RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 ACOX3O15254 700 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 HYPMO75409 117 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 HIST1H2BOP23527 126 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 RPS12P25398 132 aaKnown RBP0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 HIST1H2BBP33778 126 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 AP2S1P53680 142 aaPredicted RBP0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 HIST1H2BDP58876 126 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 HIST1H2BCP62807 126 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 KCNJ8Q15842 424 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 GUK1Q16774 197 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 HIST2H2BEQ16778 126 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 ZNF826PQ6ZT77 177 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 OOSP2Q86WS3 158 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 OR2T4Q8NH00 348 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 HIST1H2BHQ93079 126 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 HIST1H2BNQ99877 126 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 HIST1H2BMQ99879 126 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 WDR61Q9GZS3 305 aaKnown RBP0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 COL12A1Q99715 3063 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 RELNP78509 3460 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 DSPP15924 2871 aaKnown RBP0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 PRRC2CQ9Y520 2896 aaKnown RBP0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 CELSR1Q9NYQ6 3014 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 EP400Q96L91 3159 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 OTOGQ6ZRI0 2925 aa0.61□□□□□ -2.31
RNU6-39P-201ENST00000384344 SPTBN5Q9NRC6 3674 aaKnown RBP0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 CEP290O15078 2479 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 PIK3R4Q99570 1358 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 LOC110117498A0A087WWA1 95 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 EVPLLA8MZ36 301 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 FADS1O60427 444 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 TPM3P06753 285 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 KRTAP2-3P0C7H8 128 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 ASAH2BP0C7U1 165 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 CRYBG3Q68DQ2 2970 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 BPIFA4PQ86YQ2 179 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 C1orf158Q8N1D5 194 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 OR4E2Q8NGC2 313 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 SLC50A1Q9BRV3 221 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 DERL1Q9BUN8 251 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 KRTAP2-4Q9BYR9 128 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 COMMD5Q9GZQ3 224 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 NKIRAS1Q9NYS0 192 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 DMBT1Q9UGM3 2413 aaPredicted RBP0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 ALPK2Q86TB3 2170 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 EVC2Q86UK5 1308 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 UNC80Q8N2C7 3258 aa0.6□□□□□ -2.31
RNU6-39P-201ENST00000384344 USH2AO75445 5202 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 FAM186AA6NE01 2351 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 C9orf84Q5VXU9 1444 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 DCTN3O75935 186 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 CLPSP04118 112 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 ISG15P05161 165 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 ZNF93P35789 620 aaPredicted RBP0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 RAB4BP61018 213 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 RAB5BP61020 215 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 TPM4P67936 248 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 HIST2H3PS2Q5TEC6 136 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 Q6ZS49 121 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 LINC00311Q8N616 119 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 Q8N814 137 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 MRPL30Q8TCC3 161 aaKnown RBP0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 OPTNQ96CV9 577 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 ULBP3Q9BZM4 244 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 MIXL1Q9H2W2 232 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 CISHQ9NSE2 258 aa0.59□□□□□ -2.31
RNU6-39P-201ENST00000384344 WDR87Q6ZQQ6 2873 aa0.59□□□□□ -2.32
RNU6-39P-201ENST00000384344 ZFHX3Q15911 3703 aa0.59□□□□□ -2.32
RNU6-39P-201ENST00000384344 HIVEP1P15822 2718 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 OR1I1O60431 355 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 TCL1BO95988 128 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 OR5G3P0C626 314 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 FKBP2P26885 142 aaKnown RBP0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 TCL1AP56279 114 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 HBA1P69905 142 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 KHDC3LQ587J8 217 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 LPCAT3Q6P1A2 487 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 CD200R1LQ6Q8B3 271 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 LRRC25Q8N386 305 aaPredicted RBP0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 TMEM156Q8N614 296 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 OR13C4Q8NGS5 318 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 PFN4Q8NHR9 129 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 DNAJC9Q8WXX5 260 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 MRPS26Q9BYN8 205 aaKnown RBP0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 ACER3Q9NUN7 267 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 ZFP30Q9Y2G7 519 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 ACANP16112 2415 aa0.58□□□□□ -2.32
RNU6-39P-201ENST00000384344 CACNA1HO95180 2353 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 C5orf42Q9H799 3197 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 APCP25054 2843 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 NIPBLQ6KC79 2804 aaeCLIP0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 RIC1Q4ADV7 1423 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 COL7A1Q02388 2944 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 INMT-MINDY4F8WBC2 141 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 OR2T1O43869 369 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 IFNA10P01566 189 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 CTSDP07339 412 aaPredicted RBP0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 BAALC-AS2P0C853 105 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 COX6A1P12074 109 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms