RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CCL7P80098 99 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 PSMG4Q5JS54 123 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 C9orf153Q5TBE3 101 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 Q6ZUT4 128 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 RPEQ96AT9 228 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 C10orf35Q96D05 121 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 TAAR6Q96RI8 345 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 AICDAQ9GZX7 198 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 LIME1Q9H400 295 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 SPANXB1Q9NS25 103 aaPredicted RBP6.36□□□□□ -1.39
VTI1A-201ENST00000393077 V9GYV3 84 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 IGKV1D-13A0A0B4J2D9 117 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 FABP5P3A8MUU1 101 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 PATE3B3GLJ2 98 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 FNDC10F2Z333 226 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 H0YIG0 161 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 TSPAN13O95857 204 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 IGKV1-13P0DP09 117 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 GATA3P23771 443 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 OSR1Q8TAX0 266 aaPredicted RBP6.36□□□□□ -1.39
VTI1A-201ENST00000393077 CYYR1Q96J86 154 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 TMUB1Q9BVT8 246 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 NLRC5Q86WI3 1866 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 A4D1N5 150 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 RRHO14718 337 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 DHHO43323 396 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 MZT1Q08AG7 82 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 FHL5Q5TD97 284 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 PPP1R27Q86WC6 154 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 C3orf56Q8N813 242 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 ARRDC1-AS1Q9H2J1 176 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 AMMECR1Q9Y4X0 333 aaPredicted RBP6.36□□□□□ -1.39
VTI1A-201ENST00000393077 TNFRSF18Q9Y5U5 241 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 HTTP42858 3142 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 IGHV1-24A0A0C4DH33 117 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 HOXA3O43365 443 aaPredicted RBP6.35□□□□□ -1.39
VTI1A-201ENST00000393077 COX7A2P2O60397 106 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 P04436 131 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 SRYQ05066 204 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 FOXI1Q12951 378 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 FOXI2Q6ZQN5 318 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 TMEM126AQ9H061 195 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 RPL30P62888 115 aaKnown RBP6.35□□□□□ -1.39
VTI1A-201ENST00000393077 POU2AF1Q16633 256 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 C18orf15Q96N68 181 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 CHAC1Q9BUX1 264 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 SIGLEC8Q9NYZ4 499 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 ATP23Q9Y6H3 246 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 BRCA2P51587 3418 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 TCF20Q9UGU0 1960 aaKnown RBP6.35□□□□□ -1.39
VTI1A-201ENST00000393077 A0A1W2PNR3 127 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 C2orf70A6NJV1 201 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 ZNF766Q5HY98 468 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 ACP7Q6ZNF0 438 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 KIR3DL3Q8N743 410 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 LRRK1Q38SD2 2015 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 MRPL23Q16540 153 aaKnown RBP6.35□□□□□ -1.39
VTI1A-201ENST00000393077 LINC00173Q6ZV60 143 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 NUP35Q8NFH5 326 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 DECR2Q9NUI1 292 aa6.35□□□□□ -1.39
VTI1A-201ENST00000393077 ACACAQ13085 2346 aa6.34□□□□□ -1.39
VTI1A-201ENST00000393077 A0A0G2JRQ6 117 aa6.34□□□□□ -1.39
VTI1A-201ENST00000393077 TNFSF14O43557 240 aa6.34□□□□□ -1.39
VTI1A-201ENST00000393077 ABHD17BQ5VST6 288 aa6.34□□□□□ -1.39
VTI1A-201ENST00000393077 WFDC3Q8IUB2 231 aa6.34□□□□□ -1.39
VTI1A-201ENST00000393077 OR1L1Q8NH94 360 aa6.34□□□□□ -1.39
VTI1A-201ENST00000393077 ZDHHC16Q969W1 377 aa6.34□□□□□ -1.39
VTI1A-201ENST00000393077 PTH2Q96A98 100 aa6.34□□□□□ -1.39
VTI1A-201ENST00000393077 NABP2Q9BQ15 211 aa6.34□□□□□ -1.39
VTI1A-201ENST00000393077 ZNF688P0C7X2 276 aa6.34□□□□□ -1.39
VTI1A-201ENST00000393077 C1orf147Q96MC9 270 aaPredicted RBP6.34□□□□□ -1.39
VTI1A-201ENST00000393077 FBXL15Q9H469 300 aa6.34□□□□□ -1.39
VTI1A-201ENST00000393077 GNG12Q9UBI6 72 aa6.34□□□□□ -1.39
VTI1A-201ENST00000393077 RANBP2P49792 3224 aaKnown RBP6.34□□□□□ -1.39
VTI1A-201ENST00000393077 ADIPOQQ15848 244 aa6.34□□□□□ -1.4
VTI1A-201ENST00000393077 IGFBP7Q16270 282 aa6.34□□□□□ -1.4
VTI1A-201ENST00000393077 TMEM14EPQ6UXP3 125 aa6.34□□□□□ -1.4
VTI1A-201ENST00000393077 ATP5L2Q7Z4Y8 100 aa6.34□□□□□ -1.4
VTI1A-201ENST00000393077 PPP1R32Q7Z5V6 425 aa6.34□□□□□ -1.4
VTI1A-201ENST00000393077 ST8SIA1Q92185 356 aa6.34□□□□□ -1.4
VTI1A-201ENST00000393077 HELZP42694 1942 aaKnown RBP6.33□□□□□ -1.4
VTI1A-201ENST00000393077 FOXS1O43638 330 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 FAM159AQ6UWV7 190 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 Q6ZRM9 215 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 C1orf210Q8IVY1 113 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 ZNF645Q8N7E2 425 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 TMEM160Q9NX00 188 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 WDR83OSQ9Y284 106 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 TRBV20OR9-2A0A075B6H5 130 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 TRAV8-4A0A0B4J246 113 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 OR2J3O76001 311 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 CLDN14O95500 239 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 RPL7P18124 248 aaKnown RBP6.33□□□□□ -1.4
VTI1A-201ENST00000393077 PCBD1P61457 104 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 LCNL1Q6ZST4 164 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 TEX45Q8NA69 505 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 OR1L8Q8NGR8 309 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 LRRC29Q8WV35 223 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 GLMPQ8WWB7 406 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 IFI27L1Q96BM0 104 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms