RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 SLC25A42Q86VD7 318 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 ZNF101Q8IZC7 436 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 BAALCQ8WXS3 180 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 COMMD5Q9GZQ3 224 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 C20orf141Q9NUB4 165 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 SLC39A9Q9NUM3 307 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 FNDC10F2Z333 226 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 HOXA3O43365 443 aaPredicted RBP6.73□□□□□ -1.33
LIMS1-203ENST00000393310 CD3DP04234 171 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 TMEM225BP0DP42 221 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 MTPNP58546 118 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 PSG9Q00887 426 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 ABCA11PQ4W5N1 156 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 GFI1BQ5VTD9 330 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 TMEM229BQ8NBD8 167 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 OR10J6PQ8NGY7 276 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 KLF14Q8TD94 323 aaPredicted RBP6.73□□□□□ -1.33
LIMS1-203ENST00000393310 NRTNQ99748 197 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 PRADC1Q9BSG0 188 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 F11RQ9Y624 299 aaKnown RBP6.73□□□□□ -1.33
LIMS1-203ENST00000393310 CD300LBA8K4G0 201 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 NPFFO15130 113 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 RER1O15258 196 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 MMP23AO75900 390 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 CD1AP06126 327 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 GATA4P43694 442 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 EGR4Q05215 589 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 FAM27BQ5VT28 67 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 ZNF626Q68DY1 528 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 CLECL1Q8IZS7 167 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 PPP1R1CQ8WVI7 109 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 FBXL15Q9H469 300 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 EHFQ9NZC4 300 aa6.73□□□□□ -1.33
LIMS1-203ENST00000393310 SCN3AQ9NY46 2000 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 TRAV5A0A0B4J249 113 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 DNAJC9-AS1A6NH13 148 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 SHISA9B4DS77 424 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 GPR183P32249 361 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 ZNF121P58317 390 aaPredicted RBP6.72□□□□□ -1.33
LIMS1-203ENST00000393310 UBE2L3P68036 154 aaKnown RBP6.72□□□□□ -1.33
LIMS1-203ENST00000393310 TFF3Q07654 80 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 RGNQ15493 299 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 ACSM6Q6P461 480 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 VKORC1L1Q8N0U8 176 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 STPG4Q8N801 248 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 OR10G7Q8NGN6 311 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 OR13A1Q8NGR1 328 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 NEUROG1Q92886 237 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 SORT1Q99523 831 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 TMEM147Q9BVK8 224 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 MS4A6AQ9H2W1 248 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 EDA2RQ9HAV5 297 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 AP5S1Q9NUS5 200 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 V9GYH0 126 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 A6NIN4 97 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 ZFP92A6NM28 416 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 OVOL3O00110 214 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 GYPAP02724 150 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 PAX9P55771 341 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 ANXA2RQ3ZCQ2 193 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 FAM57BQ71RH2 274 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 RNF152Q8N8N0 203 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 OR51H1Q8NH63 302 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 OR4A5Q8NH83 315 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 PLPPR1Q8TBJ4 325 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 WNK1Q9H4A3 2382 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 NME4O00746 187 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 GAPDHP04406 335 aaKnown RBP6.72□□□□□ -1.33
LIMS1-203ENST00000393310 KIR2DS2P43631 304 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 DHRS2Q13268 280 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 WDR25Q64LD2 544 aaPredicted RBP6.72□□□□□ -1.33
LIMS1-203ENST00000393310 GOLT1AQ6ZVE7 132 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 BRK1Q8WUW1 75 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 CLEC7AQ9BXN2 247 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 WDR13Q9H1Z4 485 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 KLF12Q9Y4X4 402 aa6.72□□□□□ -1.33
LIMS1-203ENST00000393310 C3orf84H3BNL1 204 aa6.71□□□□□ -1.33
LIMS1-203ENST00000393310 GCM2O75603 506 aaPredicted RBP6.71□□□□□ -1.33
LIMS1-203ENST00000393310 KLF17Q5JT82 389 aaPredicted RBP6.71□□□□□ -1.33
LIMS1-203ENST00000393310 ENTPD8Q5MY95 495 aa6.71□□□□□ -1.33
LIMS1-203ENST00000393310 C8orf86Q6ZUL3 223 aa6.71□□□□□ -1.33
LIMS1-203ENST00000393310 MGST2Q99735 147 aa6.71□□□□□ -1.33
LIMS1-203ENST00000393310 PBOV1Q9GZY1 135 aa6.71□□□□□ -1.33
LIMS1-203ENST00000393310 DPM3Q9P2X0 92 aa6.71□□□□□ -1.33
LIMS1-203ENST00000393310 RBFOX3A6NFN3 312 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 TSPOP30536 169 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 MYCNOSP40205 109 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 GLIPR1P48060 266 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 CAV3P56539 151 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 RAE1P78406 368 aaKnown RBP6.71□□□□□ -1.34
LIMS1-203ENST00000393310 RBPMS2Q6ZRY4 209 aaKnown RBP6.71□□□□□ -1.34
LIMS1-203ENST00000393310 FBLN5Q9UBX5 448 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 IER3IP1Q9Y5U9 82 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 DSCAMO60469 2012 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 TRANK1O15050 2925 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 COL4A2P08572 1712 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 A0A087WWC5 75 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 ZNF561-AS1K7EIQ3 104 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 HOXB4P17483 251 aaPredicted RBP6.71□□□□□ -1.34
LIMS1-203ENST00000393310 TIRAPP58753 221 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 274.1 ms