RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 MRPS10P82664 201 aaKnown RBP6.52□□□□□ -1.37
ATG4A-205ENST00000394892 ERHP84090 104 aaKnown RBP6.52□□□□□ -1.37
ATG4A-205ENST00000394892 TMEM187Q14656 261 aa6.52□□□□□ -1.37
ATG4A-205ENST00000394892 TRIM16LQ309B1 348 aa6.52□□□□□ -1.37
ATG4A-205ENST00000394892 TRIM63Q969Q1 353 aa6.52□□□□□ -1.37
ATG4A-205ENST00000394892 CACNG5Q9UF02 275 aa6.52□□□□□ -1.37
ATG4A-205ENST00000394892 PUS1Q9Y606 427 aaKnown RBP eCLIP6.52□□□□□ -1.37
ATG4A-205ENST00000394892 TMEM56-RWDD3S4R434 201 aa6.52□□□□□ -1.37
ATG4A-205ENST00000394892 IGKV3-7A0A075B6H7 116 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 TRAV14DV4A0A0A6YYC5 116 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 GNG7O60262 68 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 DFFBO76075 338 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 IFNA17P01571 189 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 AKAIN1P0CW23 69 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 RPL35AP18077 110 aaKnown RBP6.51□□□□□ -1.37
ATG4A-205ENST00000394892 TFPI2P48307 235 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 SPCS3P61009 180 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 RELQ04864 619 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-205ENST00000394892 KLF9Q13886 244 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-205ENST00000394892 IL18Q14116 193 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 SURF2Q15527 256 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-205ENST00000394892 DEFB135Q30KP9 77 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 ANKRD55Q3KP44 614 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 TIGITQ495A1 244 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 LAMTOR1Q6IAA8 161 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 WFDC3Q8IUB2 231 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 GBGT1Q8N5D6 347 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 SLC35G3Q8N808 338 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 CCDC71LQ8N9Z2 235 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 OR52E5Q8NH55 327 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 C15orf40Q8WUR7 153 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 RBPMSQ93062 196 aaKnown RBP6.51□□□□□ -1.37
ATG4A-205ENST00000394892 BCL7BQ9BQE9 202 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 RBM38Q9H0Z9 239 aaKnown RBP6.51□□□□□ -1.37
ATG4A-205ENST00000394892 MAP6D1Q9H9H5 199 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 V9GYH0 126 aa6.51□□□□□ -1.37
ATG4A-205ENST00000394892 A0A0J9YWU9 116 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 CXorf65A6NEN9 183 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 OR4C46A6NHA9 309 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 DISC1C4P0D8 188 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 CLN5O75503 358 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 GIG44P09565 113 aaPredicted RBP6.5□□□□□ -1.37
ATG4A-205ENST00000394892 SNCAP37840 140 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 HOXA1P49639 335 aaPredicted RBP6.5□□□□□ -1.37
ATG4A-205ENST00000394892 ZNF79Q15937 498 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 NMSQ5H8A3 153 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 TMEM268Q5VZI3 342 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 PRSS54Q6PEW0 395 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 ZNF600Q6ZNG1 722 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 Q6ZWC4 215 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 TCF24Q7RTU0 167 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 LYZL2Q7Z4W2 148 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 DUSP18Q8NEJ0 188 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 OR4X1Q8NH49 305 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 LINC00476Q8WZB0 136 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 RNF183Q96D59 192 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 RRNAD1Q96FB5 475 aaKnown RBP6.5□□□□□ -1.37
ATG4A-205ENST00000394892 GALNT14Q96FL9 552 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 KRTAP17-1Q9BYP8 105 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 C6orf62Q9GZU0 229 aaPredicted RBP6.5□□□□□ -1.37
ATG4A-205ENST00000394892 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.5□□□□□ -1.37
ATG4A-205ENST00000394892 U3KQE9 123 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 KMT2AQ03164 3969 aa6.5□□□□□ -1.37
ATG4A-205ENST00000394892 KIR2DL5BA0A0G2JN68 375 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 KIR2DL5BA0A0G2JPC4 375 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 NUPR2A6NF83 97 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 SPRY2O43597 315 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 B3GALNT1O75752 331 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 IGLC1P0CG04 106 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 CRYBB3P26998 211 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 NPBWR1P48145 328 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 DHODHQ02127 395 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 TNFRSF9Q07011 255 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 RBMS2Q15434 407 aaKnown RBP6.49□□□□□ -1.37
ATG4A-205ENST00000394892 C2orf83Q53S99 150 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 LYG2Q86SG7 212 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 FAM219AQ8IW50 185 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 KIR2DL5AQ8N109 375 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 KIR2DL5BQ8NHK3 375 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 MS4A6AQ9H2W1 248 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 C14orf166Q9Y224 244 aaKnown RBP6.49□□□□□ -1.37
ATG4A-205ENST00000394892 TP53TG1Q9Y2A0 90 aa6.49□□□□□ -1.37
ATG4A-205ENST00000394892 FABP12A6NFH5 140 aa6.48□□□□□ -1.37
ATG4A-205ENST00000394892 PITX3O75364 302 aa6.48□□□□□ -1.37
ATG4A-205ENST00000394892 ATG12O94817 140 aa6.48□□□□□ -1.37
ATG4A-205ENST00000394892 OPRK1P41145 380 aa6.48□□□□□ -1.37
ATG4A-205ENST00000394892 RND2P52198 227 aa6.48□□□□□ -1.37
ATG4A-205ENST00000394892 GSG1LQ6UXU4 331 aa6.48□□□□□ -1.37
ATG4A-205ENST00000394892 CCDC190Q86UF4 302 aa6.48□□□□□ -1.37
ATG4A-205ENST00000394892 STPG3Q8N7X2 389 aa6.48□□□□□ -1.37
ATG4A-205ENST00000394892 MCFD2Q8NI22 146 aa6.48□□□□□ -1.37
ATG4A-205ENST00000394892 PRRT1Q99946 306 aa6.48□□□□□ -1.37
ATG4A-205ENST00000394892 RSL24D1Q9UHA3 163 aaKnown RBP6.48□□□□□ -1.37
ATG4A-205ENST00000394892 KLK5Q9Y337 293 aaPredicted RBP6.48□□□□□ -1.37
ATG4A-205ENST00000394892 VPS13DQ5THJ4 4388 aa6.48□□□□□ -1.37
ATG4A-205ENST00000394892 DNAH10Q8IVF4 4471 aa6.48□□□□□ -1.37
ATG4A-205ENST00000394892 IGKV1D-37A0A075B6S9 117 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 K7EQG2 157 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 UBE2CO00762 179 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 AKR1C4P17516 323 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms