RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 PMCHL1Q16048 86 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 MRPL54Q6P161 138 aaKnown RBP10.83□□□□□ -0.68
TRIM40-207ENST00000396581 STPG4Q8N801 248 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 LEAP2Q969E1 77 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 FAM122AQ96E09 287 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 LAMTOR2Q9Y2Q5 125 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 TEX50A0A1B0GTY4 177 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 INS-IGF2F8WCM5 200 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 RNASE2P10153 161 aaKnown RBP10.83□□□□□ -0.68
TRIM40-207ENST00000396581 UCNP55089 124 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 TCL1AP56279 114 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 CD69Q07108 199 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 SLAQ13239 276 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 DMRTA1Q5VZB9 504 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 C11orf42Q8N5U0 333 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 OR5B3Q8NH48 314 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 ORAOV1Q8WV07 137 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 ZNF714Q96N38 554 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 SLC25A2Q9BXI2 301 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 SLC35D1Q9NTN3 355 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 BET1LQ9NYM9 111 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 MRPS16Q9Y3D3 137 aaKnown RBP10.83□□□□□ -0.68
TRIM40-207ENST00000396581 FAM215AQ9Y5M1 114 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 DSPP15924 2871 aaKnown RBP10.82□□□□□ -0.68
TRIM40-207ENST00000396581 C20orf202A1L168 122 aa10.82□□□□□ -0.68
TRIM40-207ENST00000396581 SIAH2O43255 324 aa10.82□□□□□ -0.68
TRIM40-207ENST00000396581 OR2J3O76001 311 aa10.82□□□□□ -0.68
TRIM40-207ENST00000396581 USF1P22415 310 aaPredicted RBP10.82□□□□□ -0.68
TRIM40-207ENST00000396581 GATA2P23769 480 aaPredicted RBP10.82□□□□□ -0.68
TRIM40-207ENST00000396581 TMEM30BQ3MIR4 351 aa10.82□□□□□ -0.68
TRIM40-207ENST00000396581 SPRNQ5BIV9 151 aa10.82□□□□□ -0.68
TRIM40-207ENST00000396581 Q8NA96 180 aa10.82□□□□□ -0.68
TRIM40-207ENST00000396581 CACNG8Q8WXS5 425 aa10.82□□□□□ -0.68
TRIM40-207ENST00000396581 ZNF331Q9NQX6 463 aaPredicted RBP10.82□□□□□ -0.68
TRIM40-207ENST00000396581 ZNF71Q9NQZ8 489 aaPredicted RBP10.82□□□□□ -0.68
TRIM40-207ENST00000396581 SPTA1P02549 2419 aa10.82□□□□□ -0.68
TRIM40-207ENST00000396581 NCOR2Q9Y618 2525 aa10.82□□□□□ -0.68
TRIM40-207ENST00000396581 YLPM1P49750 1951 aaKnown RBP10.82□□□□□ -0.68
TRIM40-207ENST00000396581 SRRM4A7MD48 611 aaKnown RBP10.81□□□□□ -0.68
TRIM40-207ENST00000396581 HNRNPA3P51991 378 aaKnown RBP10.81□□□□□ -0.68
TRIM40-207ENST00000396581 Q6ZN92 141 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 LYG1Q8N1E2 194 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 OR9G1Q8NH87 305 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 FAM168AQ92567 244 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 OR2V2Q96R30 315 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 CLEC7AQ9BXN2 247 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 DNAJC4Q9NNZ3 241 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 CT45A6P0DMU7 189 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 CT45A5P0DMU8 189 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 CT45A7P0DMV0 189 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 MGST1P10620 155 aaKnown RBP10.81□□□□□ -0.68
TRIM40-207ENST00000396581 GATA4P43694 442 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 FAM19A2Q8N3H0 131 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 BORCS7Q96B45 105 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 GRAMD2BQ96HH9 432 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 TXN2Q99757 166 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 HINT2Q9BX68 163 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 SLC25A15Q9Y619 301 aa10.81□□□□□ -0.68
TRIM40-207ENST00000396581 IGHV2-26A0A0B4J1V2 119 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 GDF5OSQ5U4N7 250 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 MORN5Q5VZ52 161 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 SLC25A48Q6ZT89 311 aaKnown RBP10.8□□□□□ -0.68
TRIM40-207ENST00000396581 MOGAT3Q86VF5 341 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 FAM57AQ8TBR7 257 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 C7orf69Q9H7B7 122 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 GCM1Q9NP62 436 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 RAXQ9Y2V3 346 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 CA1P00915 261 aaPredicted RBP10.8□□□□□ -0.68
TRIM40-207ENST00000396581 IGKV1-16P04430 117 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 TSPOP30536 169 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 TNXAQ16473 311 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 C1orf185Q5T7R7 199 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 STUMQ69YW2 141 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 OR8B3Q8NGG8 313 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 OR8B2Q96RD0 313 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 WNT10AQ9GZT5 417 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 SERTAD4Q9NUC0 356 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 PROCRQ9UNN8 238 aa10.8□□□□□ -0.68
TRIM40-207ENST00000396581 CHD8Q9HCK8 2581 aa10.79□□□□□ -0.68
TRIM40-207ENST00000396581 TOMM40O96008 361 aa10.79□□□□□ -0.68
TRIM40-207ENST00000396581 MLANAQ16655 118 aa10.79□□□□□ -0.68
TRIM40-207ENST00000396581 ZNF329Q86UD4 541 aa10.79□□□□□ -0.68
TRIM40-207ENST00000396581 NUP35Q8NFH5 326 aa10.79□□□□□ -0.68
TRIM40-207ENST00000396581 ALKBH7Q9BT30 221 aaPredicted RBP10.79□□□□□ -0.68
TRIM40-207ENST00000396581 CHRDL1Q9BU40 450 aa10.79□□□□□ -0.68
TRIM40-207ENST00000396581 SAP30LQ9HAJ7 183 aa10.79□□□□□ -0.68
TRIM40-207ENST00000396581 NDUFA4L2Q9NRX3 87 aa10.79□□□□□ -0.68
TRIM40-207ENST00000396581 AMMECR1Q9Y4X0 333 aaPredicted RBP10.79□□□□□ -0.68
TRIM40-207ENST00000396581 DSCAML1Q8TD84 2053 aa10.79□□□□□ -0.68
TRIM40-207ENST00000396581 IGLV3-9A0A075B6K5 115 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 TRAV9-2A0A087WT02 112 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 A0A1B0GXF2 115 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 FAM181BA6NEQ2 426 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 C2orf70A6NJV1 201 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 H0YJW9 148 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 FSTL3O95633 263 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 SAA1P0DJI8 122 aaPredicted RBP10.78□□□□□ -0.68
TRIM40-207ENST00000396581 CEACAM8P31997 349 aaPredicted RBP10.78□□□□□ -0.68
TRIM40-207ENST00000396581 MYCNOSP40205 109 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 UBE2L3P68036 154 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms