RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 CRCT1Q9UGL9 99 aa0.52□□□□□ -2.33
TRAJ41-201ENST00000390496 SLC22A13Q9Y226 551 aa0.52□□□□□ -2.33
TRAJ41-201ENST00000390496 TMEM56-RWDD3S4R434 201 aa0.52□□□□□ -2.33
TRAJ41-201ENST00000390496 SMARCA4P51532 1647 aa0.52□□□□□ -2.33
TRAJ41-201ENST00000390496 TAF1LQ8IZX4 1826 aa0.52□□□□□ -2.33
TRAJ41-201ENST00000390496 MCM3APO60318 1980 aa0.52□□□□□ -2.33
TRAJ41-201ENST00000390496 SNRNP200O75643 2136 aaKnown RBP0.52□□□□□ -2.33
TRAJ41-201ENST00000390496 OTOGLQ3ZCN5 2332 aa0.52□□□□□ -2.33
TRAJ41-201ENST00000390496 TRAV1-1A0A0B4J248 108 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 TRAPPC13A5PLN9 417 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 SDCBPO00560 298 aaPredicted RBP0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 PDE6DO43924 150 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 NUP155O75694 1391 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 ATP5HO75947 161 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 SBF1O95248 1867 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 HAND1O96004 215 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 HTR1AP08908 422 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 G6PCP35575 357 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 AKR1C3P42330 323 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 CEBPGP53567 150 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 FADDQ13158 208 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 EDDM3AQ14507 147 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 SURF2Q15527 256 aaPredicted RBP0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 TAF1AQ15573 450 aaPredicted RBP0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 LINC01554Q52M75 96 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 RNASE10Q5GAN6 216 aaKnown RBP0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 N4BP2Q86UW6 1770 aaPredicted RBP0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 ARHGEF28Q8N1W1 1705 aaKnown RBP0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 TMEM86AQ8N2M4 240 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 C3orf56Q8N813 242 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 OR52L1Q8NGH7 329 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 OR51A2Q8NGJ7 313 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 STAG3L4Q8TBR4 150 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 CT55Q8WUE5 264 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 C11orf40Q8WZ69 217 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 REG4Q9BYZ8 158 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 TANC2Q9HCD6 1990 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 GLTPQ9NZD2 209 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 ERGIC3Q9Y282 383 aa0.51□□□□□ -2.33
TRAJ41-201ENST00000390496 TRIOBPQ9H2D6 2365 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 TECTAO75443 2155 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 MYO18AQ92614 2054 aaKnown RBP0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 IGKV1-9A0A0C4DH69 117 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 SMIM23A6NLE4 172 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 TMEM210A6NLX4 147 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 C1orf196B1AJZ1 125 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 OR2T1O43869 369 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 SERPINA1P01009 418 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 SERPINE1P05121 402 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 RPSAP08865 295 aaKnown RBP0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 RNASE3P12724 160 aaKnown RBP0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 CYBAP13498 195 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 HSD11B1P28845 292 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 HOXA6P31267 233 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 EMP1P54849 157 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 RAB4BP61018 213 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 CNBPP62633 177 aaKnown RBP0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 CTAG1AP78358 180 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 STX5Q13190 355 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 DEFB113Q30KQ7 82 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 TMEM97Q5BJF2 176 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 SPANXN3Q5MJ09 141 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 Q6Q795 121 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 LCA10Q71F78 164 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 MIR17HGQ75NE6 70 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 MBD3L1Q8WWY6 194 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 AQP3Q92482 292 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 BORCS7Q96B45 105 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 SCGB3A1Q96QR1 104 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 NAA38Q9BRA0 125 aaKnown RBP0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 GINS4Q9BRT9 223 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 SLC50A1Q9BRV3 221 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 ADAT1Q9BUB4 502 aaKnown RBP0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 KRTAP4-1Q9BYQ7 146 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 C20orf27Q9GZN8 174 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 COMMD5Q9GZQ3 224 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 SLC39A9Q9NUM3 307 aa0.5□□□□□ -2.33
TRAJ41-201ENST00000390496 PCF11O94913 1555 aaKnown RBP0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 TOPBP1Q92547 1522 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 PIK3C2GO75747 1445 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 ALPK3Q96L96 1907 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 C2orf70A6NJV1 201 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 FAM159BA6NKW6 160 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 B4DSR2 109 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 PIRO00625 290 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 OR7C1O76099 320 aaPredicted RBP0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 C8GP07360 202 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 CST2P09228 141 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 METTL15P1P0C7V9 234 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 MGST1P10620 155 aaKnown RBP0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 SSR2P43308 183 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 ATP5G3P48201 142 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 REEP5Q00765 189 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 ELOBQ15370 118 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 KHDC3LQ587J8 217 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 UNQ6190/PRO20217Q6UXQ8 127 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 ZNF826PQ6ZT77 177 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 AAED1Q7RTV5 226 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 Q8IYB0 196 aa0.49□□□□□ -2.33
TRAJ41-201ENST00000390496 HIST3H2BBQ8N257 126 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms