RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 PYYP10082 97 aa12.71□□□□□ -0.37
HOXA3-202ENST00000396352 TNFSF4P23510 183 aa12.71□□□□□ -0.37
HOXA3-202ENST00000396352 TMEM177Q53S58 311 aa12.71□□□□□ -0.37
HOXA3-202ENST00000396352 C1orf185Q5T7R7 199 aa12.71□□□□□ -0.37
HOXA3-202ENST00000396352 FNDC4Q9H6D8 234 aaPredicted RBP12.71□□□□□ -0.37
HOXA3-202ENST00000396352 SERTAD4Q9NUC0 356 aa12.71□□□□□ -0.37
HOXA3-202ENST00000396352 CD40P25942 277 aa12.71□□□□□ -0.38
HOXA3-202ENST00000396352 AMTP48728 403 aa12.71□□□□□ -0.38
HOXA3-202ENST00000396352 WT1-ASQ06250 92 aa12.71□□□□□ -0.38
HOXA3-202ENST00000396352 FAM27E3Q08E93 113 aa12.71□□□□□ -0.38
HOXA3-202ENST00000396352 ZNF253O75346 499 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 FSTL3O95633 263 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 APOA2P02652 100 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 CCL3L1P16619 93 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 CTRLP40313 264 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 PATE2Q6UY27 113 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 MBD6Q96DN6 1003 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 RNF2Q99496 336 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 GAL3ST2Q9H3Q3 398 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 NAV3Q8IVL0 2385 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 DIRC3C9JPN6 131 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 RPLP1P05386 114 aaKnown RBP12.7□□□□□ -0.38
HOXA3-202ENST00000396352 REG1BP48304 166 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 ZNF329Q86UD4 541 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 ZNF355PQ9NSJ1 428 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 IGKV1D-37A0A075B6S9 117 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 ZNF324O75467 553 aaPredicted RBP12.7□□□□□ -0.38
HOXA3-202ENST00000396352 PMCHP20382 165 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 CCL8P80075 99 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 ERHP84090 104 aaKnown RBP12.7□□□□□ -0.38
HOXA3-202ENST00000396352 SLAQ13239 276 aa12.7□□□□□ -0.38
HOXA3-202ENST00000396352 SSBP3Q9BWW4 388 aaPredicted RBP12.7□□□□□ -0.38
HOXA3-202ENST00000396352 AMMECR1Q9Y4X0 333 aaPredicted RBP12.7□□□□□ -0.38
HOXA3-202ENST00000396352 ARFGEF3Q5TH69 2177 aa12.69□□□□□ -0.38
HOXA3-202ENST00000396352 A6NNC1 897 aa12.69□□□□□ -0.38
HOXA3-202ENST00000396352 NIT1Q86X76 327 aa12.69□□□□□ -0.38
HOXA3-202ENST00000396352 OR4B1Q8NGF8 309 aa12.69□□□□□ -0.38
HOXA3-202ENST00000396352 TMEM167AQ8TBQ9 72 aa12.69□□□□□ -0.38
HOXA3-202ENST00000396352 APCSP02743 223 aa12.69□□□□□ -0.38
HOXA3-202ENST00000396352 ZNF25P17030 456 aaPredicted RBP12.69□□□□□ -0.38
HOXA3-202ENST00000396352 USF1P22415 310 aaPredicted RBP12.69□□□□□ -0.38
HOXA3-202ENST00000396352 CASP6P55212 293 aa12.69□□□□□ -0.38
HOXA3-202ENST00000396352 DIAPH2-AS1Q14236 149 aa12.69□□□□□ -0.38
HOXA3-202ENST00000396352 C10orf55Q5SWW7 151 aa12.69□□□□□ -0.38
HOXA3-202ENST00000396352 WIPF2Q8TF74 440 aaPredicted RBP12.69□□□□□ -0.38
HOXA3-202ENST00000396352 FLYWCH2Q96CP2 140 aaKnown RBP12.69□□□□□ -0.38
HOXA3-202ENST00000396352 NKX6-3A6NJ46 265 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 COX7A2P2O60397 106 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 MEF2CQ06413 473 aaPredicted RBP12.68□□□□□ -0.38
HOXA3-202ENST00000396352 FAM231DQ6ZW35 169 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 NUP37Q8NFH4 326 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 MRPL36Q9P0J6 103 aaKnown RBP12.68□□□□□ -0.38
HOXA3-202ENST00000396352 C10orf113Q5VZT2 155 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 TMEM200BQ69YZ2 307 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 IGFL3Q6UXB1 125 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 TSKUQ8WUA8 353 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 FXYD5Q96DB9 178 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 PAXXQ9BUH6 204 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 ZNF430Q9H8G1 570 aaPredicted RBP12.68□□□□□ -0.38
HOXA3-202ENST00000396352 A0A1W2PN81 502 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 TCRBV4S1A1TA0A5B7 111 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 PEX7O00628 323 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 IGLV2-23P01705 113 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 IGHV3-48P01763 117 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 NPIPB3Q92617 1050 aa12.68□□□□□ -0.38
HOXA3-202ENST00000396352 TRAV34A0A0B4J273 112 aa12.67□□□□□ -0.38
HOXA3-202ENST00000396352 CEACAM8P31997 349 aaPredicted RBP12.67□□□□□ -0.38
HOXA3-202ENST00000396352 GDF5OSQ5U4N7 250 aa12.67□□□□□ -0.38
HOXA3-202ENST00000396352 C18orf32Q8TCD1 76 aa12.67□□□□□ -0.38
HOXA3-202ENST00000396352 REG1AP05451 166 aa12.67□□□□□ -0.38
HOXA3-202ENST00000396352 ZCCHC24Q8N2G6 241 aaKnown RBP12.67□□□□□ -0.38
HOXA3-202ENST00000396352 THAP8Q8NA92 274 aa12.67□□□□□ -0.38
HOXA3-202ENST00000396352 OR4C13Q8NGP0 309 aa12.67□□□□□ -0.38
HOXA3-202ENST00000396352 OR4A5Q8NH83 315 aa12.67□□□□□ -0.38
HOXA3-202ENST00000396352 TMEM208Q9BTX3 173 aa12.67□□□□□ -0.38
HOXA3-202ENST00000396352 C7orf69Q9H7B7 122 aa12.67□□□□□ -0.38
HOXA3-202ENST00000396352 C3orf79P0CE67 100 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 MYCNOSP40205 109 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 RASL11AQ6T310 242 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 FAM19A2Q8N3H0 131 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 OR1L4Q8NGR5 311 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 ZNF841Q6ZN19 808 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 PDPNQ86YL7 162 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 NUP35Q8NFH5 326 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 NUDT10Q8NFP7 164 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 NUDT11Q96G61 164 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 ZNF331Q9NQX6 463 aaPredicted RBP12.66□□□□□ -0.38
HOXA3-202ENST00000396352 SPATA45Q537H7 98 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 RUSC1-AS1Q66K80 236 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 SPACA3Q8IXA5 215 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 TMEM68Q96MH6 324 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 LPAR2Q9HBW0 351 aa12.66□□□□□ -0.38
HOXA3-202ENST00000396352 MRPL27Q9P0M9 148 aaKnown RBP12.66□□□□□ -0.38
HOXA3-202ENST00000396352 MGAQ8IWI9 3026 aa12.65□□□□□ -0.38
HOXA3-202ENST00000396352 PRRX1P54821 245 aa12.65□□□□□ -0.38
HOXA3-202ENST00000396352 BPIFB3P59826 476 aa12.65□□□□□ -0.38
HOXA3-202ENST00000396352 Q6ZS92 163 aa12.65□□□□□ -0.38
HOXA3-202ENST00000396352 ST6GALNAC6Q969X2 333 aa12.65□□□□□ -0.38
HOXA3-202ENST00000396352 GRAMD2BQ96HH9 432 aa12.65□□□□□ -0.38
HOXA3-202ENST00000396352 SSUH2Q9Y2M2 353 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms