RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PVRIGQ6DKI7 326 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 ACSM6Q6P461 480 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 DTD1Q8TEA8 209 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 SMIM8Q96KF7 97 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 GPR61Q9BZJ8 451 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 MAGT1Q9H0U3 335 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 HIPK2Q9H2X6 1198 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 C11orf1Q9H5F2 150 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 HEYLQ9NQ87 328 aaPredicted RBP12.65□□□□□ -0.38
CXCL1-201ENST00000395761 RCL1Q9Y2P8 373 aaKnown RBP12.65□□□□□ -0.38
CXCL1-201ENST00000395761 DNAH3Q8TD57 4116 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 F8W735 103 aaPredicted RBP12.64□□□□□ -0.39
CXCL1-201ENST00000395761 WRBO00258 174 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 SAP30O75446 220 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 MPC2O95563 127 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 SCGB1D2O95969 90 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 MT-CO2P00403 227 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 RLN2P04090 185 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 FGL1Q08830 312 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 EGFEM1PQ0D2K5 195 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 BSXQ3C1V8 233 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 IL34Q6ZMJ4 242 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 PINX1Q96BK5 328 aaKnown RBP12.64□□□□□ -0.39
CXCL1-201ENST00000395761 ST6GAL2Q96JF0 529 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 RNF126Q9BV68 326 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 C21orf62Q9NYP8 219 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 U3KQ87 197 aa12.64□□□□□ -0.39
CXCL1-201ENST00000395761 OR2T8A6NH00 312 aa12.63□□□□□ -0.39
CXCL1-201ENST00000395761 H0YIZ8 118 aa12.63□□□□□ -0.39
CXCL1-201ENST00000395761 DEDDO75618 318 aa12.63□□□□□ -0.39
CXCL1-201ENST00000395761 CCNKO75909 580 aa12.63□□□□□ -0.39
CXCL1-201ENST00000395761 LYL1P12980 280 aa12.63□□□□□ -0.39
CXCL1-201ENST00000395761 SUB1P53999 127 aaKnown RBP eCLIP12.63□□□□□ -0.39
CXCL1-201ENST00000395761 PAX9P55771 341 aa12.63□□□□□ -0.39
CXCL1-201ENST00000395761 OR9G4Q8NGQ1 327 aa12.63□□□□□ -0.39
CXCL1-201ENST00000395761 LSM5Q9Y4Y9 91 aaKnown RBP12.63□□□□□ -0.39
CXCL1-201ENST00000395761 IGHV3-35A0A0C4DH35 117 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 TMEM50AO95807 157 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 PET100P0DJ07 73 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 PVALBP20472 110 aaPredicted RBP12.62□□□□□ -0.39
CXCL1-201ENST00000395761 HTR2BP41595 481 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 S100A10P60903 97 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 RPP30P78346 268 aaKnown RBP12.62□□□□□ -0.39
CXCL1-201ENST00000395761 MLANAQ16655 118 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 C2orf83Q53S99 150 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 Q56UQ5 140 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 PRSS54Q6PEW0 395 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 HAPLN4Q86UW8 402 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 GPHB5Q86YW7 130 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 UBAC2Q8NBM4 344 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 TMEM170AQ8WVE7 144 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 CHRDL1Q9BU40 450 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 ELOVL1Q9BW60 279 aa12.62□□□□□ -0.39
CXCL1-201ENST00000395761 AURKAIP1Q9NWT8 199 aaPredicted RBP12.62□□□□□ -0.39
CXCL1-201ENST00000395761 TRAV14DV4A0A0A6YYC5 116 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 E5RGE8 158 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 TGOLN2O43493 480 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 SSSCA1O60232 199 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 TSC22D2O75157 780 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 CSN3P07498 182 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 IAPPP10997 89 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 SLC25A4P12235 298 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 ADMP35318 185 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 INSL3P51460 131 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 LRRC37A5PQ49AS3 106 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 Q5BKY6 102 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 NOXA1Q86UR1 476 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 TCTE3Q8IZS6 198 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 OR2T35Q8NGX2 323 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 OR4C12Q96R67 309 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 FNDC4Q9H6D8 234 aaPredicted RBP12.61□□□□□ -0.39
CXCL1-201ENST00000395761 PSENENQ9NZ42 101 aa12.61□□□□□ -0.39
CXCL1-201ENST00000395761 G3V3Q6 166 aa12.6□□□□□ -0.39
CXCL1-201ENST00000395761 L7N2F9 121 aa12.6□□□□□ -0.39
CXCL1-201ENST00000395761 CTSGP08311 255 aa12.6□□□□□ -0.39
CXCL1-201ENST00000395761 EDN2P20800 178 aa12.6□□□□□ -0.39
CXCL1-201ENST00000395761 MFAP4P55083 255 aa12.6□□□□□ -0.39
CXCL1-201ENST00000395761 VAMP2P63027 116 aa12.6□□□□□ -0.39
CXCL1-201ENST00000395761 ADAMTSL5Q6ZMM2 481 aa12.6□□□□□ -0.39
CXCL1-201ENST00000395761 AKAP14Q86UN6 197 aa12.6□□□□□ -0.39
CXCL1-201ENST00000395761 SLC24A4Q8NFF2 622 aa12.6□□□□□ -0.39
CXCL1-201ENST00000395761 THAP6Q8TBB0 222 aa12.6□□□□□ -0.39
CXCL1-201ENST00000395761 BSCL2Q96G97 398 aaPredicted RBP12.6□□□□□ -0.39
CXCL1-201ENST00000395761 NEURL2Q9BR09 285 aa12.6□□□□□ -0.39
CXCL1-201ENST00000395761 OR5AC2Q9NZP5 309 aa12.6□□□□□ -0.39
CXCL1-201ENST00000395761 MRPL36Q9P0J6 103 aaKnown RBP12.6□□□□□ -0.39
CXCL1-201ENST00000395761 ZNF320A2RRD8 509 aa12.59□□□□□ -0.39
CXCL1-201ENST00000395761 C15orf62A8K5M9 175 aa12.59□□□□□ -0.39
CXCL1-201ENST00000395761 LGALS9O00182 355 aa12.59□□□□□ -0.39
CXCL1-201ENST00000395761 IFNA10P01566 189 aa12.59□□□□□ -0.39
CXCL1-201ENST00000395761 NPY1RP25929 384 aa12.59□□□□□ -0.39
CXCL1-201ENST00000395761 P2RY1P47900 373 aa12.59□□□□□ -0.39
CXCL1-201ENST00000395761 FAM106AQ4KMX7 169 aa12.59□□□□□ -0.39
CXCL1-201ENST00000395761 TMEM14EPQ6UXP3 125 aa12.59□□□□□ -0.39
CXCL1-201ENST00000395761 UNQ9165/PRO28630Q6UXU0 137 aa12.59□□□□□ -0.39
CXCL1-201ENST00000395761 ZNF414Q96IQ9 312 aa12.59□□□□□ -0.39
CXCL1-201ENST00000395761 ATP6V0BQ99437 205 aa12.59□□□□□ -0.39
CXCL1-201ENST00000395761 STRAPQ9Y3F4 350 aaKnown RBP12.59□□□□□ -0.39
CXCL1-201ENST00000395761 WI2-2373I1.2A0A1W2PRP0 233 aa12.58□□□□□ -0.4
CXCL1-201ENST00000395761 CORTO00230 105 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms