RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TRAV41A0A0B4J266 112 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 IGKV1D-13A0A0B4J2D9 117 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 TRBV7-9A0A0J9YWB2 115 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 TMEM50AO95807 157 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 IGKV1-13P0DP09 117 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 TMEM219Q86XT9 240 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 ST20Q9HBF5 79 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 IZUMO1RA6ND01 250 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 DEFB121Q5J5C9 76 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 ORMDL3Q8N138 153 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 SELENOKQ9Y6D0 94 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 TRAV21A0A0B4J279 112 aa8.63□□□□□ -1.03
COL4A6-203ENST00000394872 ZNF415Q09FC8 603 aa8.63□□□□□ -1.03
COL4A6-203ENST00000394872 PLSCR4Q9NRQ2 329 aa8.63□□□□□ -1.03
COL4A6-203ENST00000394872 TET1Q8NFU7 2136 aa8.63□□□□□ -1.03
COL4A6-203ENST00000394872 ASXL3Q9C0F0 2248 aa8.63□□□□□ -1.03
COL4A6-203ENST00000394872 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.63□□□□□ -1.03
COL4A6-203ENST00000394872 CD33P20138 364 aa8.63□□□□□ -1.03
COL4A6-203ENST00000394872 EFNB1P98172 346 aa8.63□□□□□ -1.03
COL4A6-203ENST00000394872 KLRD1Q13241 179 aa8.63□□□□□ -1.03
COL4A6-203ENST00000394872 DMRTA1Q5VZB9 504 aa8.63□□□□□ -1.03
COL4A6-203ENST00000394872 TBX6O95947 436 aaPredicted RBP8.63□□□□□ -1.03
COL4A6-203ENST00000394872 IGHV2-26A0A0B4J1V2 119 aa8.63□□□□□ -1.03
COL4A6-203ENST00000394872 SIGLEC15Q6ZMC9 328 aa8.63□□□□□ -1.03
COL4A6-203ENST00000394872 DTX2Q86UW9 622 aa8.63□□□□□ -1.03
COL4A6-203ENST00000394872 TBL2Q9Y4P3 447 aaKnown RBP8.63□□□□□ -1.03
COL4A6-203ENST00000394872 PSMG4Q5JS54 123 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 TTC9CQ8N5M4 171 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 TNFRSF14Q92956 283 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 SPTBP11277 2137 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 TRGV11A0A075B6L2 103 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 HIGD1CA8MV81 97 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 BEND2Q8NDZ0 799 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 SDHCQ99643 169 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-203ENST00000394872 A0A0G2JNJ9 132 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 SRP19P09132 144 aaKnown RBP8.62□□□□□ -1.03
COL4A6-203ENST00000394872 NEUROG1Q92886 237 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 Q9UFV3 132 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 GGNQ86UU5 652 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 OR9G4Q8NGQ1 327 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 MBD3L1Q8WWY6 194 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 THADAQ6YHU6 1953 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 DICER1Q9UPY3 1922 aaKnown RBP8.62□□□□□ -1.03
COL4A6-203ENST00000394872 MLNRO43193 412 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 SNAI2O43623 268 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 CCL1P22362 96 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 ERVK11-1P61568 191 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 VCX2Q9H322 139 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 A0A0G2JMZ2 1700 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 LRRC37A2A6NM11 1700 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 GREB1LQ9C091 1923 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-203ENST00000394872 IFI27P40305 119 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-203ENST00000394872 TMEM200BQ69YZ2 307 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 NUDT10Q8NFP7 164 aa8.62□□□□□ -1.03
COL4A6-203ENST00000394872 APC2O95996 2303 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 HEATR5BQ9P2D3 2071 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 IGKV1-9A0A0C4DH69 117 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 B4DSR2 109 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 SIPA1L1O43166 1804 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 ICE1Q9Y2F5 2266 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 CD55P08174 381 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 PRCDQ00LT1 54 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 ZNF257Q9Y2Q1 563 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 ZNF324BQ6AW86 544 aaPredicted RBP8.61□□□□□ -1.03
COL4A6-203ENST00000394872 LDLRAD4O15165 306 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 PYYP10082 97 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 DUTP33316 252 aaKnown RBP8.61□□□□□ -1.03
COL4A6-203ENST00000394872 RNASE7Q9H1E1 156 aaKnown RBP8.61□□□□□ -1.03
COL4A6-203ENST00000394872 C19orf67A6NJJ6 358 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 SCN5AQ14524 2016 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 NUDT11Q96G61 164 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 EPDR1Q9UM22 224 aa8.61□□□□□ -1.03
COL4A6-203ENST00000394872 LCTP09848 1927 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 TMEM178BH3BS89 294 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 FOXG1P55316 489 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-203ENST00000394872 CMC4P56277 68 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-203ENST00000394872 ZNF815PA8K554 130 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 BRD3OSQ6XYD6 125 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 ST6GALNAC3Q8NDV1 305 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 OR10W1Q8NGF6 305 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 ST6GALNAC6Q969X2 333 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 PPIFP30405 207 aaKnown RBP8.6□□□□□ -1.03
COL4A6-203ENST00000394872 Q0VFX4 171 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 C14orf144Q96I85 54 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 TRAV9-1A0A075B6T8 112 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 OVOL1O14753 267 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 SLC25A20O43772 301 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 APOMO95445 188 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 ZNF688P0C7X2 276 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 CTAG1AP78358 180 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 SRSF6Q13247 344 aaKnown RBP8.6□□□□□ -1.03
COL4A6-203ENST00000394872 TPTE2P1Q5T6R2 138 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 GFI1BQ5VTD9 330 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 IGHV1-8P0DP01 117 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 IFITM2Q01629 132 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 ZNF319Q9P2F9 582 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 PEF1Q9UBV8 284 aaKnown RBP8.6□□□□□ -1.03
COL4A6-203ENST00000394872 PSG8Q9UQ74 426 aa8.6□□□□□ -1.03
COL4A6-203ENST00000394872 NYNRINQ9P2P1 1898 aaKnown RBP8.6□□□□□ -1.03
COL4A6-203ENST00000394872 GREB1Q4ZG55 1949 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms