RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 FAM90A10PA6NDY2 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 FAM90A18PA6NE21 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 FAM90A16PA6NEW6 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 FAM90A20PA6NIJ5 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 FAM90A8PA6NJQ4 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 FAM90A7PA6NKC0 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 FAM90A22PA8MWA6 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 FAM90A12PA8MX19 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 FAM90A5PA8MXJ8 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 FAM90A23PA8MXZ1 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 FAM90A15PP0C7V4 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 FAM90A13PP0C7W8 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 FAM90A14PP0C7W9 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 FAM90A24PP0C7X0 464 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 MORN2Q502X0 79 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 ZNF324BQ6AW86 544 aaPredicted RBP4.15□□□□□ -1.74
LTN1-202ENST00000389194 TMEM219Q86XT9 240 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 SAXO1Q8IYX7 474 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 NEUROG1Q92886 237 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 SEPSECSQ9HD40 501 aaKnown RBP4.15□□□□□ -1.74
LTN1-202ENST00000389194 IGHV1-18A0A0C4DH31 117 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 GCGP01275 180 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 DLX6P56179 175 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 CLEC2AQ6UVW9 174 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 EXOC3-AS1Q8N2X6 119 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 RPRMLQ8N4K4 120 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 OR10J6PQ8NGY7 276 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 OR52E5Q8NH55 327 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 ZFP30Q9Y2G7 519 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 MKI67P46013 3256 aaKnown RBP4.15□□□□□ -1.74
LTN1-202ENST00000389194 NPIPB13A6NJU9 1138 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 NPIPB4C9JG80 1138 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 CEACAM1P13688 526 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 SRSF4Q08170 494 aaKnown RBP4.15□□□□□ -1.75
LTN1-202ENST00000389194 ZNF146Q15072 292 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 FBLN7Q53RD9 439 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 EIF4E3Q8N5X7 224 aaKnown RBP4.15□□□□□ -1.75
LTN1-202ENST00000389194 CRIM1Q9NZV1 1036 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 UQCR10Q9UDW1 63 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 RAXQ9Y2V3 346 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 DMRT1Q9Y5R6 373 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 PEX7O00628 323 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 GFRA3O60609 400 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 NDUFA3O95167 84 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 TIMP3P35625 211 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 ZNF56Q15929 161 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 ZNF497Q6ZNH5 498 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 ZNF418Q8TF45 676 aaPredicted RBP4.15□□□□□ -1.75
LTN1-202ENST00000389194 SMDT1Q9H4I9 107 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 HIVEP3Q5T1R4 2406 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 FRMPD3Q5JV73 1810 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 A0A0U1RRA0 63 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 LINC00473A8K010 186 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 COLCA2A8K830 154 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 IL18BPO95998 194 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 IGKV1-5P01602 117 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 TRGV3P03979 118 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 FOLR2P14207 255 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 TMEM136Q6ZRR5 245 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 RPP25LQ8N5L8 163 aaKnown RBP4.15□□□□□ -1.75
LTN1-202ENST00000389194 TUBA4BQ9H853 241 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 MED12LQ86YW9 2145 aa4.15□□□□□ -1.75
LTN1-202ENST00000389194 IGLV3-12A0A075B6K2 115 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 IGHV3-64A0A075B6Q5 118 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 SLC25A34Q6PIV7 304 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 Q9H3A6 140 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 FBXL7Q9UJT9 491 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 NAV3Q8IVL0 2385 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 EML6Q6ZMW3 1958 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 ZNF729A6NN14 1252 aaPredicted RBP4.14□□□□□ -1.75
LTN1-202ENST00000389194 FAM90A26D6RGX4 464 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 HOXA5P20719 270 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 CRYGSP22914 178 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 PCP4P48539 62 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 PLP1P60201 277 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 SELENOTP62341 195 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 COTL1Q14019 142 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 TIMM23BQ5SRD1 257 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 FAM89BQ8N5H3 189 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 SEMA5BQ9P283 1151 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 A6NDN8 102 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 LIPFP07098 398 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 COX5BP10606 129 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 RPL15P61313 204 aaKnown RBP4.14□□□□□ -1.75
LTN1-202ENST00000389194 TBR1Q16650 682 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 PRSS8Q16651 343 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 CCDC144NLQ6NUI1 221 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 DUX4L9Q6RFH8 374 aaPredicted RBP4.14□□□□□ -1.75
LTN1-202ENST00000389194 REC114Q7Z4M0 266 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 IL36BQ9NZH7 164 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 PLXNA3P51805 1871 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 EFNB3Q15768 340 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 LINC00470Q9BZP3 86 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 TLN2Q9Y4G6 2542 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.14□□□□□ -1.75
LTN1-202ENST00000389194 NCR2O95944 276 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 IGLV3-19P01714 112 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 HBBP68871 147 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 TMEM170BQ5T4T1 132 aa4.14□□□□□ -1.75
LTN1-202ENST00000389194 FAM90A1Q86YD7 464 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms