26■□□□□ 0.51
TSPAN4-203ENST00000397397 ZNF502Q8TBZ5 544 aa18.26■□□□□ 0.51
TSPAN4-203ENST00000397397 ANKRD34BA5PLL1 514 aa18.25■□□□□ 0.51
TSPAN4-203ENST00000397397 ADARB2-AS1A8MUL3 147 aa18.25■□□□□ 0.51
TSPAN4-203ENST00000397397 PRSS46E5RG02 174 aa18.25■□□□□ 0.51
TSPAN4-203ENST00000397397 SULT1A1P50225 295 aa18.25■□□□□ 0.51
TSPAN4-203ENST00000397397 EWSR1Q01844 656 aaKnown RBP eCLIP18.25■□□□□ 0.511e-6■■■■□ 25.6
TSPAN4-203ENST00000397397 ARL16Q0P5N6 197 aa18.25■□□□□ 0.51
TSPAN4-203ENST00000397397 SHISA2Q6UWI4 295 aa18.25■□□□□ 0.51
TSPAN4-203ENST00000397397 HAPLN4Q86UW8 402 aa18.25■□□□□ 0.51
TSPAN4-203ENST00000397397 CCDC140Q96MF4 163 aa18.25■□□□□ 0.51
TSPAN4-203ENST00000397397 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-203ENST00000397397 I3L521 148 aa18.24■□□□□ 0.51
TSPAN4-203ENST00000397397 RPL12P30050 165 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-203ENST00000397397 Q56UQ5 140 aa18.24■□□□□ 0.51
TSPAN4-203ENST00000397397 CLEC19AQ6UXS0 136 aa18.24■□□□□ 0.51
TSPAN4-203ENST00000397397 C8orf86Q6ZUL3 223 aa18.24■□□□□ 0.51
TSPAN4-203ENST00000397397 TCTE3Q8IZS6 198 aa18.24■□□□□ 0.51
TSPAN4-203ENST00000397397 TMEM217Q8N7C4 229 aa18.24■□□□□ 0.51
TSPAN4-203ENST00000397397 UBAC2Q8NBM4 344 aa18.24■□□□□ 0.51
TSPAN4-203ENST00000397397 CACNG8Q8WXS5 425 aa18.24■□□□□ 0.51
TSPAN4-203ENST00000397397 SLC35E1Q96K37 410 aa18.24■□□□□ 0.51
TSPAN4-203ENST00000397397 MRPL36Q9P0J6 103 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-203ENST00000397397 SCAF4O95104 1147 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 NUP62P37198 522 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 ACOT7LQ6ZUV0 252 aa18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 ZC4H2Q9NQZ6 224 aa18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 PEF1Q9UBV8 284 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 GPR183P32249 361 aa18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 NPBWR1P48145 328 aa18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 RUNX1Q01196 453 aa18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 NHLH2Q02577 135 aa18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 SLC38A11Q08AI6 406 aa18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 DEFB136Q30KP8 78 aa18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 FAM209BQ5JX69 171 aa18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 ZNF546Q86UE3 836 aa18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 ACY3Q96HD9 319 aa18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 TXN2Q99757 166 aa18.23■□□□□ 0.51
TSPAN4-203ENST00000397397 TENM1Q9UKZ4 2725 aa18.22■□□□□ 0.51
TSPAN4-203ENST00000397397 OR2T8A6NH00 312 aa18.22■□□□□ 0.51
TSPAN4-203ENST00000397397 TRBV12-3P01733 135 aa18.22■□□□□ 0.51
TSPAN4-203ENST00000397397 CLEC3BP05452 202 aa18.22■□□□□ 0.51
TSPAN4-203ENST00000397397 RND2P52198 227 aa18.22■□□□□ 0.51
TSPAN4-203ENST00000397397 HBG1P69891 147 aa18.22■□□□□ 0.51
TSPAN4-203ENST00000397397 HBG2P69892 147 aa18.22■□□□□ 0.51
TSPAN4-203ENST00000397397 DLK1P80370 383 aa18.22■□□□□ 0.51
TSPAN4-203ENST00000397397 BAXQ07812 192 aa18.22■□□□□ 0.51
TSPAN4-203ENST00000397397 GAMTQ14353 236 aa18.22■□□□□ 0.51
TSPAN4-203ENST00000397397 OR4X1Q8NH49 305 aa18.22■□□□□ 0.51
TSPAN4-203ENST00000397397 F8W735 103 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-203ENST00000397397 GNG7O60262 68 aa18.21■□□□□ 0.51
TSPAN4-203ENST00000397397 FCGR2BP31994 310 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-203ENST00000397397 CD300CQ08708 224 aa18.21■□□□□ 0.51
TSPAN4-203ENST00000397397 LILRB2Q8N423 598 aa18.21■□□□□ 0.51
TSPAN4-203ENST00000397397 INO80EQ8NBZ0 244 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-203ENST00000397397 NPIPB3Q92617 1050 aa18.21■□□□□ 0.51
TSPAN4-203ENST00000397397 BSCL2Q96G97 398 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-203ENST00000397397 ATP6V0BQ99437 205 aa18.21■□□□□ 0.51
TSPAN4-203ENST00000397397 GAR1Q9NY12 217 aaKnown RBP18.21■□□□□ 0.51
TSPAN4-203ENST00000397397 HSPB11Q9Y547 144 aa18.21■□□□□ 0.51
TSPAN4-203ENST00000397397 SMCO3A2RU48 225 aa18.2■□□□□ 0.5
TSPAN4-203ENST00000397397 PPP5D1E7EU14 171 aa18.2■□□□□ 0.5
TSPAN4-203ENST00000397397 CLN5O75503 358 aa18.2■□□□□ 0.5
TSPAN4-203ENST00000397397 HSPB1P04792 205 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-203ENST00000397397 S100A11P31949 105 aa18.2■□□□□ 0.5
TSPAN4-203ENST00000397397 ARL3P36405 182 aa18.2■□□□□ 0.5
TSPAN4-203ENST00000397397 TMEM116Q8NCL8 245 aa18.2■□□□□ 0.5
TSPAN4-203ENST00000397397 OR1S2Q8NGQ3 325 aa18.2■□□□□ 0.5
TSPAN4-203ENST00000397397 OR1N2Q8NGR9 330 aa18.2■□□□□ 0.5
TSPAN4-203ENST00000397397 NEURL2Q9BR09 285 aa18.2■□□□□ 0.5
TSPAN4-203ENST00000397397 GGACTQ9BVM4 153 aa18.2■□□□□ 0.5
TSPAN4-203ENST00000397397 TNFSF18Q9UNG2 199 aa18.2■□□□□ 0.5
TSPAN4-203ENST00000397397 IGHV4OR15-8A0A075B7B6 117 aa18.19■□□□□ 0.5
TSPAN4-203ENST00000397397 A0A087WW49 117 aa18.19■□□□□ 0.5
TSPAN4-203ENST00000397397 AKR1C1Q04828 323 aa18.19■□□□□ 0.5
TSPAN4-203ENST00000397397 OR11H1Q8NG94 326 aa18.19■□□□□ 0.5
TSPAN4-203ENST00000397397 OR11H4Q8NGC9 324 aa18.19■□□□□ 0.5
TSPAN4-203ENST00000397397 DPF1Q92782 380 aa18.19■□□□□ 0.5
TSPAN4-203ENST00000397397 RAX2Q96IS3 184 aa18.19■□□□□ 0.5
TSPAN4-203ENST00000397397 AQP10Q96PS8 301 aa18.19■□□□□ 0.5
TSPAN4-203ENST00000397397 DUX3Q96PT4 197 aa18.19■□□□□ 0.5
TSPAN4-203ENST00000397397 TGOLN2O43493 480 aa18.18■□□□□ 0.5
TSPAN4-203ENST00000397397 OR5C1Q8NGR4 320 aa18.18■□□□□ 0.5
TSPAN4-203ENST00000397397 FNDC10F2Z333 226 aa18.17■□□□□ 0.5
TSPAN4-203ENST00000397397 LINC01619G3V211 115 aa18.17■□□□□ 0.5
TSPAN4-203ENST00000397397 BMPR1BO00238 502 aa18.17■□□□□ 0.5
TSPAN4-203ENST00000397397 ARPC5O15511 151 aa18.17■□□□□ 0.5
TSPAN4-203ENST00000397397 ATP6V1FQ16864 119 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms