RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 M0R1W7 72 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 C8orf88P0DMB2 117 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 SELENOTP62341 195 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 PPP1R27Q86WC6 154 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 LINC00469Q8N7U9 141 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 NPIPB3Q92617 1050 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 FRZBQ92765 325 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 FAM167A-AS1Q96KT0 104 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 TCEAL7Q9BRU2 100 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 DNAJC4Q9NNZ3 241 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 MRPL36Q9P0J6 103 aaKnown RBP7.25□□□□□ -1.25
TDP1-202ENST00000393452 ONECUT1Q9UBC0 465 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 LY96Q9Y6Y9 160 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 C9JCJ5 164 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 PPP1R2P9O14990 202 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 REG1AP05451 166 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 SMIM6P0DI80 62 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 MFAP2P55001 183 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 TNXAQ16473 311 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 ETFRF1Q6IPR1 90 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 UNQ6494/PRO21346Q6UXR6 183 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 NECAP1Q8NC96 275 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 UHRF2Q96PU4 802 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 IMMP2LQ96T52 175 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 HRNRQ86YZ3 2850 aaPredicted RBP7.24□□□□□ -1.25
TDP1-202ENST00000393452 A0A1W2PRE2 83 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 PGPEP1LA6NFU8 196 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 TEX22C9J3V5 150 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 TYMSP04818 313 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 TRGC1P0CF51 173 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 BTF3P20290 206 aaKnown RBP7.24□□□□□ -1.25
TDP1-202ENST00000393452 CDX1P47902 265 aaPredicted RBP7.24□□□□□ -1.25
TDP1-202ENST00000393452 TPTE2P1Q5T6R2 138 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 OR1P1Q8NH06 330 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 OCC1Q8TAD7 63 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 SFRP2Q96HF1 295 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 PFDN5Q99471 154 aa7.24□□□□□ -1.25
TDP1-202ENST00000393452 SSBP3Q9BWW4 388 aaPredicted RBP7.24□□□□□ -1.25
TDP1-202ENST00000393452 WNK2Q9Y3S1 2297 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 IFITM10A6NMD0 228 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 ODF3BA8MYP8 253 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 LINC00587B1AMM8 73 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 OR7C2O60412 319 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 PRTN3P24158 256 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 HTR1DP28221 377 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 NDUFA6P56556 154 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 ARF6P62330 175 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 LCN2P80188 198 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 ZNF90Q03938 601 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 MORN5Q5VZ52 161 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 HCP5Q6MZN7 132 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 PATE2Q6UY27 113 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 C1orf122Q6ZSJ8 110 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 TMEM116Q8NCL8 245 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 OR5T1Q8NG75 326 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 OR2T10Q8NGZ9 312 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 SLC25A2Q9BXI2 301 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 AURKAIP1Q9NWT8 199 aaPredicted RBP7.23□□□□□ -1.25
TDP1-202ENST00000393452 DPM3Q9P2X0 92 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 DCHS2Q6V1P9 2916 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 LOC105371242A0A075B767 164 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 A0A1W2PPQ1 181 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 GGTLC3B5MD39 225 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 PPP5D1E7EU14 171 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 CORTO00230 105 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 TIMM23O14925 209 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 IGHV3-48P01763 117 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 FAM3BP58499 235 aaPredicted RBP7.23□□□□□ -1.25
TDP1-202ENST00000393452 FOXL1Q12952 345 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 RUSC1-AS1Q66K80 236 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 TEX38Q6PEX7 206 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 OR1L4Q8NGR5 311 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 OR4X1Q8NH49 305 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 CFHR4Q92496 578 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 TRGV9Q99603 122 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 SRSF8Q9BRL6 282 aaKnown RBP7.23□□□□□ -1.25
TDP1-202ENST00000393452 FBXL15Q9H469 300 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 F11RQ9Y624 299 aaKnown RBP7.23□□□□□ -1.25
TDP1-202ENST00000393452 LRBAP50851 2863 aa7.23□□□□□ -1.25
TDP1-202ENST00000393452 ACACBO00763 2458 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 A6NNC1 897 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 BPIFB3P59826 476 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 SSX2Q16385 188 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 C4orf17Q53FE4 359 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 C10orf113Q5VZT2 155 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 KCNIP4Q6PIL6 250 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 ITLN2Q8WWU7 325 aaPredicted RBP7.22□□□□□ -1.25
TDP1-202ENST00000393452 SRSF12Q8WXF0 261 aaKnown RBP7.22□□□□□ -1.25
TDP1-202ENST00000393452 DMRT1Q9Y5R6 373 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 MED13LQ71F56 2210 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 ELOA3CA0A087WX78 387 aaPredicted RBP7.22□□□□□ -1.25
TDP1-202ENST00000393452 MDFIC2A0A1B0GVS7 189 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 K7EN84 100 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 FCN1O00602 326 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 COX7A2P2O60397 106 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 OR10J4P0C629 311 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 SVIPQ8NHG7 77 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 MISP3Q96FF7 219 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 EAF1Q96JC9 268 aaPredicted RBP7.22□□□□□ -1.25
TDP1-202ENST00000393452 BTF3L4Q96K17 158 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms