RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 LYNX1P0DP58 116 aa12.36□□□□□ -0.43
UBE2D3-207ENST00000394801 PRRX1P54821 245 aa12.36□□□□□ -0.43
UBE2D3-207ENST00000394801 PSG5Q15238 335 aa12.36□□□□□ -0.43
UBE2D3-207ENST00000394801 C10orf55Q5SWW7 151 aa12.36□□□□□ -0.43
UBE2D3-207ENST00000394801 PVRIGQ6DKI7 326 aa12.36□□□□□ -0.43
UBE2D3-207ENST00000394801 OR5T1Q8NG75 326 aa12.36□□□□□ -0.43
UBE2D3-207ENST00000394801 OR2T6Q8NHC8 308 aa12.36□□□□□ -0.43
UBE2D3-207ENST00000394801 TMEM37Q8WXS4 190 aa12.36□□□□□ -0.43
UBE2D3-207ENST00000394801 SFRP2Q96HF1 295 aa12.36□□□□□ -0.43
UBE2D3-207ENST00000394801 CACNA1BQ00975 2339 aa12.36□□□□□ -0.43
UBE2D3-207ENST00000394801 PGPEP1LA6NFU8 196 aa12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 C9JCJ5 164 aa12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 TAS2R45P59539 299 aa12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 ZNF664Q8N3J9 261 aa12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 OCC1Q8TAD7 63 aa12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 C8orf46Q8TAG6 207 aa12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 BTF3L4Q96K17 158 aa12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 SLC25A33Q9BSK2 321 aa12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 FNDC4Q9H6D8 234 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 AURKAIP1Q9NWT8 199 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 IGF2RP11717 2491 aa12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 CRYGBP07316 175 aa12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 ADORA2A-AS1P86434 159 aa12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 ACY3Q96HD9 319 aa12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 RNF2Q99496 336 aa12.35□□□□□ -0.43
UBE2D3-207ENST00000394801 MALRD1Q5VYJ5 2156 aa12.34□□□□□ -0.43
UBE2D3-207ENST00000394801 PDLIM4P50479 330 aa12.34□□□□□ -0.43
UBE2D3-207ENST00000394801 MRPL32Q9BYC8 188 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-207ENST00000394801 TPSG1Q9NRR2 321 aa12.34□□□□□ -0.43
UBE2D3-207ENST00000394801 A0A1W2PPI3 338 aa12.34□□□□□ -0.43
UBE2D3-207ENST00000394801 BUB1B-PAK6H3BSN5 160 aa12.34□□□□□ -0.43
UBE2D3-207ENST00000394801 C8orf88P0DMB2 117 aa12.34□□□□□ -0.43
UBE2D3-207ENST00000394801 THAP8Q8NA92 274 aa12.34□□□□□ -0.43
UBE2D3-207ENST00000394801 CLEC7AQ9BXN2 247 aa12.34□□□□□ -0.43
UBE2D3-207ENST00000394801 CDSNQ15517 529 aa12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 CLEC12BQ2HXU8 276 aa12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 TEX38Q6PEX7 206 aa12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 MMD2Q8IY49 270 aa12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 DNAJC4Q9NNZ3 241 aa12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 PPIAL4CA0A0B4J2A2 164 aa12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 MDFIC2A0A1B0GVS7 189 aa12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 XKRY2A2RUG3 117 aa12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 ENSAO43768 121 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 PPIAL4GP0DN37 164 aa12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 PRSS8Q16651 343 aa12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 ACTL10Q5JWF8 245 aa12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 NEU1Q99519 415 aa12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 INSIG2Q9Y5U4 225 aa12.33□□□□□ -0.44
UBE2D3-207ENST00000394801 IGKV1D-37A0A075B6S9 117 aa12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 IGHV3-72A0A0B4J1Y9 119 aa12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 IGHV1-3A0A0C4DH29 117 aa12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 A0A1W2PRE2 83 aa12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 IGLC7A0M8Q6 106 aa12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 CRYGCP07315 174 aa12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 FAM167A-AS1Q96KT0 104 aa12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 NAV3Q8IVL0 2385 aa12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 TCRBV4S1A1TA0A5B7 111 aa12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 OR7C2O60412 319 aa12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 SELENOTP62341 195 aa12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 MRPL41Q8IXM3 137 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 LY6G5BQ8NDX9 201 aa12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 NPIPB3Q92617 1050 aa12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 EAF1Q96JC9 268 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-207ENST00000394801 K7EN84 100 aa12.31□□□□□ -0.44
UBE2D3-207ENST00000394801 SSBP2P81877 361 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-207ENST00000394801 USF2Q15853 346 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-207ENST00000394801 OR10G8Q8NGN5 311 aa12.31□□□□□ -0.44
UBE2D3-207ENST00000394801 SGMS2Q8NHU3 365 aa12.31□□□□□ -0.44
UBE2D3-207ENST00000394801 SIGLEC9Q9Y336 463 aa12.31□□□□□ -0.44
UBE2D3-207ENST00000394801 RELNP78509 3460 aa12.31□□□□□ -0.44
UBE2D3-207ENST00000394801 ZZEF1O43149 2961 aa12.31□□□□□ -0.44
UBE2D3-207ENST00000394801 DLX1P56177 255 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 RPL15P61313 204 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 OR8B3Q8NGG8 313 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 OR1L4Q8NGR5 311 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 OR8B2Q96RD0 313 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 RAB1BQ9H0U4 201 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 LRBAP50851 2863 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 ABCA4P78363 2273 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 HELTA6NFD8 242 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 LY6LH3BQJ8 138 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 TCAPO15273 167 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 RPL27AP46776 148 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 NUTF2P61970 127 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 PAX2Q02962 417 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 ETFRF1Q6IPR1 90 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 TMEM18Q96B42 140 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 RNF5Q99942 180 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 SLC25A2Q9BXI2 301 aa12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 MRPL36Q9P0J6 103 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 AMMECR1Q9Y4X0 333 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-207ENST00000394801 GGTLC3B5MD39 225 aa12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 CNTFRP26992 372 aa12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 CRYBB3P26998 211 aa12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 COMPP49747 757 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 MORN5Q5VZ52 161 aa12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 PATE2Q6UY27 113 aa12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 TPRP12270 2363 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 TRAV9-1A0A075B6T8 112 aa12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 A0A0U1RQK1 487 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms