RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 TPPP3Q9BW30 176 aa8.61□□□□□ -1.03
ACTN1-203ENST00000394419 DNAJC4Q9NNZ3 241 aa8.61□□□□□ -1.03
ACTN1-203ENST00000394419 A8MWP6 167 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 USF1P22415 310 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-203ENST00000394419 PRCDQ00LT1 54 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 LEMD1Q68G75 181 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 ETFRF1Q6IPR1 90 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 C19orf35Q6ZS72 473 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 Q8N7P7 452 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 CNIH1O95406 144 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 CD99P14209 185 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 GNG5P63218 68 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 LYPD2Q6UXB3 125 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 ST6GALNAC3Q8NDV1 305 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 BORCS7Q96B45 105 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 TXN2Q99757 166 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 NDUFAF3Q9BU61 184 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 AMMECR1Q9Y4X0 333 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-203ENST00000394419 IGKV1OR2-108A0A075B7D4 117 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 GUSBP1Q15486 140 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 OR5B3Q8NH48 314 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 DIRC2Q96SL1 478 aa8.6□□□□□ -1.03
ACTN1-203ENST00000394419 TRGV8A0A0C4DH27 118 aa8.59□□□□□ -1.03
ACTN1-203ENST00000394419 FAM90A9PA6NNJ1 464 aa8.59□□□□□ -1.03
ACTN1-203ENST00000394419 M0R143 59 aa8.59□□□□□ -1.03
ACTN1-203ENST00000394419 EREGO14944 169 aa8.59□□□□□ -1.03
ACTN1-203ENST00000394419 MAJINQ3KP22 176 aa8.59□□□□□ -1.03
ACTN1-203ENST00000394419 VMA21Q3ZAQ7 101 aa8.59□□□□□ -1.03
ACTN1-203ENST00000394419 ZNF788Q6ZQV5 615 aa8.59□□□□□ -1.03
ACTN1-203ENST00000394419 OR2D3Q8NGH3 330 aa8.59□□□□□ -1.03
ACTN1-203ENST00000394419 DAZAP1Q96EP5 407 aaKnown RBP8.59□□□□□ -1.03
ACTN1-203ENST00000394419 LSM4Q9Y4Z0 139 aaKnown RBP8.59□□□□□ -1.03
ACTN1-203ENST00000394419 C17orf100A8MU93 164 aa8.59□□□□□ -1.03
ACTN1-203ENST00000394419 HSBP1O75506 76 aa8.59□□□□□ -1.03
ACTN1-203ENST00000394419 GPR6P46095 362 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-203ENST00000394419 SSBP2P81877 361 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-203ENST00000394419 NEUROG1Q92886 237 aa8.59□□□□□ -1.03
ACTN1-203ENST00000394419 ARHGAP32A7KAX9 2087 aa8.59□□□□□ -1.03
ACTN1-203ENST00000394419 PGPA6NDG6 321 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 GGTLC3B5MD39 225 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 DLL1O00548 723 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 RBP4P02753 201 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 RPL15P61313 204 aaKnown RBP8.59□□□□□ -1.04
ACTN1-203ENST00000394419 CD69Q07108 199 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 COTL1Q14019 142 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 TDRG1Q3Y452 100 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 ANKRD39Q53RE8 183 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 MORN5Q5VZ52 161 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 TMEM200BQ69YZ2 307 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 RNASEKQ6P5S7 137 aaKnown RBP8.59□□□□□ -1.04
ACTN1-203ENST00000394419 OR4C13Q8NGP0 309 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 DDB2Q92466 427 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 ABHD17AQ96GS6 310 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 SSBP4Q9BWG4 385 aaPredicted RBP8.59□□□□□ -1.04
ACTN1-203ENST00000394419 WNT10AQ9GZT5 417 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 GSX1Q9H4S2 264 aaPredicted RBP8.59□□□□□ -1.04
ACTN1-203ENST00000394419 TMEM106BQ9NUM4 274 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.59□□□□□ -1.045e-7■■■□□ 17.7
ACTN1-203ENST00000394419 ZNF292O60281 2723 aa8.59□□□□□ -1.04
ACTN1-203ENST00000394419 DIRC3C9JPN6 131 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 E7EUB6 86 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 TYMSP04818 313 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 ZNF137PP52743 207 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 LGALS4P56470 323 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 LINC00305Q7Z4B0 112 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 PDPNQ86YL7 162 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.58□□□□□ -1.04
ACTN1-203ENST00000394419 SFXN3Q9BWM7 321 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 RALYQ9UKM9 306 aaKnown RBP8.58□□□□□ -1.04
ACTN1-203ENST00000394419 DPRXA6NFQ7 191 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 BRS3P32247 399 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 CDKN1AP38936 164 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 LYZP61626 148 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 HES1Q14469 280 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 SLC25A48Q6ZT89 311 aaKnown RBP8.58□□□□□ -1.04
ACTN1-203ENST00000394419 NEU1Q99519 415 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 ZNF430Q9H8G1 570 aaPredicted RBP8.58□□□□□ -1.04
ACTN1-203ENST00000394419 GNB4Q9HAV0 340 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 LINC00312Q9Y6C7 94 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 SPTBN4Q9H254 2564 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 CHD8Q9HCK8 2581 aa8.58□□□□□ -1.04
ACTN1-203ENST00000394419 APCSP02743 223 aa8.57□□□□□ -1.04
ACTN1-203ENST00000394419 RNASE2P10153 161 aaKnown RBP8.57□□□□□ -1.04
ACTN1-203ENST00000394419 TMEM183BQ1AE95 376 aa8.57□□□□□ -1.04
ACTN1-203ENST00000394419 KIR3DL3Q8N743 410 aa8.57□□□□□ -1.04
ACTN1-203ENST00000394419 VSTM2AQ8TAG5 236 aa8.57□□□□□ -1.04
ACTN1-203ENST00000394419 RNASEH2CQ8TDP1 164 aaKnown RBP8.57□□□□□ -1.04
ACTN1-203ENST00000394419 TNFRSF19Q9NS68 423 aa8.57□□□□□ -1.04
ACTN1-203ENST00000394419 POLR3KQ9Y2Y1 108 aaPredicted RBP8.57□□□□□ -1.04
ACTN1-203ENST00000394419 TBL2Q9Y4P3 447 aaKnown RBP8.57□□□□□ -1.04
ACTN1-203ENST00000394419 INSIG2Q9Y5U4 225 aa8.57□□□□□ -1.04
ACTN1-203ENST00000394419 S4R3C0 116 aa8.57□□□□□ -1.04
ACTN1-203ENST00000394419 MAP1AP78559 2803 aaPredicted RBP8.57□□□□□ -1.04
ACTN1-203ENST00000394419 FAM90A27PA6NNH2 459 aa8.57□□□□□ -1.04
ACTN1-203ENST00000394419 LHBP01229 141 aa8.57□□□□□ -1.04
ACTN1-203ENST00000394419 CFHR2P36980 270 aa8.57□□□□□ -1.04
ACTN1-203ENST00000394419 ZNF439Q8NDP4 499 aa8.57□□□□□ -1.04
ACTN1-203ENST00000394419 OSR1Q8TAX0 266 aaPredicted RBP8.57□□□□□ -1.04
ACTN1-203ENST00000394419 SLC25A33Q9BSK2 321 aa8.57□□□□□ -1.04
ACTN1-203ENST00000394419 TPSG1Q9NRR2 321 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms