RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 SMKR1H3BMG3 65 aa10.24□□□□□ -0.77
SIN3A-202ENST00000394947 EXOC3-AS1Q8N2X6 119 aa10.24□□□□□ -0.77
SIN3A-202ENST00000394947 ZNF837Q96EG3 531 aaPredicted RBP10.24□□□□□ -0.77
SIN3A-202ENST00000394947 PDCD11Q14690 1871 aaKnown RBP10.24□□□□□ -0.77
SIN3A-202ENST00000394947 A0A087X0K7 114 aa10.24□□□□□ -0.77
SIN3A-202ENST00000394947 GZMMP51124 257 aa10.24□□□□□ -0.77
SIN3A-202ENST00000394947 TPRP12270 2363 aaKnown RBP10.24□□□□□ -0.77
SIN3A-202ENST00000394947 FABP5P3A8MUU1 101 aa10.24□□□□□ -0.77
SIN3A-202ENST00000394947 FAM90A26D6RGX4 464 aa10.24□□□□□ -0.77
SIN3A-202ENST00000394947 TMEM54Q969K7 222 aa10.24□□□□□ -0.77
SIN3A-202ENST00000394947 ABHD17AQ96GS6 310 aa10.24□□□□□ -0.77
SIN3A-202ENST00000394947 PRDM13Q9H4Q3 707 aa10.24□□□□□ -0.77
SIN3A-202ENST00000394947 TRAV12-1A0A0B4J245 112 aa10.23□□□□□ -0.77
SIN3A-202ENST00000394947 NDUFS5O43920 106 aa10.23□□□□□ -0.77
SIN3A-202ENST00000394947 NHLRC3Q5JS37 347 aa10.23□□□□□ -0.77
SIN3A-202ENST00000394947 Q71RC1 249 aaPredicted RBP10.23□□□□□ -0.77
SIN3A-202ENST00000394947 SRP19P09132 144 aaKnown RBP10.23□□□□□ -0.77
SIN3A-202ENST00000394947 RPL23P62829 140 aaKnown RBP10.23□□□□□ -0.77
SIN3A-202ENST00000394947 ZNF876PQ49A33 203 aa10.23□□□□□ -0.77
SIN3A-202ENST00000394947 SIGLEC15Q6ZMC9 328 aa10.23□□□□□ -0.77
SIN3A-202ENST00000394947 ATP5L2Q7Z4Y8 100 aa10.23□□□□□ -0.77
SIN3A-202ENST00000394947 RPUSD1Q9UJJ7 312 aaKnown RBP10.23□□□□□ -0.77
SIN3A-202ENST00000394947 SVILO95425 2214 aa10.23□□□□□ -0.77
SIN3A-202ENST00000394947 RALGAPA1Q6GYQ0 2036 aa10.23□□□□□ -0.77
SIN3A-202ENST00000394947 TRAV25A0A0B4J276 109 aa10.23□□□□□ -0.77
SIN3A-202ENST00000394947 RS1O15537 224 aa10.23□□□□□ -0.77
SIN3A-202ENST00000394947 C2orf82Q6UX34 121 aa10.23□□□□□ -0.77
SIN3A-202ENST00000394947 A0A087WWL8 130 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 LGALS1P09382 135 aaKnown RBP10.22□□□□□ -0.77
SIN3A-202ENST00000394947 HOXD3P31249 432 aaPredicted RBP10.22□□□□□ -0.77
SIN3A-202ENST00000394947 C1orf159Q96HA4 380 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 SLC25A39Q9BZJ4 359 aaPredicted RBP10.22□□□□□ -0.77
SIN3A-202ENST00000394947 AKAP11Q9UKA4 1901 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 IGHV1-2P23083 117 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 GGTLC1Q9BX51 225 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 GAGE2BQ13066 116 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 PRADC1Q9BSG0 188 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 VSIRQ9H7M9 311 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 CGB7P0DN87 165 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 TRBV5-7A0A0A0MS05 114 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 IGHV3-16A0A0C4DH30 117 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 DEFB130BP0DP73 79 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 DEFB130AP0DP74 79 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 OTORQ9NRC9 128 aa10.22□□□□□ -0.77
SIN3A-202ENST00000394947 F8VVB4 439 aa10.21□□□□□ -0.77
SIN3A-202ENST00000394947 F8VWA3 439 aa10.21□□□□□ -0.77
SIN3A-202ENST00000394947 MLNRO43193 412 aa10.21□□□□□ -0.77
SIN3A-202ENST00000394947 CA7P43166 264 aa10.21□□□□□ -0.77
SIN3A-202ENST00000394947 SPXQ9BT56 116 aa10.21□□□□□ -0.77
SIN3A-202ENST00000394947 NBR2O15453 112 aa10.21□□□□□ -0.77
SIN3A-202ENST00000394947 FCN3O75636 299 aa10.21□□□□□ -0.77
SIN3A-202ENST00000394947 BRD3OSQ6XYD6 125 aa10.21□□□□□ -0.77
SIN3A-202ENST00000394947 SLC25A28Q96A46 364 aa10.21□□□□□ -0.78
SIN3A-202ENST00000394947 PSG8Q9UQ74 426 aa10.21□□□□□ -0.78
SIN3A-202ENST00000394947 IGHV2OR16-5A0A0B4J2B6 119 aa10.21□□□□□ -0.78
SIN3A-202ENST00000394947 KBTBD11-OT1A0A1B0GTJ5 212 aa10.21□□□□□ -0.78
SIN3A-202ENST00000394947 D6R8Y8 96 aa10.21□□□□□ -0.78
SIN3A-202ENST00000394947 IFNL4K9M1U5 179 aa10.21□□□□□ -0.78
SIN3A-202ENST00000394947 CIARTQ8N365 385 aaPredicted RBP10.21□□□□□ -0.78
SIN3A-202ENST00000394947 ZIC4Q8N9L1 334 aa10.21□□□□□ -0.78
SIN3A-202ENST00000394947 Q8TAT8 98 aa10.21□□□□□ -0.78
SIN3A-202ENST00000394947 RTBDNQ9BSG5 229 aaPredicted RBP10.21□□□□□ -0.78
SIN3A-202ENST00000394947 ZNF138P52744 262 aa10.21□□□□□ -0.78
SIN3A-202ENST00000394947 C6orf226Q5I0X4 101 aa10.21□□□□□ -0.78
SIN3A-202ENST00000394947 PLPPR1Q8TBJ4 325 aa10.21□□□□□ -0.78
SIN3A-202ENST00000394947 EPOPA6NHQ4 379 aa10.2□□□□□ -0.78
SIN3A-202ENST00000394947 RNF125Q96EQ8 232 aa10.2□□□□□ -0.78
SIN3A-202ENST00000394947 A0A0G2JK05 382 aa10.2□□□□□ -0.78
SIN3A-202ENST00000394947 LHBP01229 141 aa10.2□□□□□ -0.78
SIN3A-202ENST00000394947 DIDO1Q9BTC0 2240 aaKnown RBP10.2□□□□□ -0.78
SIN3A-202ENST00000394947 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.2□□□□□ -0.78
SIN3A-202ENST00000394947 SPATA31B1PQ5VZV4 182 aa10.2□□□□□ -0.78
SIN3A-202ENST00000394947 DTX2Q86UW9 622 aa10.2□□□□□ -0.78
SIN3A-202ENST00000394947 METRNQ9UJH8 293 aa10.2□□□□□ -0.78
SIN3A-202ENST00000394947 A0A096LPF7 62 aa10.2□□□□□ -0.78
SIN3A-202ENST00000394947 LAGE3Q14657 143 aa10.2□□□□□ -0.78
SIN3A-202ENST00000394947 ZNF329Q86UD4 541 aa10.2□□□□□ -0.78
SIN3A-202ENST00000394947 PRSS22Q9GZN4 317 aa10.2□□□□□ -0.78
SIN3A-202ENST00000394947 ADAMTSL1Q8N6G6 1762 aa10.2□□□□□ -0.78
SIN3A-202ENST00000394947 ESPL1Q14674 2120 aa10.2□□□□□ -0.78
SIN3A-202ENST00000394947 A0A087WV48 116 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 TRBV5-3A0A0A0MS03 114 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 OR9G9P0C7N8 305 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 Q6ZT83 130 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 MAPK1IP1LQ8NDC0 245 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 FAM57AQ8TBR7 257 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 SAP25Q8TEE9 199 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 ZNF319Q9P2F9 582 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 PAX8Q06710 450 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 PILRAQ9UKJ1 303 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 PSG7Q13046 419 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 C5orf47Q569G3 176 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 OCC1Q8TAD7 63 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 TIMM23O14925 209 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 TPTE2P1Q5T6R2 138 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 SAXO1Q8IYX7 474 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 BMPERQ8N8U9 685 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 NEU4Q8WWR8 484 aaPredicted RBP10.19□□□□□ -0.78
SIN3A-202ENST00000394947 RFNGQ9Y644 331 aa10.19□□□□□ -0.78
SIN3A-202ENST00000394947 CLPSL2Q6UWE3 100 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms